Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_L06
(533 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 68 5e-12
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 55 3e-08
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 51 6e-07
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 51 6e-07
U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical pr... 32 0.23
Z83120-9|CAB05589.2| 773|Caenorhabditis elegans Hypothetical pr... 32 0.30
Z81515-11|CAB04199.2| 773|Caenorhabditis elegans Hypothetical p... 32 0.30
AF011893-1|AAC27124.1| 773|Caenorhabditis elegans maternal-effe... 32 0.30
AL032660-2|CAA21751.1| 690|Caenorhabditis elegans Hypothetical ... 31 0.52
U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical pr... 31 0.69
AL032660-1|CAA21752.1| 711|Caenorhabditis elegans Hypothetical ... 30 0.91
U39993-2|AAK72059.1| 744|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z82288-1|CAB05322.2| 479|Caenorhabditis elegans Hypothetical pr... 29 2.1
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 29 2.1
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical pr... 28 4.8
U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical pr... 27 6.4
U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical pr... 27 6.4
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 27 6.4
AF100670-1|AAN73858.1| 420|Caenorhabditis elegans Puf (pumilio/... 27 6.4
AL021475-1|CAA16312.1| 758|Caenorhabditis elegans Hypothetical ... 27 8.5
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 67.7 bits (158), Expect = 5e-12
Identities = 41/129 (31%), Positives = 54/129 (41%), Gaps = 5/129 (3%)
Frame = +1
Query: 109 PPPLCICGKIYSPVCGSDGKTYENPCEFDCEKDKTHSNMTIVKNTACEVGIPCYCTLEYA 288
PPP C C + PVCG+D TY N C C + + T C+ C
Sbjct: 15 PPPDCDCPSVIRPVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTCCD---KKECEKVGT 71
Query: 289 PVCGSNGKTYANKC---SLECTQKIIPSLKME--HDGECQGAKLASLHPCICTREKDPVC 453
P+C + G+T+ N C +C K L + H G C H C T E DPVC
Sbjct: 72 PICDNFGETHINDCHFAQFQCIMKKSMGLSLTKLHMGRCSSKDCN--HNCTNT-EFDPVC 128
Query: 454 GSDGVTYSN 480
++G Y N
Sbjct: 129 DTNGSVYRN 137
Score = 66.9 bits (156), Expect = 9e-12
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 13/131 (9%)
Frame = +1
Query: 127 CGKIYSPVCGSDGKTYENPCEFD---CEKDKTHSN-MTIVKNTACEVGIPC--YCTLEYA 288
C +SPVC S G T++N C F C ++T + +TI K C C C EY+
Sbjct: 818 CPSDFSPVCDSKGSTHQNICHFGVKRCIAERTFGDVLTIDKFEVCNEVKECNNACPKEYS 877
Query: 289 PVCGSNGKTYANKCSLECTQKIIPS-------LKMEHDGECQGAKLASLHPCICTREKDP 447
PVC SNG+ N+C L+ + ++ + L ++DGEC + C + P
Sbjct: 878 PVCASNGQNIVNECELDKIRCLVENNVTTGDKLVKDYDGEC-----CRIENCDIS-VFSP 931
Query: 448 VCGSDGVTYSN 480
VC ++GVT++N
Sbjct: 932 VCDTEGVTHAN 942
Score = 54.4 bits (125), Expect = 5e-08
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 12/130 (9%)
Frame = +1
Query: 127 CGKIYSPVCGSDGKTYENPCEFDCEKDKTHSNMTIVKNTACEVGIPCYCTLE------YA 288
C K YSPVC S+G+ N CE D + +N+T + C C +E ++
Sbjct: 872 CPKEYSPVCASNGQNIVNECELDKIRCLVENNVTTGDKLVKDYDGEC-CRIENCDISVFS 930
