Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_K24
(562 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 81 4e-16
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 81 4e-16
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 74 8e-14
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 63 2e-10
U88173-9|AAK21384.3| 320|Caenorhabditis elegans Hypothetical pr... 41 7e-04
U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical pr... 32 0.32
AL032660-1|CAA21752.1| 711|Caenorhabditis elegans Hypothetical ... 32 0.32
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 31 0.75
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 31 0.75
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 31 0.75
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 31 0.75
Z81546-1|CAB04449.2| 859|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 4.0
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 4.0
AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin recep... 28 4.0
AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal daue... 28 4.0
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 28 5.3
U50311-10|AAA92314.1| 135|Caenorhabditis elegans Inhibitor of s... 25 6.9
Z93374-8|CAB07555.1| 359|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z74039-3|CAA98502.1| 410|Caenorhabditis elegans Hypothetical pr... 27 9.2
AF098500-1|AAC67400.2| 311|Caenorhabditis elegans Hypothetical ... 27 9.2
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 81.4 bits (192), Expect = 4e-16
Identities = 59/187 (31%), Positives = 84/187 (44%), Gaps = 46/187 (24%)
Frame = +1
Query: 130 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEA-DPCV----------- 273
C N VCG+DGKTY N+C L K D+ + K G C+EA PC
Sbjct: 323 CTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCV 382
Query: 274 --------------CTFIYAPVCGTDGNTYPNKCSLECSRPLAPSL-EMKHRGEC----- 393
C + PVC T+G T+ N+C ++ S+ ++KH+G C
Sbjct: 383 VKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGVC 442
Query: 394 ---------QEVKVADIQP-CIC---TREIKQVCGSDGVTYGNPC-LLNCATQSNPSLSI 531
Q V D +P C+C T E K+VCGSDG TY N C L N A + ++ +
Sbjct: 443 ATFDSCKKPQVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFV 502
Query: 532 EHPGPCD 552
++ C+
Sbjct: 503 KYNSACE 509
Score = 48.0 bits (109), Expect = 5e-06
Identities = 42/145 (28%), Positives = 58/145 (40%), Gaps = 3/145 (2%)
Frame = +1
Query: 127 ACARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCE--EADPCVCTFIYAPVC 300
+C + VCGSDGKTY N+C L ++ + CE + C F A V
Sbjct: 467 SCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKEKCDFYSACVV 526
Query: 301 GTDGNTYPNKCSLECSRPLAPSLEMKHRGECQEVKVADIQPCICTREIKQVCGSDGVTYG 480
G + KC +C PS EM+ E K+VCG+DGVTY
Sbjct: 527 G-ENEKAECKCPDDC-----PSYEME--------------------EGKEVCGTDGVTYS 560
Query: 481 NPC-LLNCATQSNPSLSIEHPGPCD 552
+ C + A + + G CD
Sbjct: 561 SECHMKKSACHQSKFVMTAFEGKCD 585
Score = 42.7 bits (96), Expect = 2e-04
Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 46/164 (28%)
Frame = +1
Query: 145 RPVCGSDGKTYHNQCLLYCERDKTHSDLKIVK--EGTCEE-------------ADPCVCT 279
