Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_L01
         (556 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY372174-1|AAR17083.1|   99|Homo sapiens serine protease inhibit...    31   3.6  
AY372173-1|AAR17082.1|   99|Homo sapiens serine protease inhibit...    31   3.6  
AL109656-3|CAC36025.2|   99|Homo sapiens serine peptidase inhibi...    31   3.6  
AL627443-2|CAI14269.1|  435|Homo sapiens T, brachyury homolog (m...    30   4.7  
AJ001699-1|CAA04938.1|  435|Homo sapiens Brachyury (T) protein p...    30   4.7  

>AY372174-1|AAR17083.1|   99|Homo sapiens serine protease inhibitor
           Kunitz type 3 protein.
          Length = 99

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 19/77 (24%), Positives = 33/77 (42%)
 Frame = -1

Query: 274 FALTFYVPYQFNVLVTNGSNKLKTKFQVNNE*RCNPTTTQLSQNNSIFLIIYVLVSYSCK 95
           F L F++    N L+  G NK+  K   + +  C       S     F   Y   S  C+
Sbjct: 8   FLLRFFIFCSLNTLLLGGVNKIAEKICGDLKDPCKLDMNFGSCYEVHFRYFYNRTSKRCE 67

Query: 94  SLII*NYSGNVDNIKIR 44
           + +    +GN++N K++
Sbjct: 68  TFVFSGCNGNLNNFKLK 84


>AY372173-1|AAR17082.1|   99|Homo sapiens serine protease inhibitor
           Kunitz type 3 protein.
          Length = 99

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 19/77 (24%), Positives = 33/77 (42%)
 Frame = -1

Query: 274 FALTFYVPYQFNVLVTNGSNKLKTKFQVNNE*RCNPTTTQLSQNNSIFLIIYVLVSYSCK 95
           F L F++    N L+  G NK+  K   + +  C       S     F   Y   S  C+
Sbjct: 8   FLLRFFIFCSLNTLLLGGVNKIAEKICGDLKDPCKLDMNFGSCYEVHFRYFYNRTSKRCE 67

Query: 94  SLII*NYSGNVDNIKIR 44
           + +    +GN++N K++
Sbjct: 68  TFVFSGCNGNLNNFKLK 84


>AL109656-3|CAC36025.2|   99|Homo sapiens serine peptidase
           inhibitor, Kunitz type 4 protein.
          Length = 99

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 19/77 (24%), Positives = 33/77 (42%)
 Frame = -1

Query: 274 FALTFYVPYQFNVLVTNGSNKLKTKFQVNNE*RCNPTTTQLSQNNSIFLIIYVLVSYSCK 95
           F L F++    N L+  G NK+  K   + +  C       S     F   Y   S  C+
Sbjct: 8   FLLRFFIFCSLNTLLLGGVNKIAEKICGDLKDPCKLDMNFGSCYEVHFRYFYNRTSKRCE 67

Query: 94  SLII*NYSGNVDNIKIR 44
           + +    +GN++N K++
Sbjct: 68  TFVFSGCNGNLNNFKLK 84


>AL627443-2|CAI14269.1|  435|Homo sapiens T, brachyury homolog
           (mouse) protein.
          Length = 435

 Score = 30.3 bits (65), Expect = 4.7
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -1

Query: 508 CSRQFSRMRAHRAAPSAVP*THRNSDGLFSRNLP 407
           C R +  +R+HR++P   P  HRN+   +S N P
Sbjct: 276 CDR-YPTLRSHRSSPYPSPYAHRNNSPTYSDNSP 308


>AJ001699-1|CAA04938.1|  435|Homo sapiens Brachyury (T) protein
           protein.
          Length = 435

 Score = 30.3 bits (65), Expect = 4.7
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -1

Query: 508 CSRQFSRMRAHRAAPSAVP*THRNSDGLFSRNLP 407
           C R +  +R+HR++P   P  HRN+   +S N P
Sbjct: 276 CDR-YPTLRSHRSSPYPSPYAHRNNSPTYSDNSP 308


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,918,394
Number of Sequences: 237096
Number of extensions: 1839287
Number of successful extensions: 3332
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3332
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)