Query: 289 PVCGSNGKTYANKCSLE---CTQ--KIIPSLKMEHDGECQGAKLASLHPCICTREKDPVC 453
PVC + G T+AN C ++ C Q K ++++ + G+C C +K PVC
Sbjct: 931 PVCDTEGVTHANMCLMDQNACIQMKKNKKTIQVSYQGQCCNQP--------CDEDKTPVC 982
Query: 454 GSDG-VTYSN 480
DG +T+ N
Sbjct: 983 --DGTITHPN 990
Score = 49.6 bits (113), Expect = 1e-06
Identities = 33/124 (26%), Positives = 51/124 (41%), Gaps = 6/124 (4%)
Frame = +1
Query: 127 CGKIYSPVCGSDGKTYENPCEFDCE-KDKTHSNMTIVKNTACEVGIPCYCTLEYAPVCGS 303
C Y P+CG++G T+ N C E + +S + + C C +++PVC S
Sbjct: 772 CDNSYDPLCGTNGVTFTNACSLQKEICESANSTIEVAYTGMC---CDTNCPSDFSPVCDS 828
Query: 304 NGKTYANKCSLECTQKIIPS-----LKMEHDGECQGAKLASLHPCICTREKDPVCGSDGV 468
G T+ N C + I L ++ C K + C +E PVC S+G
Sbjct: 829 KGSTHQNICHFGVKRCIAERTFGDVLTIDKFEVCNEVKECN---NACPKEYSPVCASNGQ 885
Query: 469 TYSN 480
N
Sbjct: 886 NIVN 889
Score = 45.2 bits (102), Expect = 3e-05
Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 18/136 (13%)
Frame = +1
Query: 127 CGKIYSPVCGSDGKTYENPCEFD---CEKDKTH-SNMTIVKNTACEVG----IPCYCTLE 282
C K + PVC + +T++N C+F C+ +K S + I + AC I C +
Sbjct: 257 CDKSWDPVCDTRNRTHKNVCQFKFFACKINKIDGSVIDIAHSGACRARKSTCITCPKDEK 316
Query: 283 YAPVCGSNGKTYANKCSL----------ECTQKIIPSLKMEHDGECQGAKLASLHPCICT 432
P+C + T+ CS E ++++ +K H+ Q + P C+
Sbjct: 317 KIPICDNRNMTHPTLCSFIQYNCEARNNEDEERVLVHIKSCHERSPQFTLKDEICPRTCS 376
Query: 433 REKDPVCGSDGVTYSN 480
R+ PVC T+ N
Sbjct: 377 RDVKPVCDEANNTHQN 392
Score = 44.0 bits (99), Expect = 7e-05
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +1
Query: 118 LCICGKIYSPVCGSDGKTYENPCEF---DCEKDKTHSNMTIVKNTACEVGIPCYCTLEYA 288
L C K PVC S G+T+++ C F C DK H+ T + P CT E +
Sbjct: 1070 LASCPKTGQPVCDSRGRTHDSLCHFHNSKCIFDKIHTQNTTLTLDYQGKCCPAGCTDELS 1129
Query: 289 PVCGSNGKTYANKC 330
+C + Y N C
Sbjct: 1130 VICDQHENIYRNSC 1143
Score = 41.9 bits (94), Expect = 3e-04
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 9/120 (7%)
Frame = +1
Query: 145 PVCGSDGKTYENPCEFDCEK----DKTHS-NMTIVKNTACEVGIPCYCTLEYAPVCGSNG 309
PVC S G + N CEF + K H ++ +N + CT + P+C S+
Sbjct: 543 PVCDSAGNLHGNLCEFTYSRCIAASKGHQIHIATEENCISKEACQMPCTDDKHPICASDF 602
Query: 310 KTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKDP----VCGSDGVTYS 477
TY N C + + L++ G+C L S PC E P VC D T S
Sbjct: 603 STYENLCQFRKQKCLDSELEVLFKGKCSEC-LDS--PCALPAENSPDESFVCLEDQSTKS 659
Score = 40.7 bits (91), Expect = 6e-04
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Frame = +1
Query: 127 CGKIYSPVCGSDGKTYENPC---EFDCEKDKTHS-NMTIVKNTACEVGIPCY--CT-LEY 285
C K+ +P+C + G+T+ N C +F C K+ ++T + C C CT E+
Sbjct: 66 CEKVGTPICDNFGETHINDCHFAQFQCIMKKSMGLSLTKLHMGRCS-SKDCNHNCTNTEF 124
Query: 286 APVCGSNGKTYANKC 330
PVC +NG Y N C
Sbjct: 125 DPVCDTNGSVYRNLC 139
Score = 36.7 bits (81), Expect = 0.010
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +1
Query: 271 CTLEYAPVCGSNGKTYANKCSLECTQKIIPS----LKMEHDGECQGAKLASLHPCICTRE 438
C + PVC S G + N C ++ I S + + + C +K A PC T +
Sbjct: 537 CPTDGQPVCDSAGNLHGNLCEFTYSRCIAASKGHQIHIATEENCI-SKEACQMPC--TDD 593