+ VCG+DG TY ++C + ++ H ++ EG C+E + CVC+
Sbjct: 549 KEVCGTDGVTYSSEC--HMKKSACHQSKFVMTAFEGKCDECLHVQCRYGEECRSGVCVCS 606
Query: 280 F-------IYAPVCGTDGNTYPNKCSLECS--RPLAPSLEMKHRGECQEVKVA--DI--- 417
+ + A +CG +G YP+ C L+ + + AP EM C K + D
Sbjct: 607 YNCPANPPLSARICGENGVLYPSLCHLQLASCQKGAPISEMP-PSHCHSSKTSFPDFKVR 665
Query: 418 QPCIC--------------TREIKQ---VCGSDGVTYGNPCLLN 498
+PC C T + +CGSDG+ Y N C LN
Sbjct: 666 RPCACYFGATCHNWACTCPTCNLSSNYPICGSDGIVYNNQCHLN 709
Score = 38.3 bits (85), Expect = 0.004
Identities = 47/184 (25%), Positives = 73/184 (39%), Gaps = 50/184 (27%)
Frame = +1
Query: 148 PVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPC------------------- 270
PVC S G Y + C L ++ +++ + G C DPC
Sbjct: 259 PVCSSHGVDYQSSCHLRHHACESKTNITVKFFGRC---DPCHGHKCPNGQTCQLGVDRRP 315
Query: 271 ------VCTFIYAPVCGTDGNTYPNKCSLE-----------------CSRPLAP--SLEM 375
CT A VCGTDG TY N+C L+ C +P +E
Sbjct: 316 ECKCSEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMEC 375
Query: 376 KHRGEC--QEVKVADIQ-PCICTREIKQVCGSDGVTYGNPCLL---NCATQSNPSLSIEH 537
G C + + A+ + P C ++ VC ++G T+ N C + +C T+S + ++H
Sbjct: 376 GFWGSCVVKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKS--MIKVKH 433
Query: 538 PGPC 549
G C
Sbjct: 434 QGTC 437
Score = 33.5 bits (73), Expect = 0.11
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Frame = +1
Query: 121 SCACARNLRPVCGSDGKTYHNQC---LLYCERDKTHSDLKIVKE--GTCEEADPCVCTFI 285
+C + N P+CGSDG Y+NQC + C + L ++ G D C C +
Sbjct: 685 TCNLSSNY-PICGSDGIVYNNQCHLNTISCRDQREIHVLPLISHWIGESRVLDSCQCNRV 743
Query: 286 YAPVCGTDGNTYPNKCSLECSRPLAPSLEMKH 381
G+ G+T +C RP ++ H
Sbjct: 744 -----GSFGHTCDETGQCKC-RPGVAGIKCDH 769
Score = 32.3 bits (70), Expect(2) = 9e-05
Identities = 29/107 (27%), Positives = 41/107 (38%), Gaps = 19/107 (17%)
Frame = +1
Query: 289 APVCGTDGNTYPNKCSLE---CSRPLAPSLEMKHRGE-CQEVKVADIQPC---------- 426
+PVC + G Y + C L C +++ R + C K + Q C
Sbjct: 258 SPVCSSHGVDYQSSCHLRHHACESKTNITVKFFGRCDPCHGHKCPNGQTCQLGVDRRPEC 317
Query: 427 ----ICTREIKQVCGSDGVTYGNPCLLN-CATQSNPSLSIEHPGPCD 552
CT VCG+DG TY N C L A + + + G CD
Sbjct: 318 KCSEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCD 364
Score = 30.7 bits (66), Expect(2) = 9e-05
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +1
Query: 151 VCGSDGKTYHNQCLLY---CERDKTHSDLKIVKEGTCEEADPC 270
VCGSD +Y + C L C K L++ +G C++ +PC
Sbjct: 176 VCGSDHVSYSSFCHLSVRSCVLAKNGVRLRVATKGPCKKRNPC 218
Score = 28.7 bits (61), Expect = 3.0
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 295 VCGTDGNTYPNKCSLE 342
VCG+DG TY N C L+
Sbjct: 880 VCGSDGTTYSNLCELK 895
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 451 VCGSDGVTYGNPCLL 495
VCGSDG TY N C L
Sbjct: 880 VCGSDGTTYSNLCEL 894
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +1
Query: 451 VCGSDGVTYGNPCLL---NCATQSN-PSLSIEHPGPCDNR 558
VCGSD V+Y + C L +C N L + GPC R
Sbjct: 176 VCGSDHVSYSSFCHLSVRSCVLAKNGVRLRVATKGPCKKR 215
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 151 VCGSDGKTYHNQCLL 195
VCGSDG TY N C L
Sbjct: 880 VCGSDGTTYSNLCEL 894
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 81.4 bits (192), Expect = 4e-16
