Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_L11
         (380 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF040642-2|AAN73874.2|  411|Caenorhabditis elegans Hypothetical ...    28   2.6  
Z83109-1|CAB05513.1|  339|Caenorhabditis elegans Hypothetical pr...    27   3.4  
U23177-2|AAA64331.2|  538|Caenorhabditis elegans Hypothetical pr...    27   3.4  
Z81576-6|CAD54151.1|  294|Caenorhabditis elegans Hypothetical pr...    27   4.5  
Z75711-6|CAB00037.3|  387|Caenorhabditis elegans Hypothetical pr...    27   6.0  
U64844-12|AAB18312.4|  417|Caenorhabditis elegans Hypothetical p...    27   6.0  
U29612-4|AAA68803.1|  326|Caenorhabditis elegans Hypothetical pr...    26   7.9  

>AF040642-2|AAN73874.2|  411|Caenorhabditis elegans Hypothetical
           protein C50D2.9 protein.
          Length = 411

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
 Frame = +1

Query: 85  YLFCNVNCIRNNEELCLDYY-KNDEIYDLNGLLGTTYAVYFWPPNQRQREDCEVINFKKL 261
           YL+C V  I    E CL Y  +N E Y++  +     +  F   + RQ E       K  
Sbjct: 260 YLYCGVRVI-GGSETCLKYLEENQEKYNIQVMKRLAVSAAF---HTRQMESAVEQVAKAF 315

Query: 262 NSQEVYQAGNNCYRLHLSSEQSIVMGTYKNSTGKIVN 372
            + E+++   N +  +     S   G  + +  K +N
Sbjct: 316 QNVEIHRPVCNVWSNYSGKVMSSKKGDVRGAVAKQIN 352


>Z83109-1|CAB05513.1|  339|Caenorhabditis elegans Hypothetical
           protein F44G3.1 protein.
          Length = 339

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -1

Query: 368 TIFPVLFLYVPITI 327
           TI P++F+Y+P+TI
Sbjct: 259 TIIPIIFMYIPVTI 272


>U23177-2|AAA64331.2|  538|Caenorhabditis elegans Hypothetical
           protein C56G2.4 protein.
          Length = 538

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +1

Query: 58  MCVQLLALVYLFCNVNCIRNNEELCLDYYK 147
           M +Q+L L+ LFC+V  +  + E C++  K
Sbjct: 1   MNLQILLLLLLFCHVAAVCRDTETCIERVK 30


>Z81576-6|CAD54151.1|  294|Caenorhabditis elegans Hypothetical
           protein R10E8.8 protein.
          Length = 294

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 23/90 (25%), Positives = 42/90 (46%)
 Frame = +1

Query: 109 IRNNEELCLDYYKNDEIYDLNGLLGTTYAVYFWPPNQRQREDCEVINFKKLNSQEVYQAG 288
           + +++   L+ + N+E+      +  TY + F    +   +  E  N K  NS   YQ  
Sbjct: 179 VEHHQIQALENFVNNELKSYKTGIDYTYKLTFSDEVKLLGQTLER-NLKVKNSAP-YQTQ 236

Query: 289 NNCYRLHLSSEQSIVMGTYKNSTGKIVNLL 378
            +   +HL+++QSI+         +IVNLL
Sbjct: 237 KSNTEMHLNTQQSILYDMPDLVIDRIVNLL 266


>Z75711-6|CAB00037.3|  387|Caenorhabditis elegans Hypothetical
           protein K02B12.8 protein.
          Length = 387

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 16/63 (25%), Positives = 31/63 (49%)
 Frame = +1

Query: 85  YLFCNVNCIRNNEELCLDYYKNDEIYDLNGLLGTTYAVYFWPPNQRQREDCEVINFKKLN 264
           ++FC   C + +  +CL   KN  +  L+G + +   +YF  P +   +    I  KK++
Sbjct: 25  HIFCT-KCAKADLAVCLICKKNVRLVRLDGNISSGIKIYFADPIKMVADSLAKIQ-KKID 82

Query: 265 SQE 273
            Q+
Sbjct: 83  FQQ 85


>U64844-12|AAB18312.4|  417|Caenorhabditis elegans Hypothetical
           protein T22F3.10 protein.
          Length = 417

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 296 VIVYICHPSNRLLWVHTRIVLGKLSI 373
           V +++   SNRL W+   +VLG L I
Sbjct: 363 VAIFVSDESNRLQWLWVHLVLGCLMI 388


>U29612-4|AAA68803.1|  326|Caenorhabditis elegans Hypothetical
           protein C09B8.5 protein.
          Length = 326

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = +1

Query: 256 KLNSQEVYQAGNNCYRLHLSSEQSIVMGTYKNST 357
           ++N ++    G NC  + +  E+ +V+  YK  T
Sbjct: 254 RINVRKTNWKGRNCLTIDMEGEKELVISWYKTGT 287


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,685,393
Number of Sequences: 27780
Number of extensions: 162098
Number of successful extensions: 543
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 567749674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)