Query: 439 KDPVCGSDGVTYSN 480
K P+C SD TY N
Sbjct: 594 KHPICASDFSTYEN 607
Score = 36.3 bits (80), Expect = 0.014
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 10/120 (8%)
Frame = +1
Query: 145 PVCGSDGKTYENPCEFDCEKDKTHSNMTIVKNTACE-VGIPCYCTLEYAP----VCGSNG 309
P+C SD TYEN C+F +K + K E + PC E +P VC +
Sbjct: 596 PICASDFSTYENLCQFRKQKCLDSELEVLFKGKCSECLDSPCALPAENSPDESFVCLEDQ 655
Query: 310 KTYANKCSLECTQKIIP-----SLKMEHDGECQGAKLASLHPCICTREKDPVCGSDGVTY 474
T + C + I +L +++ G C + C T + DPVC G T+
Sbjct: 656 ST-KSLCEYQMLSCIFERGYGVNLTVQYIGVC----CPPVESC-DTEKPDPVCTDSGATF 709
Score = 36.3 bits (80), Expect = 0.014
Identities = 39/156 (25%), Positives = 59/156 (37%), Gaps = 33/156 (21%)
Frame = +1
Query: 112 PPLCICG-KIYSPVCGSDGKTYENPCEFDCE----KDKTHSNMTIVKNTACEVGI----- 261
PP+ C + PVC G T+ CE + E K + +V CE +
Sbjct: 688 PPVESCDTEKPDPVCTDSGATFLTECELNIENCKLKKLDQPKLVVVSQGICEKDMLTDDF 747
Query: 262 -----------------PCYCTLE----YAPVCGSNGKTYANKCSL--ECTQKIIPSLKM 372
C++E Y P+CG+NG T+ N CSL E + ++++
Sbjct: 748 SSNRNFQKPNIEFKRENTFNCSMECDNSYDPLCGTNGVTFTNACSLQKEICESANSTIEV 807
Query: 373 EHDGECQGAKLASLHPCICTREKDPVCGSDGVTYSN 480
+ G C C + PVC S G T+ N
Sbjct: 808 AYTGMCCDTN--------CPSDFSPVCDSKGSTHQN 835
Score = 33.9 bits (74), Expect = 0.074
Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 2/113 (1%)
Frame = +1
Query: 148 VCGSDGKTYENPCEFDCEK--DKTHSNMTIVKNTACEVGIPCYCTLEYAPVCGSNGKTYA 321
VC S+G+T+ N C + + +T S T+ E C PVC S G+T+
Sbjct: 1030 VCDSEGQTHMNHCVYQQRRCMAQTISQKTLNIVHTGECCALASCPKTGQPVCDSRGRTHD 1089
Query: 322 NKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKDPVCGSDGVTYSN 480
+ C ++ I + ++ + P CT E +C Y N
Sbjct: 1090 SLCHFHNSKCIFDKIHTQNTTLTLDYQ-GKCCPAGCTDELSVICDQHENIYRN 1141
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 55.2 bits (127), Expect = 3e-08
Identities = 38/128 (29%), Positives = 52/128 (40%), Gaps = 4/128 (3%)
Frame = +1
Query: 109 PPPLCICGKIYSPVCGSDGK---TYENPCEFDCEKDKTHSNMTIVKNTACEVGIPCYCTL 279
P C C PVC +G TY N C F C ++ + + + + C YC +
Sbjct: 21 PNSTCSCKPEIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSCCSAR---YCNM 77
Query: 280 EYAPVCGSNGKTYANKCSLECTQKIIPSLKMEH-DGECQGAKLASLHPCICTREKDPVCG 456
PVC S G+ Y C E Q I L H + K + P C E +PVC
Sbjct: 78 FEQPVC-SEGQMYQTVCEFEERQCIEFKLFKNHISMDSSQEKCSCTAP--CPTEWNPVCD 134
Query: 457 SDGVTYSN 480
G T++N
Sbjct: 135 KKGQTHAN 142
Score = 50.4 bits (115), Expect = 8e-07
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Frame = +1
Query: 127 CGKIYSPVCGSDGKTYENPCEFD---CEKDKTHSNMTIVKNTACEVGIPCYCTLEYAPVC 297
C PVC S+G+ Y+ CEF+ C + K N + ++ + C E+ PVC
Sbjct: 75 CNMFEQPVC-SEGQMYQTVCEFEERQCIEFKLFKNHISMDSSQEKCSCTAPCPTEWNPVC 133
Query: 298 GSNGKTYANKCSL---ECTQK--IIPSLKMEHDGECQGAKLASLHPCICTREKDPVCGSD 462
G+T+AN C+ +C K + SL++++ G C C + VC S+
Sbjct: 134 DKKGQTHANFCTFLNSKCYHKNQLNESLEVDYSGVC------CEDMCSAGQTSLTVCDSE 187
Query: 463 GVTYSN 480
G T+++
Sbjct: 188 GNTHTD 193
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 50.8 bits (116), Expect = 6e-07