Identities = 59/187 (31%), Positives = 84/187 (44%), Gaps = 46/187 (24%)
Frame = +1
Query: 130 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEA-DPCV----------- 273
C N VCG+DGKTY N+C L K D+ + K G C+EA PC
Sbjct: 331 CTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCV 390
Query: 274 --------------CTFIYAPVCGTDGNTYPNKCSLECSRPLAPSL-EMKHRGEC----- 393
C + PVC T+G T+ N+C ++ S+ ++KH+G C
Sbjct: 391 VKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGVC 450
Query: 394 ---------QEVKVADIQP-CIC---TREIKQVCGSDGVTYGNPC-LLNCATQSNPSLSI 531
Q V D +P C+C T E K+VCGSDG TY N C L N A + ++ +
Sbjct: 451 ATFDSCKKPQVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFV 510
Query: 532 EHPGPCD 552
++ C+
Sbjct: 511 KYNSACE 517
Score = 48.0 bits (109), Expect = 5e-06
Identities = 42/145 (28%), Positives = 58/145 (40%), Gaps = 3/145 (2%)
Frame = +1
Query: 127 ACARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCE--EADPCVCTFIYAPVC 300
+C + VCGSDGKTY N+C L ++ + CE + C F A V
Sbjct: 475 SCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKEKCDFYSACVV 534
Query: 301 GTDGNTYPNKCSLECSRPLAPSLEMKHRGECQEVKVADIQPCICTREIKQVCGSDGVTYG 480
G + KC +C PS EM+ E K+VCG+DGVTY
Sbjct: 535 G-ENEKAECKCPDDC-----PSYEME--------------------EGKEVCGTDGVTYS 568
Query: 481 NPC-LLNCATQSNPSLSIEHPGPCD 552
+ C + A + + G CD
Sbjct: 569 SECHMKKSACHQSKFVMTAFEGKCD 593
Score = 39.9 bits (89), Expect = 0.001
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 24/122 (19%)
Frame = +1
Query: 145 RPVCGSDGKTYHNQCLLYCERDKTHSDLKIVK--EGTCEE-------------ADPCVCT 279
+ VCG+DG TY ++C + ++ H ++ EG C+E + CVC+
Sbjct: 557 KEVCGTDGVTYSSEC--HMKKSACHQSKFVMTAFEGKCDECLHVQCRYGEECRSGVCVCS 614
Query: 280 F-------IYAPVCGTDGNTYPNKCSLECS--RPLAPSLEMKHRGECQEVKVADIQPCIC 432
+ + A +CG +G YP+ C L+ + + AP EM C K + C C
Sbjct: 615 YNCPANPPLSARICGENGVLYPSLCHLQLASCQKGAPISEMP-PSHCHSSKTSFPDSCQC 673
Query: 433 TR 438
R
Sbjct: 674 NR 675
Score = 38.3 bits (85), Expect = 0.004
Identities = 47/184 (25%), Positives = 73/184 (39%), Gaps = 50/184 (27%)
Frame = +1
Query: 148 PVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPC------------------- 270
PVC S G Y + C L ++ +++ + G C DPC
Sbjct: 267 PVCSSHGVDYQSSCHLRHHACESKTNITVKFFGRC---DPCHGHKCPNGQTCQLGVDRRP 323
Query: 271 ------VCTFIYAPVCGTDGNTYPNKCSLE-----------------CSRPLAP--SLEM 375
CT A VCGTDG TY N+C L+ C +P +E
Sbjct: 324 ECKCSEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMEC 383
Query: 376 KHRGEC--QEVKVADIQ-PCICTREIKQVCGSDGVTYGNPCLL---NCATQSNPSLSIEH 537
G C + + A+ + P C ++ VC ++G T+ N C + +C T+S + ++H
Sbjct: 384 GFWGSCVVKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKS--MIKVKH 441
Query: 538 PGPC 549
G C
Sbjct: 442 QGTC 445
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 151 VCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEE 258
VCGSDG TY N C L K D+ V G C++
Sbjct: 819 VCGSDGTTYSNLCELKMFACKHQIDVVPVSMGICDD 854
Score = 32.3 bits (70), Expect(2) = 9e-05
Identities = 29/107 (27%), Positives = 41/107 (38%), Gaps = 19/107 (17%)
Frame = +1
Query: 289 APVCGTDGNTYPNKCSLE---CSRPLAPSLEMKHRGE-CQEVKVADIQPC---------- 426
