Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_K23
(575 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 44 8e-05
AF101309-3|AAN60514.1| 760|Caenorhabditis elegans Hypothetical ... 43 2e-04
AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical ... 43 2e-04
AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical ... 43 2e-04
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical pr... 37 0.009
Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical pr... 34 0.063
AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein. 34 0.063
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 34 0.083
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 33 0.11
Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical p... 33 0.19
Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical pr... 33 0.19
AC006684-12|AAN60497.1| 528|Caenorhabditis elegans Hypothetical... 33 0.19
AC006684-11|AAF39968.1| 550|Caenorhabditis elegans Hypothetical... 33 0.19
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 32 0.34
Z83122-11|CAB05603.2| 648|Caenorhabditis elegans Hypothetical p... 31 0.44
Z81073-10|CAB03035.2| 648|Caenorhabditis elegans Hypothetical p... 31 0.44
Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical p... 31 0.59
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 31 0.59
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 31 0.59
U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical pr... 31 0.59
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr... 31 0.59
DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagella... 31 0.59
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 31 0.59
Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical pr... 31 0.78
X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein. 31 0.78
AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical ... 31 0.78
Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeri... 30 1.4
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 29 3.1
U41546-5|AAC48222.2| 1022|Caenorhabditis elegans Sodium:neurotra... 27 9.5
AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical ... 27 9.5
AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical ... 27 9.5
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 44.0 bits (99), Expect = 8e-05
Identities = 28/82 (34%), Positives = 39/82 (47%)
Frame = +1
Query: 169 LSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTF 348
L GHTN V +P GT + SG F + +IW + I S H+ V ++ F
Sbjct: 186 LKGHTNYVFCCCFNPSGTLIASG-----SFDETIRIWCARNGNTIFSIPGHEDPVSSVCF 240
Query: 349 SSDERYMISLGGRDDGYVVLWD 414
+ D Y+ S G DG V +WD
Sbjct: 241 NRDGAYLAS--GSYDGIVRIWD 260
Score = 42.3 bits (95), Expect = 2e-04
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Frame = +1
Query: 115 PMGNKVCIQEWKTKKMY--FLSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIW--D 282
PM N W T K+ + H S+S + SP G Y+GSG + S KIW D
Sbjct: 83 PMPNPSAANLWPTYKLVAEIPNAHKKSISGIKFSPDGRYMGSGSAD-----CSIKIWRMD 137
Query: 283 F-KKKAQIGSHELHKVRVEALTFSSDERYMISLGGRDDGYVVLWD 414
F +K +G H++ + ++SSD + ++S DD V ++D
Sbjct: 138 FVYEKTLMG----HRLGINEFSWSSDSKLIVSCS--DDKLVKVFD 176
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 160 MYFLSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWD 282
++ + GH + VS+V + G Y+ SG + I +IWD
Sbjct: 225 IFSIPGHEDPVSSVCFNRDGAYLASGSYDGI-----VRIWD 260
>AF101309-3|AAN60514.1| 760|Caenorhabditis elegans Hypothetical
protein H24G06.1c protein.
Length = 760
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/143 (17%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Frame = +1
Query: 13 DMDLKNLETYAIIGFDGSAIRGLKVHPDGEHVVYPMGNKVCIQEWKTKKMY---FLSGHT 183
+M ++ ++G G + G+ +H + ++ G+ + + + + +S
Sbjct: 13 EMKCESARLKNVVGRSGVTVNGIALHHASDTLLQVAGSSIIVSSTASHDRFEGHLISQTK 72
Query: 184 NSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQ------IGSHELHKVRVEALT 345
+ VA++ G Y +G+ H + + ++W + + S + H V + +
Sbjct: 73 QQFTCVAVTSCGKYAATGETGH---QPAVRLWQLRDAQGNFVGRLVRSMQSHTVSITIVR 129
Query: 346 FSSDERYMISLGGRDDGYVVLWD 414
F+ D+ +IS+G + D + WD
Sbjct: 130 FTPDDSTLISIGCQHDAQIFTWD 152
>AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical
protein H24G06.1b protein.