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 24/117 (20%)
Frame = +1
Query: 127 CGKIYSPVCGSDGKTYENPCEFDCEKDKTHSNMTIVKNTACEVGI--------------- 261
C + PVC ++G+T++N CE + +T S + + C +G+
Sbjct: 397 CEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGVCATFDSCKKPQVCVV 456
Query: 262 -----PCY---CTLEYAPVCGSNGKTYANKCSLECTQKII-PSLKMEHDGECQGAKL 405
C CT E+ VCGS+GKTY+N+C L+ + ++ ++++ C+ KL
Sbjct: 457 VDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKL 513
Score = 50.0 bits (114), Expect = 1e-06
Identities = 47/158 (29%), Positives = 62/158 (39%), Gaps = 47/158 (29%)
Frame = +1
Query: 148 VCGSDGKTYENPCEFDCEKDKTHSNMTIVKNTAC-EVGIPCY------------------ 270
VCG+DGKTY N C K ++ + K C E G PC
Sbjct: 330 VCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCVVKPDRTA 389
Query: 271 -------CTLEYAPVCGSNGKTYANKCSLE---CTQKIIPSLKMEHDGECQGAKLASLHP 420
C PVC +NG+T+ N+C ++ C K + +K++H G C A+
Sbjct: 390 ECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSM--IKVKHQGTCGIGVCATFDS 447
Query: 421 C------------------ICTREKDPVCGSDGVTYSN 480
C CT E VCGSDG TYSN
Sbjct: 448 CKKPQVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSN 485
Score = 47.6 bits (108), Expect = 6e-06
Identities = 42/127 (33%), Positives = 51/127 (40%), Gaps = 5/127 (3%)
Frame = +1
Query: 115 PLCICGKI---YSPVCGSDGKTYENPCEFDCEKDKTHSNMTIVKNTACEVG--IPCYCTL 279
P C+C + VCGSDGKTY N C N+ + N+ACE C
Sbjct: 461 PKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKEKCDF 520
Query: 280 EYAPVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKDPVCGS 459
A V G N K KC +C PS +ME E VCG+
Sbjct: 521 YSACVVGENEKAEC-KCPDDC-----PSYEMEEGKE--------------------VCGT 554
Query: 460 DGVTYSN 480
DGVTYS+
Sbjct: 555 DGVTYSS 561
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 22/88 (25%)
Frame = +1
Query: 142 SPVCGSDGKTYENPCEFDCEKDKTHSNMTI--------------VKNTACEVGI----PC 267
SPVC S G Y++ C ++ +N+T+ C++G+ C
Sbjct: 258 SPVCSSHGVDYQSSCHLRHHACESKTNITVKFFGRCDPCHGHKCPNGQTCQLGVDRRPEC 317
Query: 268 ----YCTLEYAPVCGSNGKTYANKCSLE 339
CT+ A VCG++GKTY N+C L+
Sbjct: 318 KCSEQCTMNSAHVCGTDGKTYLNECFLK 345
Score = 34.3 bits (75), Expect = 0.056
Identities = 35/125 (28%), Positives = 47/125 (37%), Gaps = 24/125 (19%)
Frame = +1
Query: 178 NPCE-FDCEKDK----THSNMTIVKNTACEVGIPCYC-TLEYAPVCGSNGKTYANKCSLE 339
NPCE C + N ++ C P Y ++E +PVC S+G Y + C L
Sbjct: 216 NPCEDLRCGPGEDCVVNQINGILLAKCVCPTQCPNYGDSVESSPVCSSHGVDYQSSCHLR 275
Query: 340 ---CTQKIIPSLK-MEHDGECQGAKLASLHPC--------------ICTREKDPVCGSDG 465
C K ++K C G K + C CT VCG+DG
Sbjct: 276 HHACESKTNITVKFFGRCDPCHGHKCPNGQTCQLGVDRRPECKCSEQCTMNSAHVCGTDG 335
Query: 466 VTYSN 480
TY N
Sbjct: 336 KTYLN 340
Score = 34.3 bits (75), Expect = 0.056
Identities = 41/157 (26%), Positives = 57/157 (36%), Gaps = 46/157 (29%)
Frame = +1
Query: 148 VCGSDGKTYENPCEFDCEKDKTHSNMTIVK----------NTACEVGIPC---YCTLEY- 285
VCG+DG TY + C +K H + ++ + C G C C Y
Sbjct: 551 VCGTDGVTYSSECHM--KKSACHQSKFVMTAFEGKCDECLHVQCRYGEECRSGVCVCSYN 608
