Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_K23
(575 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 43 4e-05
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 42 6e-05
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 40 2e-04
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 40 3e-04
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 39 6e-04
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 37 0.002
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 37 0.002
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 35 0.007
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 35 0.010
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 33 0.030
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 31 0.16
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 31 0.16
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 29 0.37
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 29 0.37
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 29 0.49
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 29 0.49
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 28 0.85
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 28 1.1
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 27 1.5
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 27 1.5
SPBC1604.21c |ptr3|uba1, SPBC211.09|ubiquitin activating enzyme ... 27 2.0
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 27 2.6
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 27 2.6
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 27 2.6
SPAC890.04c |||ribosome biogenesis protein Ytm1 |Schizosaccharom... 27 2.6
SPAC824.04 |||WD repeat protein|Schizosaccharomyces pombe|chr 1|... 26 3.4
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 26 3.4
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 26 4.5
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 26 4.5
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 26 4.5
SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit Swd2|Schizosa... 25 6.0
SPBC365.02c |cox10||protoheme IX farnesyltransferase|Schizosacch... 25 7.9
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 25 7.9
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 42.7 bits (96), Expect = 4e-05
Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
Frame = +1
Query: 19 DLKNLETYAIIGFDGSAIRGLKVHPDGEHVVYPMGNK-VCIQEWKTKKMYFLSGHTNSVS 195
D+ Y ++ I L DG+ +V G++ VC+ + + + + + V+
Sbjct: 362 DIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHTDDGVT 421
Query: 196 TVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTFSSDERYMIS 375
TV SP G ++ +G ++ + +IW H H+ V ++ FS D +Y++S
Sbjct: 422 TVMFSPDGQFIAAGSLDKV-----IRIWTSSGTLVEQLHG-HEESVYSVAFSPDGKYLVS 475
Query: 376 LGGRDDGYVVLWD 414
G D + LW+
Sbjct: 476 --GSLDNTIKLWE 486
Score = 38.7 bits (86), Expect = 6e-04
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Frame = +1
Query: 91 PDGEHVVYPMGNKVCIQEWKTKKMYF--LSGHTNSVSTVALSPKGTYVGSGQINHIGFKA 264
PDG+ + +KV I+ W + L GH SV +VA SP G Y+ SG +++
Sbjct: 427 PDGQFIAAGSLDKV-IRIWTSSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDN----- 480
Query: 265 SAKIWDFKKKAQIGSHELHKVRVEALTFSSDERYMISLGGRDDG 396
+ K+W+ + + + + + TF+ + +++S+ DG
Sbjct: 481 TIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDG 524
Score = 33.1 bits (72), Expect = 0.030
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 70 IRGLKVHPDGEHVVYPMGNKVCIQEWKTKKMYF---LSGHTNSVSTVALSPKGTYVGSGQ 240
I + V PDG+ ++ ++ IQ W + L GH NSV +VA+SP G +G
