Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_K23
(575 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13379| Best HMM Match : WD40 (HMM E-Value=1.3e-39) 79 3e-15
SB_13470| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 4e-06
SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_42598| Best HMM Match : CtaG_Cox11 (HMM E-Value=0) 46 3e-05
SB_40766| Best HMM Match : WD40 (HMM E-Value=1.19993e-41) 40 0.001
SB_9416| Best HMM Match : WD40 (HMM E-Value=0) 40 0.001
SB_59771| Best HMM Match : WD40 (HMM E-Value=3.9e-09) 39 0.003
SB_17334| Best HMM Match : WD40 (HMM E-Value=3.1e-30) 36 0.024
SB_44731| Best HMM Match : WD40 (HMM E-Value=1.1e-11) 35 0.055
SB_6741| Best HMM Match : WD40 (HMM E-Value=0) 33 0.13
SB_24139| Best HMM Match : WD40 (HMM E-Value=8.29989e-42) 33 0.13
SB_22072| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_4548| Best HMM Match : WD40 (HMM E-Value=6.7e-35) 33 0.22
SB_6763| Best HMM Match : WD40 (HMM E-Value=4.6e-24) 32 0.29
SB_45927| Best HMM Match : WD40 (HMM E-Value=9e-18) 31 0.51
SB_41443| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_17121| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_54574| Best HMM Match : WD40 (HMM E-Value=0) 31 0.89
SB_36285| Best HMM Match : DUF1581 (HMM E-Value=5.7) 30 1.6
SB_42057| Best HMM Match : DUF1581 (HMM E-Value=2.5) 30 1.6
SB_29499| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_5612| Best HMM Match : WD40 (HMM E-Value=4.4e-18) 30 1.6
SB_48711| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_31407| Best HMM Match : TolA (HMM E-Value=2.5) 29 2.7
SB_43805| Best HMM Match : YscO (HMM E-Value=6) 29 2.7
SB_43298| Best HMM Match : WD40 (HMM E-Value=1.7e-30) 29 2.7
SB_7988| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_34456| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_22215| Best HMM Match : Rib_hydrolayse (HMM E-Value=0.035) 28 4.8
SB_9785| Best HMM Match : Cytochrom_B_C (HMM E-Value=7.5) 28 6.3
SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_3361| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_2995| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_30925| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
>SB_13379| Best HMM Match : WD40 (HMM E-Value=1.3e-39)
Length = 574
Score = 78.6 bits (185), Expect = 3e-15
Identities = 35/74 (47%), Positives = 51/74 (68%)
Frame = +1
Query: 19 DLKNLETYAIIGFDGSAIRGLKVHPDGEHVVYPMGNKVCIQEWKTKKMYFLSGHTNSVST 198
D+ LE ++IGF G+ GL VHPD +H++YP+GN V I++ KT K LSGHT++V+
Sbjct: 12 DVGRLELESVIGFAGAVPNGLLVHPDRDHLIYPLGNTVVIEQIKTGKQSCLSGHTDNVTC 71
Query: 199 VALSPKGTYVGSGQ 240
VA+S G Y+ S +
Sbjct: 72 VAVSKSGRYLASAK 85
>SB_13470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1483
Score = 48.4 bits (110), Expect = 4e-06