Query: 286 --------APVCGSNGKTYANKCSLECT--QKIIPSLKMEHDGECQGAKL---------- 405
A +CG NG Y + C L+ QK P +M C +K
Sbjct: 609 CPANPPLSARICGENGVLYPSLCHLQLASCQKGAPISEMP-PSHCHSSKTSFPDFKVRRP 667
Query: 406 ------ASLHPCICT------REKDPVCGSDGVTYSN 480
A+ H CT P+CGSDG+ Y+N
Sbjct: 668 CACYFGATCHNWACTCPTCNLSSNYPICGSDGIVYNN 704
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 115 PLCICGKIYSPVCGSDGKTYENPCEFD 195
P C Y P+CGSDG Y N C +
Sbjct: 684 PTCNLSSNY-PICGSDGIVYNNQCHLN 709
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 148 VCGSDGKTYENPCE 189
VCGSDG TY N CE
Sbjct: 880 VCGSDGTTYSNLCE 893
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 10/57 (17%)
Frame = +1
Query: 196 CEKDKTH-SNMTIVKNTACEVGIPCY---CTLEYA------PVCGSNGKTYANKCSL 336
C KT + + + AC G C+ CT P+CGS+G Y N+C L
Sbjct: 652 CHSSKTSFPDFKVRRPCACYFGATCHNWACTCPTCNLSSNYPICGSDGIVYNNQCHL 708
Score = 28.3 bits (60), Expect = 3.7
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 292 VCGSNGKTYANKCSLE 339
VCGS+G TY+N C L+
Sbjct: 880 VCGSDGTTYSNLCELK 895
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1
Query: 448 VCGSDGVTYSN 480
VCGSDG TYSN
Sbjct: 880 VCGSDGTTYSN 890
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 50.8 bits (116), Expect = 6e-07
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 24/117 (20%)
Frame = +1
Query: 127 CGKIYSPVCGSDGKTYENPCEFDCEKDKTHSNMTIVKNTACEVGI--------------- 261
C + PVC ++G+T++N CE + +T S + + C +G+
Sbjct: 405 CEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGVCATFDSCKKPQVCVV 464
Query: 262 -----PCY---CTLEYAPVCGSNGKTYANKCSLECTQKII-PSLKMEHDGECQGAKL 405
C CT E+ VCGS+GKTY+N+C L+ + ++ ++++ C+ KL
Sbjct: 465 VDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKL 521
Score = 50.0 bits (114), Expect = 1e-06
Identities = 47/158 (29%), Positives = 62/158 (39%), Gaps = 47/158 (29%)
Frame = +1
Query: 148 VCGSDGKTYENPCEFDCEKDKTHSNMTIVKNTAC-EVGIPCY------------------ 270
VCG+DGKTY N C K ++ + K C E G PC
Sbjct: 338 VCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCVVKPDRTA 397
Query: 271 -------CTLEYAPVCGSNGKTYANKCSLE---CTQKIIPSLKMEHDGECQGAKLASLHP 420
C PVC +NG+T+ N+C ++ C K + +K++H G C A+
Sbjct: 398 ECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSM--IKVKHQGTCGIGVCATFDS 455
Query: 421 C------------------ICTREKDPVCGSDGVTYSN 480
C CT E VCGSDG TYSN
Sbjct: 456 CKKPQVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSN 493
Score = 47.6 bits (108), Expect = 6e-06
Identities = 42/127 (33%), Positives = 51/127 (40%), Gaps = 5/127 (3%)
Frame = +1
Query: 115 PLCICGKI---YSPVCGSDGKTYENPCEFDCEKDKTHSNMTIVKNTACEVG--IPCYCTL 279
P C+C + VCGSDGKTY N C N+ + N+ACE C
Sbjct: 469 PKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKEKCDF 528
Query: 280 EYAPVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKDPVCGS 459
A V G N K KC +C PS +ME E VCG+
Sbjct: 529 YSACVVGENEKAEC-KCPDDC-----PSYEMEEGKE--------------------VCGT 562
Query: 460 DGVTYSN 480
DGVTYS+
Sbjct: 563 DGVTYSS 569
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 22/88 (25%)
Frame = +1
