Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_L02
(613 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036693-5|AAK29787.1| 434|Caenorhabditis elegans Hypothetical ... 30 1.1
AF016418-7|AAK18898.1| 248|Caenorhabditis elegans Hypothetical ... 30 1.1
AF016418-6|AAK18899.1| 248|Caenorhabditis elegans Hypothetical ... 30 1.1
Z79600-1|CAB01873.1| 239|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF016445-11|AAC69054.1| 248|Caenorhabditis elegans Pharyngeal g... 29 2.0
Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical pr... 29 2.6
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 2.6
AJ272503-1|CAC81659.1| 1027|Caenorhabditis elegans putative TRP ... 29 2.6
AF036693-7|AAO61432.1| 343|Caenorhabditis elegans Hypothetical ... 29 2.6
AF036693-6|AAK29792.1| 428|Caenorhabditis elegans Hypothetical ... 29 2.6
AF099915-7|AAU05581.1| 468|Caenorhabditis elegans Hypothetical ... 28 4.6
AF099915-6|AAU05582.1| 471|Caenorhabditis elegans Hypothetical ... 28 4.6
AC024843-3|AAF60838.1| 110|Caenorhabditis elegans Hypothetical ... 28 6.0
AC024781-1|AAN39662.2| 367|Caenorhabditis elegans Hypothetical ... 28 6.0
AC024757-8|AAF59454.2| 215|Caenorhabditis elegans Hypothetical ... 28 6.0
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 27 8.0
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 27 8.0
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 27 8.0
>AF036693-5|AAK29787.1| 434|Caenorhabditis elegans Hypothetical
protein C49A9.5 protein.
Length = 434
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -1
Query: 529 GTDKNETLQRNQRAAVTASQPPKPGSHWLW 440
G ++T+ QRA VT+ +PG+++LW
Sbjct: 270 GFTTSQTIGEKQRAVVTSIDAKRPGTYYLW 299
>AF016418-7|AAK18898.1| 248|Caenorhabditis elegans Hypothetical
protein C49G7.3 protein.
Length = 248
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -2
Query: 159 LIPLCTPLIGWRSTAPDTTSAWGSFTTTSPTLTWVVLTMVAAAFVSCIR 13
L P P G+ + D + +TT +PT VV M +AA +C R
Sbjct: 55 LYPASDPATGYPAPGNDVERPFACYTTATPTPAPVVPDMRSAALKNCAR 103
>AF016418-6|AAK18899.1| 248|Caenorhabditis elegans Hypothetical
protein C49G7.4 protein.
Length = 248
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -2
Query: 159 LIPLCTPLIGWRSTAPDTTSAWGSFTTTSPTLTWVVLTMVAAAFVSCIR 13
L P P G+ + D + +TT +PT VV M +AA +C R
Sbjct: 55 LYPASDPATGYPAPGNDVERPFACYTTATPTPAPVVPDMRSAALKNCAR 103
>Z79600-1|CAB01873.1| 239|Caenorhabditis elegans Hypothetical
protein F59C6.2 protein.
Length = 239
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 484 LRHVDFFVVFHFYQCRTSTSLINSYCPFQLINYKLGN 594
L ++ + VVFH+Y+ RT T ++N P K N
Sbjct: 11 LIYIYYSVVFHYYKARTLTPVVNPGTPSDSFCIKCNN 47
>AF016445-11|AAC69054.1| 248|Caenorhabditis elegans Pharyngeal
gland toxin-relatedprotein 4 protein.
Length = 248
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -2
Query: 159 LIPLCTPLIGWRSTAPDTTSAWGSFTTTSPTLTWVVLTMVAAAFVSCIR 13
L P IG+ + D + +TT +PT VV M AA +C +
Sbjct: 52 LYPPADAAIGYPAAGNDAERPFACYTTATPTPAPVVADMKTAALANCAK 100
>Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical
protein ZK512.3 protein.
Length = 1418
Score = 29.1 bits (62), Expect = 2.6
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 448 WLWCQWWWLEACF 410
W+W +WW+E CF
Sbjct: 788 WVWSFFWWIENCF 800
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 270 LPSSASTQLPAGPGRRPTEPSEWPGGRSTRG 362
+ S STQ+P G T+PS G ST G
Sbjct: 1149 MTSQGSTQIPGSTGSTVTQPSTGSGSTSTSG 1179
>AJ272503-1|CAC81659.1| 1027|Caenorhabditis elegans putative TRP
homologous cationchannel protein protein.