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Frame = +1
Query: 46 IIGFDGSAIRGLKVHPDGEHVVYPMGNKVCIQEWKTKKMYFLSGHTNSVSTVALSPKGTY 225
+ G+ G R + +VY + + T K F + HT+ + +A+ P +
Sbjct: 434 VFGYRGYDCRNNVFYTQTGDIVYHVAALGIVYNRDTHKQRFYNAHTDDILCLAIHPVKDF 493
Query: 226 VGSGQINHIGFKASAKIWDFKKKAQIGSHE-LHKVRVEALTFSSDERYMISLGGRDDGYV 402
+ +GQ +G + +WD + + + H+ V A+ FS D R + S+G D+ +
Sbjct: 494 IATGQ---VGRDPAVHVWDAEAMKTLSILKGQHERGVCAVDFSGDGRKLASVGLDDNHCI 550
Query: 403 VLWD 414
V+WD
Sbjct: 551 VVWD 554
>SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1649
Score = 48.0 bits (109), Expect = 5e-06
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 2/163 (1%)
Frame = +1
Query: 70 IRGLKVHPDGEHVVYPMGN-KVCIQEWKT-KKMYFLSGHTNSVSTVALSPKGTYVGSGQI 243
I G+ V PD + ++ + + + +++T K++ L HT V T+ALSP ++ SG
Sbjct: 709 ILGIAVTPDTKKIITGGADGSIRVWDYETGKELNKLLDHTKLVYTLALSPHADFLVSGAF 768
Query: 244 NHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTFSSDERYMISLGGRDDGYVVLWDCVX 423
+H + KIWD + + + + HK V + + D + +IS D V +WD V
Sbjct: 769 DH-----TVKIWDMDTLSLVHTLKGHKNWVSGVLVTPDSKRIIS--SSYDKTVKIWD-VE 820
Query: 424 XXXXXXXXXXXXXXXXXMTLTALNARVNSFVTGGDSNLRVWNI 552
+ +T+ R+ S D LR+WN+
Sbjct: 821 TCAFVNSLDGHDGHVRGIAITSDGRRLVS--ASQDRTLRIWNL 861
Score = 45.6 bits (103), Expect = 3e-05
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
Frame = +1
Query: 34 ETYAIIGFDGSAIRGLKVHPDGEHVVYPMGNKVCIQEWKTK---KMYFLSGHTNSVSTVA 204
E +++G S I + V PDG V+ G+ ++ W + ++ L GH+ SV V
Sbjct: 908 EVRSLVGHT-SDIFAVAVTPDGSKVI-SSGDDTQVKVWSLESGEELASLHGHSESVRIVT 965
Query: 205 LSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTFSSDERYMISLGG 384
+SP G + SG + A+ KIW I HK + + S + + ++ G
Sbjct: 966 VSPDGLTIVSGSED-----ATFKIWRIASMNTISPVLGHKRTINGIALSKNGDFCVT--G 1018
Query: 385 RDDGYVVLWD 414
DD V +WD
Sbjct: 1019 SDDSLVKVWD 1028
Score = 38.3 bits (85), Expect = 0.004
Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 1/133 (0%)
Frame = +1
Query: 154 KKMYFLSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRV 333
K++ L GHT+ + VA++P G+ V S G K+W + ++ S H V
Sbjct: 907 KEVRSLVGHTSDIFAVAVTPDGSKVISS-----GDDTQVKVWSLESGEELASLHGHSESV 961
Query: 334 EALTFSSDERYMISLGGRDDGYVVLWDCVXXXXXXXXXXXXXXXXXXMTLTALNARVNSF 513
+T S D ++S G +D +W + AL+ +
Sbjct: 962 RIVTVSPDGLTIVS--GSEDATFKIW----RIASMNTISPVLGHKRTINGIALSKNGDFC 1015
Query: 514 VTGGDSNL-RVWN 549
VTG D +L +VW+
Sbjct: 1016 VTGSDDSLVKVWD 1028
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/83 (20%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +1
Query: 10 VDMDLKNLETYAIIGFDGSAIRGLKVHPDGEHVVYPMGNKVCIQEWK--TKKMYFLSGHT 183
+ D+K+ E + P G+ VV G+ +++W + ++ + H+
Sbjct: 1520 ITWDIKSREVIRSANGHWGRYNVVSFFPQGDQVV-SNGHHFTLKQWDLGSGRIKHIYPHS 1578
Query: 184 NSVSTVALSPKGTYVGSGQINHI 252
N ++T+ + P G Y+ +G + I
Sbjct: 1579 NEITTLCVLPCGRYLVTGSRDKI 1601