+PVC + G Y + C L C +++ R + C K + Q C
Sbjct: 266 SPVCSSHGVDYQSSCHLRHHACESKTNITVKFFGRCDPCHGHKCPNGQTCQLGVDRRPEC 325
Query: 427 ----ICTREIKQVCGSDGVTYGNPCLLN-CATQSNPSLSIEHPGPCD 552
CT VCG+DG TY N C L A + + + G CD
Sbjct: 326 KCSEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCD 372
Score = 30.7 bits (66), Expect(2) = 9e-05
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +1
Query: 151 VCGSDGKTYHNQCLLY---CERDKTHSDLKIVKEGTCEEADPC 270
VCGSD +Y + C L C K L++ +G C++ +PC
Sbjct: 184 VCGSDHVSYSSFCHLSVRSCVLAKNGVRLRVATKGPCKKRNPC 226
Score = 28.7 bits (61), Expect = 3.0
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 295 VCGTDGNTYPNKCSLE 342
VCG+DG TY N C L+
Sbjct: 819 VCGSDGTTYSNLCELK 834
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 451 VCGSDGVTYGNPCLL 495
VCGSDG TY N C L
Sbjct: 819 VCGSDGTTYSNLCEL 833
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +1
Query: 451 VCGSDGVTYGNPCLL---NCATQSN-PSLSIEHPGPCDNR 558
VCGSD V+Y + C L +C N L + GPC R
Sbjct: 184 VCGSDHVSYSSFCHLSVRSCVLAKNGVRLRVATKGPCKKR 223
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 73.7 bits (173), Expect = 8e-14
Identities = 43/131 (32%), Positives = 58/131 (44%), Gaps = 5/131 (3%)
Frame = +1
Query: 115 PSSCACARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAP 294
P C C +RPVCG+D TY+N C L C + +T+ DL GTC D C + P
Sbjct: 16 PPDCDCPSVIRPVCGTDNVTYNNLCFLRCVQ-RTNEDLLFFYNGTC--CDKKECEKVGTP 72
Query: 295 VCGTDGNTYPNKC---SLEC--SRPLAPSLEMKHRGECQEVKVADIQPCICTREIKQVCG 459
+C G T+ N C +C + + SL H G C D E VC
Sbjct: 73 ICDNFGETHINDCHFAQFQCIMKKSMGLSLTKLHMGRCSS---KDCNHNCTNTEFDPVCD 129
Query: 460 SDGVTYGNPCL 492
++G Y N C+
Sbjct: 130 TNGSVYRNLCV 140
Score = 57.6 bits (133), Expect = 6e-09
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 9/141 (6%)
Frame = +1
Query: 121 SCACARNLRPVCGSDGKTYHNQCLLYCE-RDKTHSDLKIVKEGTCEEADPCVCTFIYAPV 297
S C + P+CG++G T+ N C L E + +S +++ G C + + C ++PV
Sbjct: 769 SMECDNSYDPLCGTNGVTFTNACSLQKEICESANSTIEVAYTGMCCDTN---CPSDFSPV 825
Query: 298 CGTDGNTYPNKCSLECSRPLAPS-----LEMKHRGECQEVKVADIQPCICTREIKQVCGS 462
C + G+T+ N C R +A L + C EVK + C +E VC S
Sbjct: 826 CDSKGSTHQNICHFGVKRCIAERTFGDVLTIDKFEVCNEVKECN---NACPKEYSPVCAS 882
Query: 463 DGVTYGNPCLLN---CATQSN 516
+G N C L+ C ++N
Sbjct: 883 NGQNIVNECELDKIRCLVENN 903
Score = 55.2 bits (127), Expect = 3e-08
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 17/158 (10%)
Frame = +1
Query: 127 ACARNLRPVCGSDGKTYHNQCLL-----YCERDKTHSDLKIVKE--GTCEEADPCVCTFI 285
AC + PVC S+G+ N+C L E + T D K+VK+ G C + C + +
Sbjct: 871 ACPKEYSPVCASNGQNIVNECELDKIRCLVENNVTTGD-KLVKDYDGECCRIENCDIS-V 928
Query: 286 YAPVCGTDGNTYPNKCSLE---C--SRPLAPSLEMKHRGECQEVKVADIQPCICTREIKQ 450
++PVC T+G T+ N C ++ C + ++++ ++G+C QP C +
Sbjct: 929 FSPVCDTEGVTHANMCLMDQNACIQMKKNKKTIQVSYQGQCCN------QP--CDEDKTP 980
Query: 451 VCGSDG-VTYGNPC---LLNC-ATQSNPSLSIEHPGPC 549
VC DG +T+ N C + C A + N +LSI + G C
Sbjct: 981 VC--DGTITHPNICRFRIAQCEAERVNKTLSIAYSGEC 1016
Score = 48.8 bits (111), Expect = 3e-06
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Frame = +1
Query: 130 CARNLRPVCGSDGKTYHNQCLLYCER----DKTHSDLKIVKEGTCEEADPCV--CTFIYA 291
