Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_K23
         (575 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   4.3  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   7.5  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   7.5  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    21   7.5  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   9.9  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   9.9  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   9.9  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   9.9  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   9.9  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   9.9  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   9.9  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    21   9.9  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   9.9  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   9.9  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   9.9  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   9.9  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -1

Query: 146 HSCMQTLFPIGYTTCSPSGCT 84
           H  + +L+ I +  CS +GC+
Sbjct: 336 HVKLGSLYHISFMACSSAGCS 356


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +1

Query: 319 HKVRVEALTFSSDERY 366
           H++ V ++T + DER+
Sbjct: 251 HEIAVHSITHNDDERF 266


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 213 RRQCDGGHAVCMTTEKI 163
           RR+ +  HA+C+T  +I
Sbjct: 251 RRRIEMAHALCLTERQI 267


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 213 RRQCDGGHAVCMTTEKI 163
           RR+ +  HA+C+T  +I
Sbjct: 33  RRRIEMAHALCLTERQI 49


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 213 RRQCDGGHAVCMTTEKI 163
           RR+ +  HA+C+T  +I
Sbjct: 34  RRRIEIAHALCLTERQI 50


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 213 RRQCDGGHAVCMTTEKI 163
           RR+ +  HA+C+T  +I
Sbjct: 248 RRRIEIAHALCLTERQI 264


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 213 RRQCDGGHAVCMTTEKI 163
           RR+ +  HA+C+T  +I
Sbjct: 248 RRRIEIAHALCLTERQI 264


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 213 RRQCDGGHAVCMTTEKI 163
           RR+ +  HA+C+T  +I
Sbjct: 270 RRRIEIAHALCLTERQI 286


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 213 RRQCDGGHAVCMTTEKI 163
           RR+ +  HA+C+T  +I
Sbjct: 248 RRRIEIAHALCLTERQI 264


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 213 RRQCDGGHAVCMTTEKI 163
           RR+ +  HA+C+T  +I
Sbjct: 204 RRRIEIAHALCLTERQI 220


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 213 RRQCDGGHAVCMTTEKI 163
           RR+ +  HA+C+T  +I
Sbjct: 248 RRRIEIAHALCLTERQI 264


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 213 RRQCDGGHAVCMTTEKI 163
           RR+ +  HA+C+T  +I
Sbjct: 36  RRRIEIAHALCLTERQI 52


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 213 RRQCDGGHAVCMTTEKI 163
           RR+ +  HA+C+T  +I
Sbjct: 272 RRRIEIAHALCLTERQI 288


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 213 RRQCDGGHAVCMTTEKI 163
           RR+ +  HA+C+T  +I
Sbjct: 248 RRRIEIAHALCLTERQI 264


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 213 RRQCDGGHAVCMTTEKI 163
           RR+ +  HA+C+T  +I
Sbjct: 185 RRRIEIAHALCLTERQI 201


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 213 RRQCDGGHAVCMTTEKI 163
           RR+ +  HA+C+T  +I
Sbjct: 244 RRRIEIAHALCLTERQI 260


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,771
Number of Sequences: 336
Number of extensions: 2951
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)