>SB_42598| Best HMM Match : CtaG_Cox11 (HMM E-Value=0)
Length = 1498
Score = 45.6 bits (103), Expect = 3e-05
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Frame = +1
Query: 112 YPMGNKVCIQEWKTKKMYFLSGHTNSVSTVALSPKGTYVGSGQ-INHIGFKASAKIWDFK 288
Y G+ V I++ + L GH VST+ G + S + + IWD +
Sbjct: 509 YTSGSIVVIEDLHSGGQKHLIGHVEEVSTITCQNDGLVLASASGSSETSESSQIYIWDIQ 568
Query: 289 KKAQIGSHELHKVRVEALTFSSDERYMISLGGRDDGYVVLWD 414
++ H V L +S D+R +IS+G D VV+W+
Sbjct: 569 EETCTKVLSYHPHEVVCLAYSRDDRMLISVGDFRDCSVVVWN 610
>SB_40766| Best HMM Match : WD40 (HMM E-Value=1.19993e-41)
Length = 1487
Score = 39.9 bits (89), Expect = 0.001
Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 4/123 (3%)
Frame = +1
Query: 19 DLKNLETYAIIGFDGSAIRGLKVHPDGEHVVYPMGN--KVCIQEWKTKKMYFLS--GHTN 186
+L + + I + V+P GE + + + ++ + EW+++ Y L GH
Sbjct: 1194 ELPDFNLIQTLSISQQTISAVAVNPTGEWLAFGCTSLGQLLVWEWQSES-YILKQQGHYY 1252
Query: 187 SVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTFSSDERY 366
++ +A SP G Y+ +G G K+W+ + H V A+TFS + +
Sbjct: 1253 DMNVLAYSPDGNYIATG-----GDDGKVKLWNTMTGFCFVTFHEHSASVTAVTFSPNGQV 1307
Query: 367 MIS 375
++S
Sbjct: 1308 VLS 1310
>SB_9416| Best HMM Match : WD40 (HMM E-Value=0)
Length = 700
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/81 (30%), Positives = 42/81 (51%)
Frame = +1
Query: 169 LSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTF 348
LSG +S+ ++A++P GT + SG I ++WD + ++ + H V+A+
Sbjct: 165 LSGQKDSIYSLAMNPAGTVLISGSTEKI-----LRVWDPRSCEKVMKLKGHMDNVKAVVI 219
Query: 349 SSDERYMISLGGRDDGYVVLW 411
SD + +S G DG V LW
Sbjct: 220 DSDGQQCLS--GSSDGTVRLW 238
Score = 34.7 bits (76), Expect = 0.055
Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 6/143 (4%)
Frame = +1
Query: 148 KTKKMYFLSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKV 327
K M L HT+ V+ + L G + S + + K+WD + + + HK
Sbjct: 65 KDPYMVSLEHHTDWVNDIVLCRNGKTILSASSD-----TTVKVWDATRGFCMSTLRTHKD 119
Query: 328 RVEALTFSSDERYMISLGGRDDGYVVLWD-----CVXXXXXXXXXXXXXXXXXXMTLTAL 492
V+AL ++S + ++ S GG D + LWD + + A+
Sbjct: 120 YVQALAYASCKEHVAS-GGLDK-QIFLWDVNTLTALTATNNTVTTSSLSGQKDSIYSLAM 177
Query: 493 NARVNSFVTGG-DSNLRVWNIRA 558
N ++G + LRVW+ R+
Sbjct: 178 NPAGTVLISGSTEKILRVWDPRS 200
>SB_59771| Best HMM Match : WD40 (HMM E-Value=3.9e-09)
Length = 204
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +1
Query: 166 FLSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHE-LHKVRVEAL 342
F GHT+ + + + +V +GQ+ A IWD + + HK + +
Sbjct: 21 FYMGHTDDILCLTIHDVKDFVATGQVGRF---AETHIWDATSMKTVSVLKGFHKRGIICV 77
Query: 343 TFSSDERYMISLGGRDDGYVVLWD 414
FS D + + +G DD + +WD
Sbjct: 78 DFSGDGKKLADVGLDDDHSICIWD 101
>SB_17334| Best HMM Match : WD40 (HMM E-Value=3.1e-30)
Length = 1292
Score = 35.9 bits (79), Expect = 0.024
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Frame = +1