Length = 1027
Score = 29.1 bits (62), Expect = 2.6
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 448 WLWCQWWWLEACF 410
W+W +WW+E CF
Sbjct: 397 WVWSFFWWIENCF 409
>AF036693-7|AAO61432.1| 343|Caenorhabditis elegans Hypothetical
protein C49A9.9b protein.
Length = 343
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 529 GTDKNETLQRNQRAAVTASQPPKPGSHWLW 440
G ++T + QRA VT+ +PG ++LW
Sbjct: 273 GFTTSQTKEEKQRAVVTSIDEKRPGLYYLW 302
>AF036693-6|AAK29792.1| 428|Caenorhabditis elegans Hypothetical
protein C49A9.9a protein.
Length = 428
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 529 GTDKNETLQRNQRAAVTASQPPKPGSHWLW 440
G ++T + QRA VT+ +PG ++LW
Sbjct: 273 GFTTSQTKEEKQRAVVTSIDEKRPGLYYLW 302
>AF099915-7|AAU05581.1| 468|Caenorhabditis elegans Hypothetical
protein E02H9.3a protein.
Length = 468
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 529 GTDKNETLQRNQRAAVTASQPPKPGSHWLW 440
G ++T + QRA VT +PG ++LW
Sbjct: 313 GFTTSQTKEEKQRAVVTRIDEKRPGLYYLW 342
>AF099915-6|AAU05582.1| 471|Caenorhabditis elegans Hypothetical
protein E02H9.3b protein.
Length = 471
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 529 GTDKNETLQRNQRAAVTASQPPKPGSHWLW 440
G ++T + QRA VT +PG ++LW
Sbjct: 316 GFTTSQTKEEKQRAVVTRIDEKRPGLYYLW 345
>AC024843-3|AAF60838.1| 110|Caenorhabditis elegans Hypothetical
protein Y61A9LA.7 protein.
Length = 110
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -1
Query: 547 LKKWKCGTDKNETLQRNQRAAVTASQPPKP 458
L++ K D+ E +R +RAA++AS P+P
Sbjct: 50 LQELKTAHDEFEAQRRGKRAAISASDKPEP 79
>AC024781-1|AAN39662.2| 367|Caenorhabditis elegans Hypothetical
protein Y43H11AL.1 protein.
Length = 367
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 300 AGPGRRPTEPSEWPGGRSTRGASRYNIKPTTAAKAEEKQAS 422
A R EPSE G ++T+ S+Y K + EE++ S
Sbjct: 207 ASSARSSMEPSECGGSQNTKKLSKYMKKKNEKMRKEEQKLS 247
>AC024757-8|AAF59454.2| 215|Caenorhabditis elegans Hypothetical
protein Y37E11AL.2 protein.
Length = 215
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 276 SSASTQLPAGPGRRPTEPSEWPGGRSTRGASRYNIKPTTAA 398
SS ST +PAG S +S++ S YN+ P A+
Sbjct: 2 SSTSTAIPAGEPVATAPSSAMSAAKSSKAPSVYNVVPFNAS 42
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2
Query: 123 STAPDTTSAWGSFTTTSPTLTWVVLT 46
+TAP TT+ + TTT+PT T V T
Sbjct: 193 TTAPTTTTTTPTTTTTTPTTTTTVPT 218
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -2
Query: 141 PLIGWRSTAPDTTSAWGSFTTTSPTLTWVVLTMVAAAFVSCIR 13
PL+G +P TS+W + P L ++LT++ C++
Sbjct: 3891 PLVGRLRASPYITSSWPWWWLLLPLLAALLLTLLCCCIPWCLK 3933
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -2
Query: 141 PLIGWRSTAPDTTSAWGSFTTTSPTLTWVVLTMVAAAFVSCIR 13
PL+G +P TS+W + P L ++LT++ C++
Sbjct: 3891 PLVGRLRASPYITSSWPWWWLLLPLLAALLLTLLCCCIPWCLK 3933
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,044,490
Number of Sequences: 27780
Number of extensions: 173700
Number of successful extensions: 755
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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