Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_L02
         (613 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ224676-1|CAA12058.1|  687|Drosophila melanogaster rho type GEF...    35   0.075
AY071298-1|AAL48920.1|  687|Drosophila melanogaster RE32772p pro...    33   0.30 
AE014134-3232|AAF53887.2|  687|Drosophila melanogaster CG10043-P...    33   0.30 
AE014134-3231|AAF53886.1|  687|Drosophila melanogaster CG10043-P...    33   0.30 
AY113377-1|AAM29382.1|  431|Drosophila melanogaster RE01730p pro...    30   2.8  
AE013599-3358|AAM68213.1|  431|Drosophila melanogaster CG3074-PB...    30   2.8  
AE013599-3357|AAF46818.2|  431|Drosophila melanogaster CG3074-PA...    30   2.8  
AE014297-4066|AAF56664.3|  979|Drosophila melanogaster CG6124-PA...    29   4.9  
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros...    29   6.5  
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen...    29   6.5  
AY095181-1|AAM12274.1|  320|Drosophila melanogaster GM07634p pro...    29   6.5  
AY060922-1|AAL28470.1|  430|Drosophila melanogaster GM06507p pro...    29   6.5  
AY071128-1|AAL48750.1|  408|Drosophila melanogaster RE17417p pro...    28   8.6  
AE014296-3182|AAF49135.1|  408|Drosophila melanogaster CG9372-PA...    28   8.6  

>AJ224676-1|CAA12058.1|  687|Drosophila melanogaster rho type GEF
           protein.
          Length = 687

 Score = 35.1 bits (77), Expect = 0.075
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +3

Query: 273 PSSASTQLPAGPGRRPTEPSEWPGGRSTRGASRYNIKPTTAAKAEEKQASN 425
           P S+   LPAG GR P  PS  P G S+ G+  +   P T + +  K++ +
Sbjct: 403 PPSSHILLPAG-GRPPATPSSIPAGSSSGGSHSHQGSPATNSMSHHKRSQS 452


>AY071298-1|AAL48920.1|  687|Drosophila melanogaster RE32772p
           protein.
          Length = 687

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +3

Query: 273 PSSASTQLPAGPGRRPTEPSEWPGGRSTRGASRYNIKPTTAAKAEEKQASN 425
           P S+   LP G GR P  PS  P G S+ G+  +   P T + +  K++ +
Sbjct: 403 PPSSHILLPPG-GRPPATPSSIPAGSSSGGSHSHQGSPATNSMSHHKRSQS 452


>AE014134-3232|AAF53887.2|  687|Drosophila melanogaster CG10043-PB,
           isoform B protein.
          Length = 687

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +3

Query: 273 PSSASTQLPAGPGRRPTEPSEWPGGRSTRGASRYNIKPTTAAKAEEKQASN 425
           P S+   LP G GR P  PS  P G S+ G+  +   P T + +  K++ +
Sbjct: 403 PPSSHILLPPG-GRPPATPSSIPAGSSSGGSHSHQGSPATNSMSHHKRSQS 452


>AE014134-3231|AAF53886.1|  687|Drosophila melanogaster CG10043-PA,
           isoform A protein.
          Length = 687

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +3

Query: 273 PSSASTQLPAGPGRRPTEPSEWPGGRSTRGASRYNIKPTTAAKAEEKQASN 425
           P S+   LP G GR P  PS  P G S+ G+  +   P T + +  K++ +
Sbjct: 403 PPSSHILLPPG-GRPPATPSSIPAGSSSGGSHSHQGSPATNSMSHHKRSQS 452


>AY113377-1|AAM29382.1|  431|Drosophila melanogaster RE01730p
           protein.
          Length = 431

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 30  TPQLPSSILPTSRWGTWW*RSPTQRWCRAPW 122
           T  LPSS     +W ++    P Q WC A W
Sbjct: 184 TDGLPSSFNALDKWSSYISEVPDQGWCGASW 214


>AE013599-3358|AAM68213.1|  431|Drosophila melanogaster CG3074-PB,
           isoform B protein.
          Length = 431

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 30  TPQLPSSILPTSRWGTWW*RSPTQRWCRAPW 122
           T  LPSS     +W ++    P Q WC A W
Sbjct: 184 TDGLPSSFNALDKWSSYISEVPDQGWCGASW 214


>AE013599-3357|AAF46818.2|  431|Drosophila melanogaster CG3074-PA,
           isoform A protein.
          Length = 431

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 30  TPQLPSSILPTSRWGTWW*RSPTQRWCRAPW 122
           T  LPSS     +W ++    P Q WC A W
Sbjct: 184 TDGLPSSFNALDKWSSYISEVPDQGWCGASW 214


>AE014297-4066|AAF56664.3|  979|Drosophila melanogaster CG6124-PA
            protein.
          Length = 979

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = -2

Query: 165  LTLIPLCTP-LIGWRSTAPDTTSAWGSFTTTSPTLTWVVLTMVAAAFVSCI 16
            L  +P+C P  +      P +   W     +   L WV +T+V+ AF+  I
Sbjct: 891  LICLPICEPECLNGLCEFPGSCVCWDGHEKSERHLKWVFITIVSMAFILAI 941


>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
            Drosophila retrotransposon412 genome. ).
          Length = 1237

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 9/34 (26%), Positives = 22/34 (64%)
 Frame = +1

Query: 496  DFFVVFHFYQCRTSTSLINSYCPFQLINYKLGNV 597
            D ++ +  Y   T+ S++++YCP++L+  +  N+
Sbjct: 1089 DVWLQYFVYCFNTTQSMVHNYCPYELVFGRTSNL 1122


>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent
           DNA polymerase protein.
          Length = 1000

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 9/34 (26%), Positives = 22/34 (64%)
 Frame = +1

Query: 496 DFFVVFHFYQCRTSTSLINSYCPFQLINYKLGNV 597
           D ++ +  Y   T+ S++++YCP++L+  +  N+
Sbjct: 852 DVWLQYFVYCFNTTQSMVHNYCPYELVFGRTSNL 885


>AY095181-1|AAM12274.1|  320|Drosophila melanogaster GM07634p
           protein.
          Length = 320

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 9/34 (26%), Positives = 22/34 (64%)
 Frame = +1

Query: 496 DFFVVFHFYQCRTSTSLINSYCPFQLINYKLGNV 597
           D ++ +  Y   T+ S++++YCP++L+  +  N+
Sbjct: 240 DVWLQYFVYCFNTTQSMVHNYCPYELVFGRTSNL 273


>AY060922-1|AAL28470.1|  430|Drosophila melanogaster GM06507p
           protein.
          Length = 430

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +3

Query: 30  TPQLPSSILPTSRWGTWW*RSPTQRWCRAPW 122
           T  LP+S     +W ++    P Q WC A W
Sbjct: 184 TDGLPNSFNALDKWSSYISEVPDQGWCGASW 214


>AY071128-1|AAL48750.1|  408|Drosophila melanogaster RE17417p
           protein.
          Length = 408

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +3

Query: 285 STQLPAGPGRRPTEPSEWP 341
           S Q P   G RP EP EWP
Sbjct: 168 SRQFPRLTGGRPAEPDEWP 186


>AE014296-3182|AAF49135.1|  408|Drosophila melanogaster CG9372-PA
           protein.
          Length = 408

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +3

Query: 285 STQLPAGPGRRPTEPSEWP 341
           S Q P   G RP EP EWP
Sbjct: 168 SRQFPRLTGGRPAEPDEWP 186


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,527,322
Number of Sequences: 53049
Number of extensions: 364847
Number of successful extensions: 1710
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1710
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)