Query: 73 RGLKVHPDGEHVVYPMGNKVC----IQEWKTKKMYFLSGHTNSVSTVALSPKGTYVGSGQ 240
R L H D ++ G+ C I+ +T Y SGHT V +++L+P SG
Sbjct: 75 RELPGHTDDCQIITSSGDMTCALWDIETAQTISTY--SGHTGDVMSLSLNPNNQSFVSGA 132
Query: 241 INHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTF 348
+ ASAK+WD + + + H+ + A+ F
Sbjct: 133 CD-----ASAKLWDIRGGTCVQTFTGHESDINAVAF 163
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +1
Query: 172 SGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFK--KKAQIGSHELHKVRVEALT 345
+GH + ++ VA P G G+G + A+ +++D + ++ + SH+ + ++
Sbjct: 152 TGHESDINAVAFFPSGFAFGTGSDD-----ATCRLFDIRADQELMMYSHDNIICGITSVA 206
Query: 346 FSSDERYMISLGGRDDGYVVLWD 414
FS R + L G DD +WD
Sbjct: 207 FSKSGRLL--LAGYDDFNCNVWD 227
>SB_44731| Best HMM Match : WD40 (HMM E-Value=1.1e-11)
Length = 256
Score = 34.7 bits (76), Expect = 0.055
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 175 GHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDF 285
GHT+++ T++ SP GT + SG G + ++WDF
Sbjct: 179 GHTDTIHTMSFSPDGTLLASG-----GMDGAVRVWDF 210
>SB_6741| Best HMM Match : WD40 (HMM E-Value=0)
Length = 714
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/82 (24%), Positives = 41/82 (50%)
Frame = +1
Query: 169 LSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTF 348
L GH V++ ++SP GT + + + ++ +W+ + + E H V F
Sbjct: 52 LDGHNYHVNSCSVSPFGTLMATASTD-----STLMLWNLETGECLAVLEGHTGAVRVCRF 106
Query: 349 SSDERYMISLGGRDDGYVVLWD 414
S + +++IS G D+ +++ WD
Sbjct: 107 SPNSQFLIS-GSADETFII-WD 126
>SB_24139| Best HMM Match : WD40 (HMM E-Value=8.29989e-42)
Length = 198
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/82 (24%), Positives = 41/82 (50%)
Frame = +1
Query: 169 LSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTF 348
L GH V++ ++SP GT + + + ++ +W+ + + E H V F
Sbjct: 52 LDGHNYHVNSCSVSPFGTLMATASTD-----STLMLWNLETGECLAVLEGHTGAVRVCRF 106
Query: 349 SSDERYMISLGGRDDGYVVLWD 414
S + +++IS G D+ +++ WD
Sbjct: 107 SPNSQFLIS-GSADETFII-WD 126
>SB_22072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 642
Score = 33.1 bits (72), Expect = 0.17
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 136 IQEWKTKKMYFLSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWD-FKKKAQI 303
++ W KM L GH V +A SP GT + SG +++ SA IWD K K +I
Sbjct: 167 LETWTVSKM--LRGHIEDVYDLAWSPDGTQLLSGSVDN-----SAIIWDAIKGKTEI 216
>SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1803
Score = 32.7 bits (71), Expect = 0.22
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Frame = +1
Query: 121 GNKVC-IQEWKTKK---MYFLSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFK 288
G++ C I+ W +K + L GH +V+ V +SP G + S + + ++W+
Sbjct: 1199 GSEDCTIRVWDSKTGALLAQLDGHAGAVTCVRVSPDGGVIASSSAD-----KTIRLWN-P 1252
Query: 289 KKAQIGSHELHKVRVEALTFSSDERYMISLGGRDDGYVVLWD 414