C + +PVC S G + N C R K H + I E C + C CT
Sbjct: 537 CPTDGQPVCDSAGNLHGNLCEFTYSRCIAASKGHQ-IHIATEENCISKEACQMPCTDDKH 595
Query: 292 PVCGTDGNTYPNKCSLECSRPLAPSLEMKHRGECQE 399
P+C +D +TY N C + L LE+ +G+C E
Sbjct: 596 PICASDFSTYENLCQFRKQKCLDSELEVLFKGKCSE 631
Score = 45.2 bits (102), Expect = 3e-05
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 424 CICTREIKQVCGSDGVTYGNPCLLNCATQSNPSLSIEHPGPC 549
C C I+ VCG+D VTY N C L C ++N L + G C
Sbjct: 19 CDCPSVIRPVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTC 60
Score = 44.8 bits (101), Expect = 4e-05
Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Frame = +1
Query: 130 CARNLRPVCGSDGKTYH-NQC---LLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAPV 297
C + PVC DG H N C + CE ++ + L I G C C A V
Sbjct: 974 CDEDKTPVC--DGTITHPNICRFRIAQCEAERVNKTLSIAYSGECCLLPKGECESSGA-V 1030
Query: 298 CGTDGNTYPNKCSLECSRPLAPSLEMK-----HRGECQEVKVADIQPCICTREIKQVCGS 462
C ++G T+ N C + R +A ++ K H GEC + C + + VC S
Sbjct: 1031 CDSEGQTHMNHCVYQQRRCMAQTISQKTLNIVHTGECCAL-------ASCPKTGQPVCDS 1083
Query: 463 DGVT-------YGNPCLLNCATQSNPSLSIEHPGPC 549
G T + + C+ + N +L++++ G C
Sbjct: 1084 RGRTHDSLCHFHNSKCIFDKIHTQNTTLTLDYQGKC 1119
Score = 42.7 bits (96), Expect = 2e-04
Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 4/120 (3%)
Frame = +1
Query: 151 VCGSDGKTYHNQCLLYCERDKTHS----DLKIVKEGTCEEADPCVCTFIYAPVCGTDGNT 318
VC S+G+T+ N C+ R + L IV G C C T PVC + G T
Sbjct: 1030 VCDSEGQTHMNHCVYQQRRCMAQTISQKTLNIVHTGECCALASCPKTG--QPVCDSRGRT 1087
Query: 319 YPNKCSLECSRPLAPSLEMKHRGECQEVKVADIQPCICTREIKQVCGSDGVTYGNPCLLN 498
+ + C S+ + + ++ + + P CT E+ +C Y N C N
Sbjct: 1088 HDSLCHFHNSKCIFDKIHTQNTTLTLDYQ-GKCCPAGCTDELSVICDQHENIYRNSCYFN 1146
Score = 37.1 bits (82), Expect = 0.009
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = +1
Query: 127 ACARNLRPVCGSDGKTYHNQCLLY---CERDKTHSD---LKIVKEGTCEEADPCVCTFIY 288
+C + +PVC S G+T+ + C + C DK H+ L + +G C P CT
Sbjct: 1072 SCPKTGQPVCDSRGRTHDSLCHFHNSKCIFDKIHTQNTTLTLDYQGKC---CPAGCTDEL 1128
Query: 289 APVCGTDGNTYPNKC 333
+ +C N Y N C
Sbjct: 1129 SVICDQHENIYRNSC 1143
Score = 36.7 bits (81), Expect = 0.011
Identities = 34/138 (24%), Positives = 53/138 (38%), Gaps = 18/138 (13%)
Frame = +1
Query: 130 CARNLRPVCGSDGKTYHNQC---LLYCERDKTH-SDLKIVKEGTCE-EADPCV-CTFIYA 291
C ++ PVC + +T+ N C C+ +K S + I G C C+ C
Sbjct: 257 CDKSWDPVCDTRNRTHKNVCQFKFFACKINKIDGSVIDIAHSGACRARKSTCITCPKDEK 316
Query: 292 --PVCGTDGNTYPNKCSL----------ECSRPLAPSLEMKHRGECQEVKVADIQPCICT 435
P+C T+P CS E + ++ H Q +I P C+
Sbjct: 317 KIPICDNRNMTHPTLCSFIQYNCEARNNEDEERVLVHIKSCHERSPQFTLKDEICPRTCS 376
Query: 436 REIKQVCGSDGVTYGNPC 489
R++K VC T+ N C
Sbjct: 377 RDVKPVCDEANNTHQNLC 394
Score = 35.9 bits (79), Expect = 0.020
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = +1
Query: 292 PVCGTDGNTYPNKCSLECSRPLAPSLEMKHRGECQEVKVADIQPCI--CTREIKQVCGSD 465
PVC + GN + N C SR +A S + +E ++ + C CT + +C SD
Sbjct: 543 PVCDSAGNLHGNLCEFTYSRCIAASKGHQIHIATEENCISK-EACQMPCTDDKHPICASD 601
Query: 466 GVTYGNPCLLNCATQSNPSLSIEHPGPC 549
TY N C + L + G C
Sbjct: 602 FSTYENLCQFRKQKCLDSELEVLFKGKC 629
Score = 34.3 bits (75), Expect = 0.061