Sbjct: 515 ILSVTVSPDGKWIISGSKDRT-IQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGS 573
Query: 241 INHIGFKASAKIWDFK 288
+ A+IW ++
Sbjct: 574 GD-----LRARIWSYE 584
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 41.9 bits (94), Expect = 6e-05
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Frame = +1
Query: 97 GEHVVYPMGNKVCIQE-WKTKKMYFLSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAK 273
GE +VYP + I+E K + + + HT + SP G YV SG + + +
Sbjct: 29 GERIVYPANKAIIIREIEKQENCFQYNEHTAPTTVARFSPSGYYVASGD-----NQGNVR 83
Query: 274 IWDFKKKAQIGSHELHKV--RVEALTFSSDERYMISLGGRDDGY 399
IWD + +I +++ + R+ L + D + +I++G + Y
Sbjct: 84 IWDCAGEDKILKNQVTAISGRITDLDWDGDSQRIIAVGEGKERY 127
Score = 25.8 bits (54), Expect = 4.5
Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = +1
Query: 106 VVYPMGNKVCIQEWKTKKMYFLSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDF 285
VV GN + K + + GH S++ LSP T+ + + + WD
Sbjct: 290 VVNSKGNLTYLNPSDCKVIDTIYGHQRSITAATLSPDATHFYTA-----SYDGTVLSWDI 344
Query: 286 -KKKAQIGSHELHKVRVEALTFSSDERYMISLGGRD 390
K+KA E H +V + + D ++I++G D
Sbjct: 345 GKQKAFPLVGESHTNQVMQMIMADD--HVITIGMDD 378
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 40.3 bits (90), Expect = 2e-04
Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Frame = +1
Query: 88 HPDGEHVVYPMGNKVCIQEWKTKKMYFL---SGHTNSVSTVALSPKGTYVGSGQINHIGF 258
HP+ +V+ +K C + W + + + +GHT V+ VA++P G + S +
Sbjct: 472 HPNSAYVLTGSSDKTC-RLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGL-- 528
Query: 259 KASAKIWDFKKKAQIGSHELHKVRVEALTFSSDERYMISLGGRDDGYVVLWD 414
+WD +I + H+ + +L+FS + ++S G D V WD
Sbjct: 529 ---IHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVS--GGSDCTVRAWD 575
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 39.9 bits (89), Expect = 3e-04
Identities = 31/136 (22%), Positives = 50/136 (36%), Gaps = 2/136 (1%)
Frame = +1
Query: 154 KKMYFLSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRV 333
+++ + H V T+ + P T + +G G + K+WD S H +
Sbjct: 94 RRIKSMKAHETPVITMTIDPTNTLLATG-----GAEGLVKVWDIAGAYVTHSFRGHGGVI 148
Query: 334 EALTFSSDERYMISLGGRDDGYVVLWDCVXXXXXXXXXXXXXXXXXXMTLTALNARVNSF 513
AL F + + G DD V LWD + +T SF
Sbjct: 149 SALCFGKHQNTWVLASGADDSRVRLWD-LNSSRSMAVFEGHSSVIRGLTFEP----TGSF 203
Query: 514 VTGG--DSNLRVWNIR 555
+ G D ++VWNI+
Sbjct: 204 LLSGSRDKTVQVWNIK 219
Score = 30.3 bits (65), Expect = 0.21
Identities = 33/143 (23%), Positives = 54/143 (37%), Gaps = 10/143 (6%)
Frame = +1
Query: 154 KKMYFLSGHTNSVSTVALSPKG-----TYVGSGQ----INHIGFKASAKIWDFKKKAQIG 306
K ++ +GHT SV+ VAL P T++ S + + DF +A +
Sbjct: 401 KCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRA-VW 459
Query: 307 SHELHKVRVEALTFSSDERYMISLGGRDDGYVVLWDCVXXXXXXXXXXXXXXXXXXMTLT 486
+ + H V A+ S D R + S D + LWD +
Sbjct: 460 TIKAHDRDVNAIQVSKDGRIIAS--ASQDKTIKLWD----SSTGEVVGVLRGHRRGVWAC 513
Query: 487 ALNARVNSFVTG-GDSNLRVWNI 552
+ N +G GD +R+WN+
Sbjct: 514 SFNPFSRQLASGSGDRTIRIWNV 536
Score = 27.9 bits (59), Expect = 1.1
Identities = 16/89 (17%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +1
Query: 151 TKKMYFLSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHEL-HKV 327
++ M GH++ + + P G+++ SG + + ++W+ KK++ + + + H V
Sbjct: 179 SRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRD-----KTVQVWNIKKRSAVRTIPVFHSV 233
Query: 328 RVEALTFSSDERYMISLGGRDDGYVVLWD 414
E ++ G + ++ WD
Sbjct: 234 EAIGWVNGQPEEKILYTAG-EGNLILAWD 261
Score = 27.5 bits (58), Expect = 1.5
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 19 DLKNLETYAIIGFDGSAIRGLKVHPDGEHVVYPMGNKVCIQEWKTKK 159
