Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_L02
         (613 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    25   1.9  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          25   2.5  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   4.4  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   7.8  

>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 11/33 (33%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = +2

Query: 317 PNRTIRMARREKYKRRQPLQH-QTNNSSQSRRK 412
           P R   +  +++ +RRQ  QH Q +N++Q++R+
Sbjct: 82  PQRQAVVGTQQQQQRRQQQQHQQRSNATQAQRR 114


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
 Frame = -2

Query: 153 PLCTPLIGWRSTAPDTTS--AWG 91
           P+   L+GWR  +PD ++   WG
Sbjct: 7   PIVKRLLGWRKVSPDDSAEGKWG 29


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 141 PLIGWRSTAPDTTSAWGSFTTTSPT 67
           P I W +  P ++ A+ S T   PT
Sbjct: 230 PSISWSTADPSSSPAYSSITHYEPT 254


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = +3

Query: 297 PAGPGRRPTEPSEWPGGRSTRGASR 371
           PA    R T P+ WP  R T    R
Sbjct: 275 PARRRSRSTRPTSWPRSRPTSKPKR 299


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 454,749
Number of Sequences: 2352
Number of extensions: 8187
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)