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Frame = +1
Query: 130 CARNLRPVCGSDGKTYHNQC---LLYCERDKTHS-DLKIVKEGTCEEADPCV--CTFI-Y 288
C + P+C + G+T+ N C C K+ L + G C D C CT +
Sbjct: 66 CEKVGTPICDNFGETHINDCHFAQFQCIMKKSMGLSLTKLHMGRCSSKD-CNHNCTNTEF 124
Query: 289 APVCGTDGNTYPNKCSLECSR 351
PVC T+G+ Y N C + R
Sbjct: 125 DPVCDTNGSVYRNLCVFQMRR 145
Score = 30.3 bits (65), Expect = 0.99
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +1
Query: 430 CTREIKQVCGSDGVTYGNPCLL--NCATQSNPSLSIEHPGPC 549
C +CG++GVT+ N C L +N ++ + + G C
Sbjct: 772 CDNSYDPLCGTNGVTFTNACSLQKEICESANSTIEVAYTGMC 813
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 62.9 bits (146), Expect = 2e-10
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 9/153 (5%)
Frame = +1
Query: 118 SSCACARNLRPVCGSDGK---TYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIY 288
S+C+C + PVC +G TY N+C+ C ++ DL ++ EG+C A C
Sbjct: 23 STCSCKPEIDPVCVREGPYQYTYSNKCVFQCAQE-NKKDLVLLYEGSCCSAR--YCNMFE 79
Query: 289 APVCGTDGNTYPNKCSLECSRPLAPSLEMKHRG-ECQEVKVADIQPCICTREIKQVCGSD 465
PVC ++G Y C E + + L H + + K + P C E VC
Sbjct: 80 QPVC-SEGQMYQTVCEFEERQCIEFKLFKNHISMDSSQEKCSCTAP--CPTEWNPVCDKK 136
Query: 466 GVTYGNPC-LLN--C--ATQSNPSLSIEHPGPC 549
G T+ N C LN C Q N SL +++ G C
Sbjct: 137 GQTHANFCTFLNSKCYHKNQLNESLEVDYSGVC 169
Score = 41.1 bits (92), Expect = 5e-04
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Frame = +1
Query: 130 CARNLRPVCGSDGKTYHNQCLLY---C-ERDKTHSDLKIVKEGTCEEADPCVCTFIYAPV 297
C PVC G+T+ N C C +++ + L++ G C E D C V
Sbjct: 125 CPTEWNPVCDKKGQTHANFCTFLNSKCYHKNQLNESLEVDYSGVCCE-DMCSAGQTSLTV 183
Query: 298 CGTDGNTYPNKCSLECSRPLAPSLEMKHRGECQEVKVADIQPC 426
C ++GNT+ + CS +A +M+ + +++A + PC
Sbjct: 184 CDSEGNTHTDICSFY----IAKCRQMRRGIGKKRLQIAGVGPC 222
Score = 31.9 bits (69), Expect = 0.32
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +1
Query: 253 EEADPCVCTFIYAPVCGTDGN---TYPNKCSLECSRPLAPSLEMKHRGECQEVKVADI-- 417
E C C PVC +G TY NKC +C++ L + + G C + ++
Sbjct: 20 EPNSTCSCKPEIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSCCSARYCNMFE 79
Query: 418 QPCICT 435
QP +C+
Sbjct: 80 QP-VCS 84
>U88173-9|AAK21384.3| 320|Caenorhabditis elegans Hypothetical
protein F46F11.7 protein.
Length = 320
Score = 40.7 bits (91), Expect = 7e-04
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +1
Query: 133 ARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAPVCGTDG 312
AR++ CG GK + QC+L + + + + ++G CE+ C I CG +
Sbjct: 89 ARSIVSDCGKHGKCVNGQCILNRCQGVSCDEGSMCRDGKCEKVLETFC--IGHADCGPNM 146
Query: 313 NTYPNKCSLECSRPL--APSLEMKHRGEC 393
NKC L+ PL E+ H G+C
Sbjct: 147 LCQQNKCQLKPQEPLCNCQPHEICHHGQC 175
>U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical
protein F47E1.4 protein.
Length = 728
Score = 31.9 bits (69), Expect = 0.32
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +1
Query: 118 SSCACAR-NLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCE 255
S C+C +L PVC +DG Y + C C ++ +CE
Sbjct: 526 SQCSCENAHLYPVCSADGTAYFSPCHAGCREATQFGSDPVIGFASCE 572
>AL032660-1|CAA21752.1| 711|Caenorhabditis elegans Hypothetical
protein Y70G10A.2 protein.