Query: 142 SPVCGSDGKTYENPCEFDCEKDKTHSNMTI--------------VKNTACEVGI----PC 267
SPVC S G Y++ C ++ +N+T+ C++G+ C
Sbjct: 266 SPVCSSHGVDYQSSCHLRHHACESKTNITVKFFGRCDPCHGHKCPNGQTCQLGVDRRPEC 325
Query: 268 ----YCTLEYAPVCGSNGKTYANKCSLE 339
CT+ A VCG++GKTY N+C L+
Sbjct: 326 KCSEQCTMNSAHVCGTDGKTYLNECFLK 353
Score = 34.7 bits (76), Expect = 0.042
Identities = 32/120 (26%), Positives = 45/120 (37%), Gaps = 24/120 (20%)
Frame = +1
Query: 148 VCGSDGKTYENPCEFDCEKDKTHSNMTIVK----------NTACEVGIPC---YCTLEY- 285
VCG+DG TY + C +K H + ++ + C G C C Y
Sbjct: 559 VCGTDGVTYSSECHM--KKSACHQSKFVMTAFEGKCDECLHVQCRYGEECRSGVCVCSYN 616
Query: 286 --------APVCGSNGKTYANKCSLECT--QKIIPSLKMEHDGECQGAKLASLHPCICTR 435
A +CG NG Y + C L+ QK P +M C +K + C C R
Sbjct: 617 CPANPPLSARICGENGVLYPSLCHLQLASCQKGAPISEMP-PSHCHSSKTSFPDSCQCNR 675
Score = 34.3 bits (75), Expect = 0.056
Identities = 35/125 (28%), Positives = 47/125 (37%), Gaps = 24/125 (19%)
Frame = +1
Query: 178 NPCE-FDCEKDK----THSNMTIVKNTACEVGIPCYC-TLEYAPVCGSNGKTYANKCSLE 339
NPCE C + N ++ C P Y ++E +PVC S+G Y + C L
Sbjct: 224 NPCEDLRCGPGEDCVVNQINGILLAKCVCPTQCPNYGDSVESSPVCSSHGVDYQSSCHLR 283
Query: 340 ---CTQKIIPSLK-MEHDGECQGAKLASLHPC--------------ICTREKDPVCGSDG 465
C K ++K C G K + C CT VCG+DG
Sbjct: 284 HHACESKTNITVKFFGRCDPCHGHKCPNGQTCQLGVDRRPECKCSEQCTMNSAHVCGTDG 343
Query: 466 VTYSN 480
TY N
Sbjct: 344 KTYLN 348
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 148 VCGSDGKTYENPCEFDCEKDKTHSNMTIVKNTACE 252
VCGSDG TY N CE K ++ V C+
Sbjct: 819 VCGSDGTTYSNLCELKMFACKHQIDVVPVSMGICD 853
Score = 28.3 bits (60), Expect = 3.7
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 292 VCGSNGKTYANKCSLE 339
VCGS+G TY+N C L+
Sbjct: 819 VCGSDGTTYSNLCELK 834
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1
Query: 448 VCGSDGVTYSN 480
VCGSDG TYSN
Sbjct: 819 VCGSDGTTYSN 829
>U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical
protein F47E1.4 protein.
Length = 728
Score = 32.3 bits (70), Expect = 0.23
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 CICGKIYS-PVCGSDGKTYENPCEFDCEKDKTHSNMTIVKNTACE 252
C C + PVC +DG Y +PC C + + ++ +CE
Sbjct: 528 CSCENAHLYPVCSADGTAYFSPCHAGCREATQFGSDPVIGFASCE 572
>Z83120-9|CAB05589.2| 773|Caenorhabditis elegans Hypothetical
protein R06A4.7 protein.
Length = 773
Score = 31.9 bits (69), Expect = 0.30
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 193 DCEKDKTHSNMTIVKN-TACEVGIPCYCTLEYAPVCGSNGK-TYANKCSLECTQK 351
D +++ MT V TAC PC T E C NG +Y KC + C+Q+
Sbjct: 512 DSQRNSEKVRMTAVTPITACRHAGPCNATAENC-ACRENGVCSYMCKCDINCSQR 565
>Z81515-11|CAB04199.2| 773|Caenorhabditis elegans Hypothetical
protein R06A4.7 protein.
Length = 773
Score = 31.9 bits (69), Expect = 0.30
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 193 DCEKDKTHSNMTIVKN-TACEVGIPCYCTLEYAPVCGSNGK-TYANKCSLECTQK 351
D +++ MT V TAC PC T E C NG +Y KC + C+Q+
Sbjct: 512 DSQRNSEKVRMTAVTPITACRHAGPCNATAENC-ACRENGVCSYMCKCDINCSQR 565
>AF011893-1|AAC27124.1| 773|Caenorhabditis elegans maternal-effect
sterile 2 protein.