DL + + A+ S IRGL P G ++ +K +Q W KK
Sbjct: 175 DLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKT-VQVWNIKK 220
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 38.7 bits (86), Expect = 6e-04
Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 5/159 (3%)
Frame = +1
Query: 88 HPDGEHVVYPMGNKVCIQEWKTK---KMYFLSGHTNSVSTVALSPKGTYVGSGQINHIGF 258
HP G+++V + + W ++ GH+ + ++A P G+ V SG G
Sbjct: 274 HPSGDYLVSASFDTTW-RLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSG-----GN 327
Query: 259 KASAKIWDFKKKAQIGSHELHKVRVEALTFSSDERYMISLGGRDDGYVVLWDCVXXXXXX 438
A +IWD + I + H ++ A+ +S + Y ++ DD V +WD
Sbjct: 328 DAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPN-GYQLATSSADD-TVKIWD---LRKVS 382
Query: 439 XXXXXXXXXXXXMTLTALNARVNSFV--TGGDSNLRVWN 549
+ + + VN F+ +G D +++WN
Sbjct: 383 LAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLWN 421
Score = 34.3 bits (75), Expect = 0.013
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Frame = +1
Query: 124 NKVCIQEWKTKK---MYFLSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKK 294
N VC+ WK + + L GH V VA P G Y+ S F + ++WD
Sbjct: 245 NTVCL--WKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSA-----SFDTTWRLWDVHTG 297
Query: 295 AQIGSHELHKVRVEALTFSSDERYMISLGGRDDGYVVLWD 414
++ E H + ++ D ++S GG +D +WD
Sbjct: 298 VELLMQEGHSEGIFSIACQPDGS-LVSSGG-NDAIGRIWD 335
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 37.1 bits (82), Expect = 0.002
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +1
Query: 175 GHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTFSS 354
GHT VS V +SP G+ SG G + +WD + + S E K + AL FS
Sbjct: 190 GHTGYVSAVTISPDGSLCASG-----GRDGTLMLWDLNESTHLYSLEA-KANINALVFSP 243
Query: 355 DERYMISLGG 384
+ ++ + G
Sbjct: 244 NRYWLCAATG 253
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 37.1 bits (82), Expect = 0.002
Identities = 20/85 (23%), Positives = 46/85 (54%)
Frame = +1
Query: 160 MYFLSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEA 339
+Y LS +++ T+ ++ G ++ G + +G +W+++ ++ + + H +
Sbjct: 289 LYQLSITQSNIDTLTVNSTGDWIAIGS-SKLG---QLLVWEWQSESYVLKQQSHYDALST 344
Query: 340 LTFSSDERYMISLGGRDDGYVVLWD 414
L +SSD + +I+ G DDG + +WD
Sbjct: 345 LQYSSDGQRIIT--GADDGKIKVWD 367
Score = 32.3 bits (70), Expect = 0.052
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 91 PDGEHVVYPMGNKVCIQEWKTKKMY-FLSGHTNSVSTVALSPKGT 222
PDG ++ P+GN+V + K Y F + ++S +ALSP T
Sbjct: 24 PDGFSILSPVGNRVSVYNLKDNTSYTFPFENHKNISHIALSPTST 68
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 35.1 bits (77), Expect = 0.007
Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 7/122 (5%)
Frame = +1
Query: 70 IRGLKVHPDGEHVVYPMGNKV--CIQ---EWKTKKMYFLSGHTNSVSTVALSPKGTYVGS 234
IR L VHP ++ + C WK + + GH+ V ++A++PK T +
Sbjct: 101 IRALVVHPTQPFLLTSSDDMTIKCFNWDMSWKCVQTF--EGHSRYVMSLAINPKDTNTFA 158
Query: 235 GQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTF--SSDERYMISLGGRDDGYVVL 408
+ K+W F + + H V + + + D+ Y+I+ G DD + +
Sbjct: 159 SSC----LDGTVKVWSFGSSVANFTLQAHDRGVNYVNYYPAGDKPYLITAG--DDNLIKV 212
Query: 409 WD 414
WD
Sbjct: 213 WD 214
Score = 25.0 bits (52), Expect = 7.9
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Frame = +1
Query: 124 NKVCIQEWKTKK-MYFLSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQ 300
N + + +++TK + L GHTN+VS K + SG + + KIW
Sbjct: 208 NLIKVWDYQTKACVRILEGHTNNVSFAFFHSKFPIIISGSED-----GTVKIW------- 255
Query: 301 IGSHELHKVRVEALTFSSDERYMISLGGRDDGYVVL 408
H L +++ FS D + I+ +D+G V +
Sbjct: 256 ---HTLSYSLIKSYNFSLDRAWCIA-QNKDNGLVTV 287