Length = 711
Score = 31.9 bits (69), Expect = 0.32
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 286 YAPVCGTDGNTYPNKCSLECSRPLAPSLEMKHRGECQEVKVADIQPCIC--TREIKQVCG 459
+ C G YPN +++C + E K R E+ V+ + C T+E + V
Sbjct: 85 FTVTCNELGAIYPNPSNIDCGESVQ---ERKIRDTTNEM-VSSCKVCFGRGTKECQPVTN 140
Query: 460 SDGVTYGNPCL 492
SDGV G C+
Sbjct: 141 SDGVVQGYKCV 151
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 30.7 bits (66), Expect = 0.75
Identities = 24/88 (27%), Positives = 35/88 (39%)
Frame = +1
Query: 130 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAPVCGTD 309
C+ N R C +DG + +CL ER + + G+C DP C C
Sbjct: 948 CSENER--CTNDGSDWFCECLPGFERIRNG---QCAYPGSCNPNDPMSCDVRKRQQCLPR 1002
Query: 310 GNTYPNKCSLECSRPLAPSLEMKHRGEC 393
GN Y +C R P ++ + EC
Sbjct: 1003 GNIYTCQCGRNEKR--HPITDICLKNEC 1028
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 30.7 bits (66), Expect = 0.75
Identities = 24/88 (27%), Positives = 35/88 (39%)
Frame = +1
Query: 130 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAPVCGTD 309
C+ N R C +DG + +CL ER + + G+C DP C C
Sbjct: 1532 CSENER--CTNDGSDWFCECLPGFERIRNG---QCAYPGSCNPNDPMSCDVRKRQQCLPR 1586
Query: 310 GNTYPNKCSLECSRPLAPSLEMKHRGEC 393
GN Y +C R P ++ + EC
Sbjct: 1587 GNIYTCQCGRNEKR--HPITDICLKNEC 1612
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 30.7 bits (66), Expect = 0.75
Identities = 24/88 (27%), Positives = 35/88 (39%)
Frame = +1
Query: 130 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAPVCGTD 309
C+ N R C +DG + +CL ER + + G+C DP C C
Sbjct: 948 CSENER--CTNDGSDWFCECLPGFERIRNG---QCAYPGSCNPNDPMSCDVRKRQQCLPR 1002
Query: 310 GNTYPNKCSLECSRPLAPSLEMKHRGEC 393
GN Y +C R P ++ + EC
Sbjct: 1003 GNIYTCQCGRNEKR--HPITDICLKNEC 1028
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 30.7 bits (66), Expect = 0.75
Identities = 24/88 (27%), Positives = 35/88 (39%)
Frame = +1
Query: 130 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAPVCGTD 309
C+ N R C +DG + +CL ER + + G+C DP C C
Sbjct: 1532 CSENER--CTNDGSDWFCECLPGFERIRNG---QCAYPGSCNPNDPMSCDVRKRQQCLPR 1586
Query: 310 GNTYPNKCSLECSRPLAPSLEMKHRGEC 393
GN Y +C R P ++ + EC
Sbjct: 1587 GNIYTCQCGRNEKR--HPITDICLKNEC 1612
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 30.7 bits (66), Expect = 0.75
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 361 PSLEMKHRGECQEVKVADIQPCICTREIKQV-CGSD 465
P E+ H G C E K+ + C C + K V CGSD
Sbjct: 333 PCTELCHPGPCIECKLFTTKSCNCGKTKKSVRCGSD 368
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 30.7 bits (66), Expect = 0.75
Identities = 24/88 (27%), Positives = 35/88 (39%)
Frame = +1
Query: 130 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAPVCGTD 309
C+ N R C +DG + +CL ER + + G+C DP C C
Sbjct: 1532 CSENER--CTNDGSDWFCECLPGFERIRNG---QCAYPGSCNPNDPMSCDVRKRQQCLPR 1586
Query: 310 GNTYPNKCSLECSRPLAPSLEMKHRGEC 393
GN Y +C R P ++ + EC
Sbjct: 1587 GNIYTCQCGRNEKR--HPITDICLKNEC 1612
>Z81546-1|CAB04449.2| 859|Caenorhabditis elegans Hypothetical
protein F53A2.1 protein.
Length = 859
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 181 NQCLLYCERDKTHSDLKIVKEGTCEEADPCVCT 279
N +LY R K HS++ I G C++ PC+CT
Sbjct: 450 NLAVLYKIR-KEHSEIIIHNLGHCDKHLPCICT 481
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 29.1 bits (62), Expect = 2.3
Identities = 26/124 (20%), Positives = 45/124 (36%), Gaps = 3/124 (2%)
Frame = +1
Query: 121 SCACARNLRPVCGSDGK--TYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAP 294
SC+C + C S + +QC+ C++ + C+ C
Sbjct: 48 SCSCQPSTPCSCASSQQYQLQTSQCMPACQQSCSQQ---------CQSNTNTQCQPTCQQ 98
Query: 295 VCGTDGNTYPNKCSLECSRPLAPSLEMKHRGECQEVKVADIQPCICTREIKQVCGSDG-V 471
C T + S+ P E + +C + + A IC ++ +Q CGS G +
Sbjct: 99 SCQTSSCNPMTSTPIPASQSCLPECENRCMQQCTQQQTAQQCQPICQQQCQQECGSTGNM 158
Query: 472 TYGN 483
Y N
Sbjct: 159 MYNN 162
Score = 28.7 bits (61), Expect = 3.0
Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 2/93 (2%)
Frame = +1
Query: 268 CVCTFIYAPVCGTDGNTYPNKCSLECSRPLAPSLEMKHRGECQEVKVADIQPCICTREIK 447
C C P C + CS + S P + + ++ +++ + P C +
Sbjct: 28 CGCAQSVQPTCSCQQASQQYSCSCQPSTPCSCASSQQY-----QLQTSQCMPA-CQQSCS 81
Query: 448 QVCGSDGVTYGNP-CLLNCATQS-NPSLSIEHP 540
Q C S+ T P C +C T S NP S P
Sbjct: 82 QQCQSNTNTQCQPTCQQSCQTSSCNPMTSTPIP 114
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.3 bits (60), Expect = 4.0
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +3
Query: 93 NIRRNSAAVVMRVRKKLKTGLRIRRQDLPQPVPLVLREGQDAQRFE-NRERGYV*GSRSL 269
++R +S+ +++RV+ K+ +RRQ PQP P + Q Q++E E YV SR+L
Sbjct: 566 SMRGSSSPILVRVQLSSKSPDSVRRQVQPQPQP----QPQQQQQYEAYGEADYV--SRNL 619
Query: 270 RL 275
L
Sbjct: 620 PL 621
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.3 bits (60), Expect = 4.0
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +3
Query: 93 NIRRNSAAVVMRVRKKLKTGLRIRRQDLPQPVPLVLREGQDAQRFE-NRERGYV*GSRSL 269
++R +S+ +++RV+ K+ +RRQ PQP P + Q Q++E E YV SR+L
Sbjct: 788 SMRGSSSPILVRVQLSSKSPDSVRRQVQPQPQP----QPQQQQQYEAYGEADYV--SRNL 841
Query: 270 RL 275
L
Sbjct: 842 PL 843
>AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin receptor
homolog protein.
