Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_L03
(424 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory recept... 23 0.92
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 2.1
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 3.7
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 3.7
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 3.7
AF225975-1|AAF74117.1| 256|Tribolium castaneum unknown protein. 21 6.5
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 20 8.6
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 20 8.6
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 20 8.6
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 20 8.6
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 20 8.6
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 20 8.6
>AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory receptor
candidate 16 protein.
Length = 452
Score = 23.4 bits (48), Expect = 0.92
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = -3
Query: 326 VGNSYIGIIIISVFFYFGASELGFMLLINLLKS 228
VG+SYI + + F+F S++ +++++ LLK+
Sbjct: 267 VGDSYIVMYV----FFFHLSDVRYVMVVYLLKN 295
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 22.2 bits (45), Expect = 2.1
Identities = 7/22 (31%), Positives = 15/22 (68%)
Frame = -3
Query: 68 QTARNIIKCLFILKSLPTTFLM 3
+ A+N++KC++ +S P+ M
Sbjct: 372 EQAKNVLKCVWCKQSFPSLAAM 393
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.4 bits (43), Expect = 3.7
Identities = 8/38 (21%), Positives = 21/38 (55%)
Frame = -3
Query: 263 LGFMLLINLLKSSTMLLNCFLTLSGLKFSCTCFLISTN 150
L + +NL+ + ++ + L G F+C F+++++
Sbjct: 251 LSLTVFLNLVAETLPQVSDAIPLLGTYFNCIMFMVASS 288
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.4 bits (43), Expect = 3.7
Identities = 8/38 (21%), Positives = 21/38 (55%)
Frame = -3
Query: 263 LGFMLLINLLKSSTMLLNCFLTLSGLKFSCTCFLISTN 150
L + +NL+ + ++ + L G F+C F+++++
Sbjct: 251 LSLTVFLNLVAETLPQVSDAIPLLGTYFNCIMFMVASS 288
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.4 bits (43), Expect = 3.7
Identities = 8/38 (21%), Positives = 21/38 (55%)
Frame = -3
Query: 263 LGFMLLINLLKSSTMLLNCFLTLSGLKFSCTCFLISTN 150
L + +NL+ + ++ + L G F+C F+++++
Sbjct: 251 LSLTVFLNLVAETLPQVSDAIPLLGTYFNCIMFMVASS 288
>AF225975-1|AAF74117.1| 256|Tribolium castaneum unknown protein.
Length = 256
Score = 20.6 bits (41), Expect = 6.5
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = -2
Query: 93 HKSVNADKADGQEYNQMFVHFEVSSHN 13
H D DG ++++ HFE S N
Sbjct: 76 HPETEKDWGDGDKHDRHERHFESSFGN 102
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 20.2 bits (40), Expect = 8.6
Identities = 8/38 (21%), Positives = 19/38 (50%)
Frame = -3
Query: 263 LGFMLLINLLKSSTMLLNCFLTLSGLKFSCTCFLISTN 150
L + +NL+ + + L G F+C F+++++
Sbjct: 251 LSLTVFLNLVAEKIPTTSDAVPLIGTYFNCIMFMVASS 288
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 20.2 bits (40), Expect = 8.6
Identities = 8/38 (21%), Positives = 19/38 (50%)
Frame = -3
Query: 263 LGFMLLINLLKSSTMLLNCFLTLSGLKFSCTCFLISTN 150
L + +NL+ + + L G F+C F+++++
Sbjct: 251 LSLTVFLNLVAEKIPTTSDAVPLIGTYFNCIMFMVASS 288
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 20.2 bits (40), Expect = 8.6
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +1
Query: 139 IEKQFVEIKKQVQE 180
++KQ VEI KQ+Q+
Sbjct: 1379 LDKQAVEIVKQLQK 1392
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 20.2 bits (40), Expect = 8.6
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +1
Query: 139 IEKQFVEIKKQVQE 180
++KQ VEI KQ+Q+
Sbjct: 1379 LDKQAVEIVKQLQK 1392
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 20.2 bits (40), Expect = 8.6
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +1
Query: 139 IEKQFVEIKKQVQE 180
++KQ VEI KQ+Q+
Sbjct: 1379 LDKQAVEIVKQLQK 1392
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 20.2 bits (40), Expect = 8.6
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +1
Query: 139 IEKQFVEIKKQVQE 180
++KQ VEI KQ+Q+
Sbjct: 1379 LDKQAVEIVKQLQK 1392
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,902
Number of Sequences: 336
Number of extensions: 1077
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 9384961
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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