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 34.7 bits (76), Expect = 0.010
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Frame = +1
Query: 91 PDGEHVV--YPMGNKVCIQEWKTKKMYFLSGHTNSVSTVALSPKGTYVGSGQINHIGFKA 264
P+G +V + G I + + LSGHT+ V +VA SP T + + G
Sbjct: 155 PNGRFIVSGHQTGQLFLISTETGRLFHVLSGHTSPVRSVAFSPGSTLLAAA-----GDSK 209
Query: 265 SAKIWDFKKKAQIGSHELHKVRVEALTFSSDERYMISLGGRDDGYVVLWD 414
I+D Q+G H + A+ F+ ++S +G + +WD
Sbjct: 210 MITIYDVLSGDQVGQLRGHAAWIFAVAFNPVGDLLLS--ADVEGKIKIWD 257
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 33.1 bits (72), Expect = 0.030
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = +1
Query: 190 VSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTFSSDERYM 369
V T+A SP G Y+ +G + K+WD + H+ + +L FS + R++
Sbjct: 363 VRTIAFSPDGKYLVTGTEDR-----QIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFI 417
Query: 370 ISLGGRDDGYVVLWD 414
+S G D LWD
Sbjct: 418 VS--GSGDRTARLWD 430
Score = 30.7 bits (66), Expect = 0.16
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 172 SGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTFS 351
+GHT+ V +VA+SP + SG + S + WD + + + HK V ++ FS
Sbjct: 535 TGHTDFVLSVAVSPDSRWGLSGSKDR-----SMQFWDLQTGQSYLTCQGHKNSVISVCFS 589
Query: 352 SDERYMISLGG 384
D R S G
Sbjct: 590 PDGRQFASGSG 600
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 30.7 bits (66), Expect = 0.16
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 154 KKMYFLSGHTNSVSTVALSPKGTYVGSGQINHI 252
K++ +S HT +V++V SP G Y+ SG + +
Sbjct: 65 KQLCCMSTHTGTVTSVRFSPNGQYLASGSDDRV 97
Score = 27.5 bits (58), Expect = 1.5
Identities = 20/91 (21%), Positives = 39/91 (42%)
Frame = +1
Query: 139 QEWKTKKMYFLSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHEL 318
+ W++ + L GH N + + S V S +G +S +W+ ++ E
Sbjct: 122 ENWRSYRR--LLGHDNDIQDLCWSYDSQLVVS-----VGLDSSIIVWNGTTFERLKRIEA 174
Query: 319 HKVRVEALTFSSDERYMISLGGRDDGYVVLW 411
H+ V+ +TF +Y + DD + +W
Sbjct: 175 HQSHVKGITFDPAGKYFAT--ESDDRTIKVW 203
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 30.7 bits (66), Expect = 0.16
Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 1/131 (0%)
Frame = +1
Query: 169 LSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTF 348
L+GH +V +A+SP+ Y+ S G K WD + I + H V AL
Sbjct: 201 LTGHIATVRGLAVSPRHPYLFS-----CGEDKMVKCWDLETNKVIRHYHGHLSGVYALKL 255
Query: 349 SSDERYMISLGGRDDGYVVLWDCVXXXXXXXXXXXXXXXXXXMTLTALNARVNSFVTGG- 525
+++ G D +WD + + + + +V VTG
Sbjct: 256 HPTLDVLVTAG--RDAVARVWD-MRTRQNVHVLSGHKSTVASLAVQEFDPQV---VTGSM 309
Query: 526 DSNLRVWNIRA 558
DS +R+W++ A
Sbjct: 310 DSTIRLWDLAA 320
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 29.5 bits (63), Expect = 0.37
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +1
Query: 235 GQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTFSSDERYMISLGG 384
GQ+ G + +WD++ + E H V+A+ +S +R +++ GG
Sbjct: 262 GQLASGGNDNNLFVWDYRSSRPLHKFEEHTAAVKAIGWSPHQRGILASGG 311
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 29.5 bits (63), Expect = 0.37
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Frame = +1
Query: 154 KKMYFLSGHTNSVSTVALSPKGTYVGSGQINHIGFKAS-------AKIWDFKKKAQIGSH 312
+ +Y + + SVS +A + + TYV S + +H G S I+D + + ++ +
Sbjct: 200 RNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTM 259
Query: 313 ELHKVRVEALTFSSDERYMISLGGR 387
H+ RV L+++ R+++S G R
Sbjct: 260 AGHQARVGCLSWN---RHVLSSGSR 281
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 29.1 bits (62), Expect = 0.49
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 7/172 (4%)
Frame = +1