+ S E H+ RV +L FS + + ++S+ D + +WD
Sbjct: 1253 SDEFLRSLEGHEDRVTSLAFSKNGKRLVSVA--LDKKLKVWD 1292
>SB_4548| Best HMM Match : WD40 (HMM E-Value=6.7e-35)
Length = 844
Score = 32.7 bits (71), Expect = 0.22
Identities = 18/74 (24%), Positives = 37/74 (50%)
Frame = +1
Query: 94 DGEHVVYPMGNKVCIQEWKTKKMYFLSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAK 273
DG V+ + N+ +++++ GHT+ S + +SP GT + +G G + +
Sbjct: 448 DGNIAVWDLHNQTLVRQFQ--------GHTDGASCIDISPDGTKLWTG-----GLDNTVR 494
Query: 274 IWDFKKKAQIGSHE 315
WD ++ Q+ H+
Sbjct: 495 SWDLREGRQLQQHD 508
>SB_6763| Best HMM Match : WD40 (HMM E-Value=4.6e-24)
Length = 208
Score = 32.3 bits (70), Expect = 0.29
Identities = 25/103 (24%), Positives = 43/103 (41%)
Frame = +1
Query: 106 VVYPMGNKVCIQEWKTKKMYFLSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDF 285
+ P+ C + + ++GH ++ V SP G + S F S K+W+
Sbjct: 34 IAEPLVRMTCKTVQIAEPLVRMTGHQALINQVCFSPDGRLIASA-----AFDKSVKLWNG 88
Query: 286 KKKAQIGSHELHKVRVEALTFSSDERYMISLGGRDDGYVVLWD 414
+ I S H V + +S+D R + S G D + +WD
Sbjct: 89 ETGKFITSLRGHVNCVYQIAWSADCRLICS--GSADSTLKVWD 129
>SB_45927| Best HMM Match : WD40 (HMM E-Value=9e-18)
Length = 1764
Score = 31.5 bits (68), Expect = 0.51
Identities = 27/117 (23%), Positives = 48/117 (41%), Gaps = 2/117 (1%)
Frame = +1
Query: 70 IRGLKVHPDGEHVVYPMGNKVCIQEWKTKKMYFLSGHTNSVSTVALSPKGTYVGSGQINH 249
I + + P+ + +V+P KV I + + + + H N VS V + V SG
Sbjct: 1283 ISNMSLSPNDDLLVFPKREKVVILDLERDERREVLRHANYVSRVLAASNDVIVTSGG--- 1339
Query: 250 IGFKASAKIWDFKKKAQIGSHELHKVRVEALTFSSDERYMISLG--GRDDGYVVLWD 414
+IWD ++ + V D ++I++G G DD V +W+
Sbjct: 1340 ---DCVIRIWDLSREDVNHRVGRPETVVSVNPIPDDPYHVITVGRLGMDDHVVTVWN 1393
>SB_41443| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 482
Score = 31.1 bits (67), Expect = 0.67
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Frame = +1
Query: 169 LSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQ-IGSHEL-----HKVR 330
L HT V + SP G Y+ SG +++ IWD A I S+ L H+
Sbjct: 287 LDKHTQEVCGLKWSPDGKYLASGGNDNL-----LNIWDANISASGISSNSLFCLSQHQAA 341
Query: 331 VEALTFSSDERYMI-SLGGRDDGYVVLWD 414
V+AL + +R ++ S GG D + W+
Sbjct: 342 VKALDWCPFQRNVLASGGGTADRQIKFWN 370
>SB_17121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 596
Score = 30.7 bits (66), Expect = 0.89
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Frame = +1
Query: 64 SAIRGLKVHPDGEHVVYPMGNKVCIQEW--KTKK-MYFLSGHTNSVSTVALSPKGTYVGS 234
SA+ +HP + V+ G + W +TK ++ L+GHTN+VS+V V +
Sbjct: 362 SAVYDADIHPTID-VLLTCGRDATTRVWDIRTKACIHTLTGHTNTVSSVRAQAVDPQVIT 420
Query: 235 GQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTFS 351
G +H + ++WD + HK + A+T +
Sbjct: 421 G--SH---DCTIRLWDLAAGKSAVTLTNHKKSIRAVTLN 454
>SB_54574| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1050
Score = 30.7 bits (66), Expect = 0.89