Length = 773
Score = 31.9 bits (69), Expect = 0.30
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 193 DCEKDKTHSNMTIVKN-TACEVGIPCYCTLEYAPVCGSNGK-TYANKCSLECTQK 351
D +++ MT V TAC PC T E C NG +Y KC + C+Q+
Sbjct: 512 DSQRNSEKVRMTAVTPITACRHAGPCNATAENC-ACRENGVCSYMCKCDINCSQR 565
>AL032660-2|CAA21751.1| 690|Caenorhabditis elegans Hypothetical
protein Y70G10A.3 protein.
Length = 690
Score = 31.1 bits (67), Expect = 0.52
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +1
Query: 265 CYCTLEYAPVCGSN-GKTYANKCSLECT 345
C+C +E+ PVC N G Y + C CT
Sbjct: 457 CHCKMEWNPVCDRNTGHMYYSACHAGCT 484
>U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical
protein K02G10.5 protein.
Length = 655
Score = 30.7 bits (66), Expect = 0.69
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +1
Query: 121 CICGKIYSPVCGSDGK-TYENPCEFDC 198
C C ++PVC D K T+ +PC C
Sbjct: 449 CHCDSFFNPVCSEDSKLTFLSPCHAGC 475
>AL032660-1|CAA21752.1| 711|Caenorhabditis elegans Hypothetical
protein Y70G10A.2 protein.
Length = 711
Score = 30.3 bits (65), Expect = 0.91
Identities = 20/74 (27%), Positives = 27/74 (36%), Gaps = 4/74 (5%)
Frame = +1
Query: 121 CICG--KIYSPVCGSDGKTYENPCEFDCEKDKTHSNMTIVKNTACEVGIPCY--CTLEYA 288
C+ G K ++ C G Y NP DC + + N C+ T E
Sbjct: 77 CLYGNRKTFTVTCNELGAIYPNPSNIDCGESVQERKIRDTTNEMVSSCKVCFGRGTKECQ 136
Query: 289 PVCGSNGKTYANKC 330
PV S+G KC
Sbjct: 137 PVTNSDGVVQGYKC 150
>U39993-2|AAK72059.1| 744|Caenorhabditis elegans Hypothetical
protein F47E1.2 protein.
Length = 744
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +1
Query: 121 CICGKIYSPVCGSDGKTYENPCEFDCEKDKTHSNMTIVKNTACE 252
C ++Y PVC G Y +PC C + + + ++ T+C+
Sbjct: 538 CENARLY-PVCDQTGFAYFSPCHAGCREAMQYGSDPVLDFTSCQ 580
>Z82288-1|CAB05322.2| 479|Caenorhabditis elegans Hypothetical
protein ZK896.1 protein.
Length = 479
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 293 TGAYSKVQ*QGMPTSHAVFFTIVILLCVLSF 201
TGA+ + Q TS+ + FTIV+ +C+ F
Sbjct: 448 TGAFVSFEFQKSATSNGILFTIVLTICMAIF 478
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/61 (31%), Positives = 25/61 (40%)
Frame = +1
Query: 271 CTLEYAPVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKDPV 450
CTLE P C +C+ +C Q P + + CQ +A P I T E P
Sbjct: 226 CTLECQPTCQQAVPQCQQQCAPQCQQPSAPQCQ-QCQSACQSPVVA---PQIITLEVVPQ 281
Query: 451 C 453
C
Sbjct: 282 C 282
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 28.7 bits (61), Expect = 2.8
Identities = 24/82 (29%), Positives = 30/82 (36%), Gaps = 1/82 (1%)
Frame = +1
Query: 220 NMTIVKNTACEVGIPCYCTLEYAPVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGA 399
N T+ N C G V S G+T C P ++ H G C
Sbjct: 290 NETMPYNYYCFCGRMRNPNFRVGEVPHSCGETCGGARKFGCPH---PCTELCHPGPCIEC 346
Query: 400 KLASLHPCICTREKDPV-CGSD 462
KL + C C + K V CGSD
Sbjct: 347 KLFTTKSCNCGKTKKSVRCGSD 368
>Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical
protein ZK1067.7 protein.