Query: 70 IRGLKVHPDGEHVVYPMGNKVCIQEWKTKK---MYFLSGHTNSVSTVALSPKGTYVGSGQ 240
I +K + G++V+ GN+ ++ W K ++ +GH + + + L T S
Sbjct: 17 INVVKYNRTGKYVL-AAGNERVVRLWNVKSGACIHEYAGHGHEILDLDLVYDSTKFAS-- 73
Query: 241 INHIGFKASAKIWDF---KKKAQIGSHELHKVRVEALTFSSDERYMISLGGRDDGYVVLW 411
G ++WD K ++G H ++ + ++ D + S G D V LW
Sbjct: 74 ---CGGDKFIQVWDVNTGKVDRRLGGH---LAQINTIRYNEDSSILAS--GSFDSKVRLW 125
Query: 412 DCVXXXXXXXXXXXXXXXXXXMTLTALNARVNSFVTGG-DSNLRVWNIRAET 564
DC ++++++ + VTG D LR ++IR T
Sbjct: 126 DC----RSNSFSPIQVLADAKDSVSSIDIAEHLIVTGSTDGTLRTYDIRKGT 173
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 29.1 bits (62), Expect = 0.49
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 15/89 (16%)
Frame = +1
Query: 169 LSGHTNSVSTVALSPKGTYV-GSGQINHIGFKASAKIWDFKK-KAQIGSHELHKV----- 327
LSGHT +V V PK +V SG + + ++WD +K + +LH
Sbjct: 185 LSGHTGNVLAVDWCPKNEFVLASGSAD-----GTCRLWDIRKVSSSFACMDLHNKYLPSN 239
Query: 328 --------RVEALTFSSDERYMISLGGRD 390
V L ++SD RY+ S G D
Sbjct: 240 QTNISHYGTVNGLAWTSDARYLASCGTDD 268
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 28.3 bits (60), Expect = 0.85
Identities = 19/80 (23%), Positives = 37/80 (46%)
Frame = +1
Query: 175 GHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTFSS 354
GHTN+V+ +A G ++ + + + K+WD + + +++ HK V L
Sbjct: 81 GHTNNVTAIAFHCDGKWLATSSED-----GTVKVWDMRAPSVQRNYD-HKSPVNDLLIHP 134
Query: 355 DERYMISLGGRDDGYVVLWD 414
++ ++S G V WD
Sbjct: 135 NQGELLSCD--QSGRVRAWD 152
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 27.9 bits (59), Expect = 1.1
Identities = 20/82 (24%), Positives = 37/82 (45%)
Frame = +1
Query: 169 LSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTF 348
L GH +S V + Y+ S + + +IWDF+K+ + + H V ++ F
Sbjct: 92 LFGHYRGISQVKWATGSKYLASASDDK-----TIRIWDFEKRCSVRCLKGHTNYVSSIDF 146
Query: 349 SSDERYMISLGGRDDGYVVLWD 414
+ ++S G D V +W+
Sbjct: 147 NPLGTLLVS--GSWDETVRIWN 166
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 27.5 bits (58), Expect = 1.5
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 169 LSGHTNSVSTVALSPKGT-YVGSGQINHIGFKASAK-IWDFK 288
+ GH ++T+A+ PKGT Y G+ ++ K +DFK
Sbjct: 284 VKGHFGPINTIAVHPKGTGYASGGEDGYVRVHFFDKNYFDFK 325
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 27.5 bits (58), Expect = 1.5
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 148 KTKKMYF-LSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIW 279
++KKM F L GH + V V SP G V SG G + +IW
Sbjct: 461 RSKKMKFDLPGHEDQVFAVDWSPDGQRVASG-----GADKAVRIW 500
>SPBC1604.21c |ptr3|uba1, SPBC211.09|ubiquitin activating enzyme
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1012
Score = 27.1 bits (57), Expect = 2.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -1
Query: 176 PLRKYIFFVFHSCMQTLFPIGYTTCSPSGCTLSPLIA 66
PL++Y +F + + I TC P GC IA
Sbjct: 379 PLKQYFYFDSLESLPSSVTISEETCKPRGCRYDGQIA 415
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 26.6 bits (56), Expect = 2.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 169 LSGHTNSVSTVALSPKGTYVGS 234
L GHTN+V +A SP G + S
Sbjct: 463 LQGHTNTVWALAFSPNGNTLAS 484
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 26.6 bits (56), Expect = 2.6
Identities = 22/83 (26%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
Frame = +1
Query: 175 GHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWD-FKKKAQIGSHELHKVRVEALTFS 351
GHT V P G+Y SG G +W+ F G K + L +S
Sbjct: 48 GHTAEVLVARFDPSGSYFASG-----GMDRQILLWNVFGDVKNYGVLNGCKGAITDLQWS 102
Query: 352 SDERYMISLGGRDDGYVVLWDCV 420
D R + D +++ WD V
Sbjct: 103 RDSRVVYC--SSSDTHLMSWDAV 123