Length = 1846
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 136 RNLRPVCGSDGKTYHNQCLLYCER--DKT--HSDLKIVKEGTCEE 258
+ + P C ++G H+QC+ CER D T H+ + +G C E
Sbjct: 380 KEIGPGCDANGDRCHDQCVGGCERVNDATACHACKNVYHKGKCIE 424
>AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal dauer
formation protein 2 protein.
Length = 1843
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 136 RNLRPVCGSDGKTYHNQCLLYCER--DKT--HSDLKIVKEGTCEE 258
+ + P C ++G H+QC+ CER D T H+ + +G C E
Sbjct: 377 KEIGPGCDANGDRCHDQCVGGCERVNDATACHACKNVYHKGKCIE 421
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +1
Query: 274 CTFIYAPVCGTDGNTYPNKCSLECSRPLAPSLEMKHRGECQEVKVADIQPCICTREIKQV 453
CT P C +C+ +C +P AP + + + CQ VA P I T E+
Sbjct: 226 CTLECQPTCQQAVPQCQQQCAPQCQQPSAPQCQ-QCQSACQSPVVA---PQIITLEVVPQ 281
Query: 454 C 456
C
Sbjct: 282 C 282
>U50311-10|AAA92314.1| 135|Caenorhabditis elegans Inhibitor of
serine protease likeprotein protein 2, isoform a
protein.
Length = 135
Score = 25.4 bits (53), Expect(2) = 6.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 199 CERDKTHSDLKIVKEGTCEEADPCVCT 279
C ++T E TCE+ +P VCT
Sbjct: 80 CPENETFFGCGTACEATCEKPNPTVCT 106
Score = 20.6 bits (41), Expect(2) = 6.9
Identities = 7/23 (30%), Positives = 10/23 (43%)
Frame = +1
Query: 127 ACARNLRPVCGSDGKTYHNQCLL 195
+C P CG K QC++
Sbjct: 28 SCHNTCEPQCGYTPKACTEQCIM 50
>Z93374-8|CAB07555.1| 359|Caenorhabditis elegans Hypothetical
protein C06C6.5a protein.
Length = 359
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 467 PSLPQTCLISRVQIHGCISATLTSWHSPRC 378
PSLP + L SR+ C S TLT+++ +C
Sbjct: 99 PSLPISQLPSRIIPRDCSSITLTAFNWQKC 128
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical
protein W05B2.2 protein.
Length = 1278
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = -1
Query: 292 GHI*RYRRKDRLPHTYPLSR--FSNRCASCPSR 200
G I R D P T+ +R +SNR + CPSR
Sbjct: 578 GRIIACERNDDCPSTHTCTRQLYSNRTSCCPSR 610
>Z74039-3|CAA98502.1| 410|Caenorhabditis elegans Hypothetical
protein K03B8.3 protein.
Length = 410
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 295 VCGTDGNTYPNKCSLECSRPL 357
+CG G T P+KCS EC PL
Sbjct: 268 LCGNGGYTNPSKCS-ECICPL 287
>AF098500-1|AAC67400.2| 311|Caenorhabditis elegans Hypothetical
protein F43B10.1 protein.
Length = 311
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 346 SRPLAPSLEMKHRGECQEVKVADIQPCICT 435
+RP L++ H G ++ +D+QP I T
Sbjct: 152 TRPFMEKLDLSHLGPSDPLRDSDLQPAITT 181
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,252,353
Number of Sequences: 27780
Number of extensions: 295445
Number of successful extensions: 1049
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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