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +1
Query: 268 AKIWDFKKKAQIGSHELHKVRVEALTFSSDERYMISLGGRDDGYVVLWDCV 420
AK+WD + S H V +++FS D MI G DDG V +WD V
Sbjct: 951 AKVWDASTGELLLSLGRHPDVVRSISFSPDN--MICTGC-DDGIVRIWDSV 998
>SB_36285| Best HMM Match : DUF1581 (HMM E-Value=5.7)
Length = 114
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 159 NVFSQWSYKQRVHRRTVS*GHLRWFWSDKPH 251
++F QW+Y H RTV RW +SD H
Sbjct: 59 DIFGQWTYSDSGHNRTVD-IFGRWTYSDSGH 88
>SB_42057| Best HMM Match : DUF1581 (HMM E-Value=2.5)
Length = 269
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 159 NVFSQWSYKQRVHRRTVS*GHLRWFWSDKPH 251
++F QW+Y H RTV RW +SD H
Sbjct: 214 DIFGQWTYSDSGHNRTVD-IFGRWTYSDSGH 243
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 TQSASGRRTCCISYGK*SLH-TGVEDEENVFSQWSYKQRVHRRTV 209
T S SG+RT I +G+ + +G ++F QW+Y H RTV
Sbjct: 153 TYSDSGQRTVDI-FGQLTYSDSGQIQTVDIFGQWTYSDSGHIRTV 196
>SB_29499| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 114
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 159 NVFSQWSYKQRVHRRTVS*GHLRWFWSDKPH 251
++F QW+Y H RTV RW +SD H
Sbjct: 59 DIFGQWTYSDSGHNRTVD-IFGRWTYSDSGH 88
>SB_5612| Best HMM Match : WD40 (HMM E-Value=4.4e-18)
Length = 736
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +1
Query: 169 LSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTF 348
L GH V+ ++ SP ++ + SA++WD + I ++ H RV ++ +
Sbjct: 18 LVGHCGRVTALSWSPHHP----DRLVTSSYDGSAQVWDVETNQPIANYRGHVGRVMSVCW 73
Query: 349 SSDERYMISLGGRDDGYVVLW 411
S + ++ GG +DG V W
Sbjct: 74 SYLDPDVVFSGG-EDGTVRPW 93
>SB_48711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 29.5 bits (63), Expect = 2.1
Identities = 27/131 (20%), Positives = 47/131 (35%)
Frame = +1
Query: 175 GHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTFSS 354
GH + +A++ G Y+ SG G +IWD I + + H+ + L F
Sbjct: 112 GHKEQILALAITTDGKYLASG-----GKDKLIRIWDPDTSKHIHTFKGHRDVISGLAFRR 166
Query: 355 DERYMISLGGRDDGYVVLWDCVXXXXXXXXXXXXXXXXXXMTLTALNARVNSFVTGGDSN 534
+ S D V +W+ +L+ A + G D
Sbjct: 167 GSHQLFS--ASHDKTVKIWNLDEMAYVETLFGHQDAVTGIDSLSRDRA---ATAGGRDRT 221
Query: 535 LRVWNIRAETK 567
LR+W + E++
Sbjct: 222 LRIWKVVEESQ 232
>SB_31407| Best HMM Match : TolA (HMM E-Value=2.5)
Length = 315
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -3
Query: 189 AVCMTTEKIHFLRLPLLYANFISHRIYNMFAVRMHFESPDRGTIK 55
A M + L LP Y +SHR ++ A +PDR TI+
Sbjct: 3 ATMMNRFRPSMLNLPFRYGVCLSHRAFSAAAEAAETSAPDRKTIR 47
>SB_43805| Best HMM Match : YscO (HMM E-Value=6)
Length = 243
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -3
Query: 189 AVCMTTEKIHFLRLPLLYANFISHRIYNMFAVRMHFESPDRGTIK 55
A M + L LP Y +SHR ++ A +PDR TI+
Sbjct: 3 ATMMNRFRPSMLNLPFRYGVCLSHRAFSAAAEAAETSAPDRKTIR 47
>SB_43298| Best HMM Match : WD40 (HMM E-Value=1.7e-30)
Length = 685
