Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_L03
         (424 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09077-1|CAA70298.1| 2644|Homo sapiens atr protein.                    30   3.7  
U76308-1|AAC50929.1| 2644|Homo sapiens protein kinase ATR protein.     30   3.7  
U49844-1|AAC50405.1| 2644|Homo sapiens FRAP-related protein prot...    30   3.7  
AK125132-1|BAC86059.1|  220|Homo sapiens protein ( Homo sapiens ...    29   4.9  
AB065774-1|BAC05994.1|  310|Homo sapiens seven transmembrane hel...    29   4.9  

>Y09077-1|CAA70298.1| 2644|Homo sapiens atr protein.
          Length = 2644

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 15/63 (23%), Positives = 34/63 (53%)
 Frame = +1

Query: 91  VKRDAEAASTGNAFSEIEKQFVEIKKQVQENFKPDNVKKQFNNMVDDFNKFMSSMNPNSE 270
           ++ DAE    G  ++ ++ + +EI +++Q   + +N+    + +     +  SS+NP+  
Sbjct: 385 IEVDAEYL-LGPLYAALKMESMEIIEEIQCQTQQENLSSNSDGISPKRRRLSSSLNPSKR 443

Query: 271 APK 279
           APK
Sbjct: 444 APK 446


>U76308-1|AAC50929.1| 2644|Homo sapiens protein kinase ATR protein.
          Length = 2644

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 15/63 (23%), Positives = 34/63 (53%)
 Frame = +1

Query: 91  VKRDAEAASTGNAFSEIEKQFVEIKKQVQENFKPDNVKKQFNNMVDDFNKFMSSMNPNSE 270
           ++ DAE    G  ++ ++ + +EI +++Q   + +N+    + +     +  SS+NP+  
Sbjct: 385 IEVDAEYL-LGPLYAALKMESMEIIEEIQCQTQQENLSSNSDGISPKRRRLSSSLNPSKR 443

Query: 271 APK 279
           APK
Sbjct: 444 APK 446


>U49844-1|AAC50405.1| 2644|Homo sapiens FRAP-related protein
           protein.
          Length = 2644

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 15/63 (23%), Positives = 34/63 (53%)
 Frame = +1

Query: 91  VKRDAEAASTGNAFSEIEKQFVEIKKQVQENFKPDNVKKQFNNMVDDFNKFMSSMNPNSE 270
           ++ DAE    G  ++ ++ + +EI +++Q   + +N+    + +     +  SS+NP+  
Sbjct: 385 IEVDAEYL-LGPLYAALKMESMEIIEEIQCQTQQENLSSNSDGISPKRRRLSSSLNPSKR 443

Query: 271 APK 279
           APK
Sbjct: 444 APK 446


>AK125132-1|BAC86059.1|  220|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43142 fis, clone CTONG3007870. ).
          Length = 220

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 172 VQENFKPDNVKKQFNNMVDDFNKFMSSMNPNSEAPK 279
           +QENF PDN+ +Q N  + +  +      P    P+
Sbjct: 62  IQENFPPDNLVRQANIQIQEIQRTPQRYPPRRATPR 97


>AB065774-1|BAC05994.1|  310|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 310

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = -3

Query: 305 IIIISVFFYFGASELGFMLLINLLKSS-TMLLNCFLTLSGLKFSCTCFLIST 153
           + +I + FY G + +G ML+I  +KSS T+    +  L  L F+ +CF  ST
Sbjct: 25  VFVIFLIFYMG-TVVGNMLIIVTIKSSRTLGSPMYFFLFYLSFADSCFSTST 75


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,143,976
Number of Sequences: 237096
Number of extensions: 518195
Number of successful extensions: 3321
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3321
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3259265358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)