Length = 373
Score = 28.3 bits (60), Expect = 3.7
Identities = 26/127 (20%), Positives = 42/127 (33%), Gaps = 12/127 (9%)
Frame = +1
Query: 115 PLCICGKIYSPVCGSDGKT-------YENPCEFDCEKDKTHSNMTIVKNTACEVGIPCYC 273
P C C +P CG + +N C +C + S T + +C+ C
Sbjct: 162 PTCNCQSACAPACGGNNNNQQIIVVQQDNSCSSNCNNQCSSSCSTPICIQSCQSSCQQAC 221
Query: 274 TLEYAPVCGSNGKTYANKCSLECTQKIIPSLKMEHDGE-----CQGAKLASLHPCICTRE 438
P C CS CT P + + G+ C ++ IC ++
Sbjct: 222 QPTCQPQC-------MPSCSSSCTSNQAPIVIVAQQGDSCSNSCSNQCQSACPTPICVQQ 274
Query: 439 KDPVCGS 459
+ C S
Sbjct: 275 CNSQCQS 281
>Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical protein
T01G1.3 protein.
Length = 1083
Score = 27.9 bits (59), Expect = 4.8
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = +2
Query: 236 KTPHARWASPATVPWNMPPSVALTEKLTPTNVHWN--APKRLYRL*RWNMMANARELNWR 409
+TP P T+P NMPPS + + P WN P L N E+NW+
Sbjct: 848 QTPSWDHKPPPTMPANMPPS----KPVAPVTPGWNDPPPMALKPTTVAQPKQNVMEINWK 903
>Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical protein
T01G1.3 protein.
Length = 1083
Score = 27.9 bits (59), Expect = 4.8
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = +2
Query: 236 KTPHARWASPATVPWNMPPSVALTEKLTPTNVHWN--APKRLYRL*RWNMMANARELNWR 409
+TP P T+P NMPPS + + P WN P L N E+NW+
Sbjct: 848 QTPSWDHKPPPTMPANMPPS----KPVAPVTPGWNDPPPMALKPTTVAQPKQNVMEINWK 903
>U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical
protein C01B10.6b protein.
Length = 503
Score = 27.5 bits (58), Expect = 6.4
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 6/56 (10%)
Frame = +1
Query: 241 TACEVGIPCYCTLEYAPVCGSN-----GKTYANKCSLEC-TQKIIPSLKMEHDGEC 390
T CE +P C + CG N G Y N CS +C + P K D C
Sbjct: 345 TNCETTLPDPCQSKQKRACGQNALSPYGVCYKNICSDQCFSCACSPGAKSPPDQSC 400
>U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical
protein C01B10.6a protein.
Length = 506
Score = 27.5 bits (58), Expect = 6.4
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 6/56 (10%)
Frame = +1
Query: 241 TACEVGIPCYCTLEYAPVCGSN-----GKTYANKCSLEC-TQKIIPSLKMEHDGEC 390
T CE +P C + CG N G Y N CS +C + P K D C
Sbjct: 348 TNCETTLPDPCQSKQKRACGQNALSPYGVCYKNICSDQCFSCACSPGAKSPPDQSC 403
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 27.5 bits (58), Expect = 6.4
Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Frame = +1
Query: 268 YCTLEYAPVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCI--CTREK 441
+C LE P C +C+ +C Q P + + CQ + CI C +
Sbjct: 203 HCNLECQPTCQQAVSQCQQQCAPQCQQPSAPQCQ-QCQSSCQQTQQCQ-QQCIPLCNQPS 260
Query: 442 DPVC 453
P C
Sbjct: 261 APAC 264
>AF100670-1|AAN73858.1| 420|Caenorhabditis elegans Puf
(pumilio/fbf) domain-containingprotein 4 protein.
Length = 420
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = -2
Query: 298 HRRGHIPRYSSRGCPPRMRCFSRLSYCCVSCLFR--SQIHTG 179
H+R PRY R P M +R Y + LF +Q H+G
Sbjct: 76 HQRPDTPRYQQRASTPSMTPTARFGYHGIRPLFNGYNQKHSG 117
>AL021475-1|CAA16312.1| 758|Caenorhabditis elegans Hypothetical
protein Y32F6B.1 protein.
Length = 758
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +1
Query: 121 CICGKI-YSPVCGSDGKTYENPCEFDCEKDKTHSNMTIVKNTACEV 255
C+C + PVC G Y +PC C N +I NT V
Sbjct: 516 CMCEQTPLYPVCDVSGSAYYSPCHAGCAMG--WKNYSIFDNTKATV 559
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,086,314
Number of Sequences: 27780
Number of extensions: 304363
Number of successful extensions: 925
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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