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 169 LSGHTNSVSTVALSPKGTYVGS 234
L+GHT+ V +A+SP G YV S
Sbjct: 624 LTGHTSRVLCMAMSPDGQYVAS 645
>SB_7988| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 68
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 169 LSGHTNSVSTVALSPKGTYVGS 234
L+GHT+ V +A+SP G YV S
Sbjct: 7 LTGHTSRVLCMAMSPDGQYVAS 28
>SB_34456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 28.7 bits (61), Expect = 3.6
Identities = 29/130 (22%), Positives = 59/130 (45%), Gaps = 4/130 (3%)
Frame = +1
Query: 28 NLETYAIIGFDGSAIRGLKVHPDGEHVVYPMGN-KVCIQEWKT-KKMYFLSGHTNSVSTV 201
N +++G ++ P+GE+V + +V + E + + + H ++V+ V
Sbjct: 77 NSVVMSLVGGHDDRVKSCAWSPNGEYVASSSADGRVTLWEPRLGTALSKIRAHEDAVTHV 136
Query: 202 ALSPKGTYVGSGQINHIGFKASAKIWD-FKKKAQIGSHELHKVRVEALTFS-SDERYMIS 375
P + + G +A ++W F+K+ Q+ S + HK E FS S + +++
Sbjct: 137 EFYPFVSTNSVPVLFTSGGRA-CRVWHPFRKRKQLESIKPHKAGDEVEAFSISPDGTLLA 195
Query: 376 LGGRDDGYVV 405
GG D V+
Sbjct: 196 TGGSDRNIVL 205
>SB_22215| Best HMM Match : Rib_hydrolayse (HMM E-Value=0.035)
Length = 186
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 510 RVDSGVQSGECHGVSCGKF 454
RVD SG CHG+ CG F
Sbjct: 112 RVDLDFGSGRCHGLPCGIF 130
>SB_9785| Best HMM Match : Cytochrom_B_C (HMM E-Value=7.5)
Length = 190
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +1
Query: 112 YPMGNKVCIQEWKTKKMYFLSGHTNS-VSTVALSPKGTYVGSGQINHIGFKASAKIWDFK 288
+ MGN C + W T +Y + + N + V KG + G G + F + + +
Sbjct: 118 HQMGNPACEKYWWTNVLYINNFYPNELIKEVQYGNKGLFAGVGGLLAASFVVTGVLIGYY 177
Query: 289 K 291
K
Sbjct: 178 K 178
>SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2332
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +1
Query: 157 KMYFLSGHTNSVSTVALSPKGTYVGSG 237
K+ F+ GH +V+T+A+ P G+Y+ SG
Sbjct: 218 KIIFI-GHLKAVNTLAIYPFGSYIMSG 243
>SB_3361| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +1
Query: 64 SAIRGLKVHPDGEHVVYPMGNKVCIQEW---KTKKMYFLSGHTNSVSTVALSPKGTYVGS 234
+ +R + DG+ ++ +K ++ W + K +Y L+ H N V SP G + S
Sbjct: 29 ATVRSVDFSGDGQSLLTASDDK-SLKVWTVHRQKFLYSLNAHMNWVRCAKFSPDGRLIVS 87
Query: 235 GQINHIGFKASAKIWDFKKK 294
G + + K+WD K
Sbjct: 88 GSDD-----KTIKLWDRTSK 102
>SB_2995| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 510 RVDSGVQSGECHGVSCG 460
RVD SG CHG+ CG
Sbjct: 12 RVDLNFGSGRCHGLPCG 28
>SB_30925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 209
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 159 NVFSQWSYKQRVHRRT 206
N +S W YK+RVH RT
Sbjct: 29 NGYSGWPYKKRVHHRT 44
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,161,268
Number of Sequences: 59808
Number of extensions: 386024
Number of successful extensions: 934
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1373676929
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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