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 26.6 bits (56), Expect = 2.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 113 YTTCSPSGCTLSPLIAEPSNP 51
YTT PSG + P++ PS P
Sbjct: 363 YTTSVPSGMSRHPMLMNPSTP 383
>SPAC890.04c |||ribosome biogenesis protein Ytm1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 26.6 bits (56), Expect = 2.6
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 169 LSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFK 288
LSGH N VS ++ SP+ Y+ ++H + ++WD +
Sbjct: 351 LSGHKNLVSGLSASPENPYM-FASVSH---DNTCRVWDVR 386
>SPAC824.04 |||WD repeat protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 26.2 bits (55), Expect = 3.4
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +1
Query: 145 WKTKKMYFLSGHTNSVSTVALSP 213
+ K++ + SGHT+ VS++ +SP
Sbjct: 96 YDNKRISYFSGHTDIVSSIEVSP 118
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 26.2 bits (55), Expect = 3.4
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Frame = +1
Query: 169 LSGHTNSVSTVALSPKGTY---VGSGQINHI--GFKASAKIWDFKKKAQIGSHELHKV 327
+SGHT SV VA P+G + G+ Q + FK W + QI ++L +
Sbjct: 366 ISGHTKSVKGVAWDPEGKFYLSAGTDQTTRLFARFKKD-NAWHEMARPQIHGYDLTSI 422
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 4.5
Identities = 22/82 (26%), Positives = 35/82 (42%)
Frame = +1
Query: 169 LSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTF 348
L GHT V V++SP+ ++ S + GF ++W K+ I + H + + F
Sbjct: 399 LIGHTRPVFGVSISPQKEFILS--CSEDGF---TRLWSKDTKSTIVKYAGHNAPIWDVQF 453
Query: 349 SSDERYMISLGGRDDGYVVLWD 414
S Y + D LWD
Sbjct: 454 SPFGYYFAT--ASHDQTARLWD 473
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 25.8 bits (54), Expect = 4.5
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 118 MGNKVCIQEWKT-KKMYFLSGHTNSVSTVALSPKGTYVGSG 237
M N+V + + + ++ L GHT+ V +A+SP G + +G
Sbjct: 482 MENEVALWNYPSVSRVGTLKGHTDRVLYLAMSPNGENIVTG 522
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 25.8 bits (54), Expect = 4.5
Identities = 18/81 (22%), Positives = 34/81 (41%)
Frame = +1
Query: 169 LSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTF 348
L+GH +S+ + S GTY+ +G G + ++W K + E +
Sbjct: 100 LTGHKDSIVAIDWSFDGTYIATG-----GMDSQVRLW--KSSTGFEFITAFETVDEIVWL 152
Query: 349 SSDERYMISLGGRDDGYVVLW 411
S + + G +DG + +W
Sbjct: 153 SWHPKGLFLAAGCNDGSIWMW 173
>SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit
Swd2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 357
Score = 25.4 bits (53), Expect = 6.0
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 325 VRVEALTFSSDERYMISLGGRDDGYVV 405
VR+ + FS+D +Y++ G D YV+
Sbjct: 202 VRIANVEFSTDGKYLLLTTGNDFHYVI 228
>SPBC365.02c |cox10||protoheme IX
farnesyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 387
Score = 25.0 bits (52), Expect = 7.9
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -2
Query: 397 NHRPDPRVISYSARPMRTLELRPAP 323
N PDP+V+++ ++ M+ L P P
Sbjct: 60 NAAPDPQVLTFLSKRMQAAPLYPKP 84
>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 512
Score = 25.0 bits (52), Expect = 7.9
Identities = 9/18 (50%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +1
Query: 502 VNSFVT-GGDSNLRVWNI 552
+N F T GGDS +R+W +
Sbjct: 31 LNKFATCGGDSKIRIWQL 48
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,357,413
Number of Sequences: 5004
Number of extensions: 47316
Number of successful extensions: 161
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 159
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 246098644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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