Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_L11
         (380 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL591042-2|CAI14458.1|  753|Homo sapiens vav 3 oncogene protein.       29   6.6  
AL591042-1|CAI14457.1|  847|Homo sapiens vav 3 oncogene protein.       29   6.6  
AL513206-2|CAH73196.1|  753|Homo sapiens vav 3 oncogene protein.       29   6.6  
AL513206-1|CAH73195.1|  847|Homo sapiens vav 3 oncogene protein.       29   6.6  
AL391235-1|CAH72458.1|  847|Homo sapiens vav 3 oncogene protein.       29   6.6  
AL353892-1|CAI21786.1|  847|Homo sapiens vav 3 oncogene protein.       29   6.6  
AF118887-1|AAD20349.1|  847|Homo sapiens VAV-3 protein protein.        29   6.6  
AF118886-1|AAD20348.1|  753|Homo sapiens VAV-3 protein beta isof...    29   6.6  
AF067817-1|AAC79695.1|  847|Homo sapiens VAV-3 protein protein.        29   6.6  

>AL591042-2|CAI14458.1|  753|Homo sapiens vav 3 oncogene protein.
          Length = 753

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -2

Query: 133 NIAPRYYEYNLR-CKINKLKRVTVRTFCKTFLRMTRFAKFVCFQ 5
           NI P Y + N    K++   RVT    C+  LR T +  ++CF+
Sbjct: 409 NIRPDYADSNFHDFKMHTFTRVTSCKVCQMLLRGTFYQGYLCFK 452


>AL591042-1|CAI14457.1|  847|Homo sapiens vav 3 oncogene protein.
          Length = 847

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -2

Query: 133 NIAPRYYEYNLR-CKINKLKRVTVRTFCKTFLRMTRFAKFVCFQ 5
           NI P Y + N    K++   RVT    C+  LR T +  ++CF+
Sbjct: 503 NIRPDYADSNFHDFKMHTFTRVTSCKVCQMLLRGTFYQGYLCFK 546


>AL513206-2|CAH73196.1|  753|Homo sapiens vav 3 oncogene protein.
          Length = 753

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -2

Query: 133 NIAPRYYEYNLR-CKINKLKRVTVRTFCKTFLRMTRFAKFVCFQ 5
           NI P Y + N    K++   RVT    C+  LR T +  ++CF+
Sbjct: 409 NIRPDYADSNFHDFKMHTFTRVTSCKVCQMLLRGTFYQGYLCFK 452


>AL513206-1|CAH73195.1|  847|Homo sapiens vav 3 oncogene protein.
          Length = 847

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -2

Query: 133 NIAPRYYEYNLR-CKINKLKRVTVRTFCKTFLRMTRFAKFVCFQ 5
           NI P Y + N    K++   RVT    C+  LR T +  ++CF+
Sbjct: 503 NIRPDYADSNFHDFKMHTFTRVTSCKVCQMLLRGTFYQGYLCFK 546


>AL391235-1|CAH72458.1|  847|Homo sapiens vav 3 oncogene protein.
          Length = 847

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -2

Query: 133 NIAPRYYEYNLR-CKINKLKRVTVRTFCKTFLRMTRFAKFVCFQ 5
           NI P Y + N    K++   RVT    C+  LR T +  ++CF+
Sbjct: 503 NIRPDYADSNFHDFKMHTFTRVTSCKVCQMLLRGTFYQGYLCFK 546


>AL353892-1|CAI21786.1|  847|Homo sapiens vav 3 oncogene protein.
          Length = 847

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -2

Query: 133 NIAPRYYEYNLR-CKINKLKRVTVRTFCKTFLRMTRFAKFVCFQ 5
           NI P Y + N    K++   RVT    C+  LR T +  ++CF+
Sbjct: 503 NIRPDYADSNFHDFKMHTFTRVTSCKVCQMLLRGTFYQGYLCFK 546


>AF118887-1|AAD20349.1|  847|Homo sapiens VAV-3 protein protein.
          Length = 847

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -2

Query: 133 NIAPRYYEYNLR-CKINKLKRVTVRTFCKTFLRMTRFAKFVCFQ 5
           NI P Y + N    K++   RVT    C+  LR T +  ++CF+
Sbjct: 503 NIRPDYADSNFHDFKMHTFTRVTSCKVCQMLLRGTFYQGYLCFK 546


>AF118886-1|AAD20348.1|  753|Homo sapiens VAV-3 protein beta isoform
           protein.
          Length = 753

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -2

Query: 133 NIAPRYYEYNLR-CKINKLKRVTVRTFCKTFLRMTRFAKFVCFQ 5
           NI P Y + N    K++   RVT    C+  LR T +  ++CF+
Sbjct: 409 NIRPDYADSNFHDFKMHTFTRVTSCKVCQMLLRGTFYQGYLCFK 452


>AF067817-1|AAC79695.1|  847|Homo sapiens VAV-3 protein protein.
          Length = 847

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -2

Query: 133 NIAPRYYEYNLR-CKINKLKRVTVRTFCKTFLRMTRFAKFVCFQ 5
           NI P Y + N    K++   RVT    C+  LR T +  ++CF+
Sbjct: 503 NIRPDYADSNFHDFKMHTFTRVTSCKVCQMLLRGTFYQGYLCFK 546


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,078,022
Number of Sequences: 237096
Number of extensions: 939025
Number of successful extensions: 2046
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2046
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2526356360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)