Length = 1601
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/143 (17%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Frame = +1
Query: 13 DMDLKNLETYAIIGFDGSAIRGLKVHPDGEHVVYPMGNKVCIQEWKTKKMY---FLSGHT 183
+M ++ ++G G + G+ +H + ++ G+ + + + + +S
Sbjct: 13 EMKCESARLKNVVGRSGVTVNGIALHHASDTLLQVAGSSIIVSSTASHDRFEGHLISQTK 72
Query: 184 NSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQ------IGSHELHKVRVEALT 345
+ VA++ G Y +G+ H + + ++W + + S + H V + +
Sbjct: 73 QQFTCVAVTSCGKYAATGETGH---QPAVRLWQLRDAQGNFVGRLVRSMQSHTVSITIVR 129
Query: 346 FSSDERYMISLGGRDDGYVVLWD 414
F+ D+ +IS+G + D + WD
Sbjct: 130 FTPDDSTLISIGCQHDAQIFTWD 152
>AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical
protein H24G06.1a protein.
Length = 1680
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/143 (17%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Frame = +1
Query: 13 DMDLKNLETYAIIGFDGSAIRGLKVHPDGEHVVYPMGNKVCIQEWKTKKMY---FLSGHT 183
+M ++ ++G G + G+ +H + ++ G+ + + + + +S
Sbjct: 13 EMKCESARLKNVVGRSGVTVNGIALHHASDTLLQVAGSSIIVSSTASHDRFEGHLISQTK 72
Query: 184 NSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQ------IGSHELHKVRVEALT 345
+ VA++ G Y +G+ H + + ++W + + S + H V + +
Sbjct: 73 QQFTCVAVTSCGKYAATGETGH---QPAVRLWQLRDAQGNFVGRLVRSMQSHTVSITIVR 129
Query: 346 FSSDERYMISLGGRDDGYVVLWD 414
F+ D+ +IS+G + D + WD
Sbjct: 130 FTPDDSTLISIGCQHDAQIFTWD 152
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 42.3 bits (95), Expect = 2e-04
Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 1/135 (0%)
Frame = +1
Query: 154 KKMYFLSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRV 333
K M L GHT S+S+ SP G Y+G+ + + KIW+ + HK+ V
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCGKYLGTSSAD-----KTVKIWNMDHMICERTLTGHKLGV 132
Query: 334 EALTFSSDERYMISLGGRDDGYVVLWDCVXXXXXXXXXXXXXXXXXXMTLTALNARVNSF 513
+ +SSD R ++S DD + +++ V + N + +
Sbjct: 133 NDIAWSSDSRCVVS--ASDDKTLKIFEIV----TSRMTKTLKGHNNYVFCCNFNPQSSLV 186
Query: 514 VTGG-DSNLRVWNIR 555
V+G D ++R+W+++
Sbjct: 187 VSGSFDESVRIWDVK 201
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 38.7 bits (86), Expect = 0.003
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Frame = +1
Query: 70 IRGLKVHPDGEHVVYPMGNK-VCIQEWKTK---KMYFLSGHTNSVSTVALSPKGTYVGSG 237
+R L VHP +V+ + V + +W K K F GHT+ V +A++PK +
Sbjct: 102 LRSLVVHPTLPYVISSSDDMLVKMWDWDNKWAMKQSF-EGHTHYVMQIAINPK----DNN 156
Query: 238 QINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTF--SSDERYMISLGGRDDGYVVLW 411
+ K+W F + E H+ V + + ++ Y+IS G DD V +W
Sbjct: 157 TFATASLDKTVKVWQFGSNVPNFTLEGHEKGVNCVDYYHGGEKPYIIS--GADDHLVKIW 214
Query: 412 D 414
D
Sbjct: 215 D 215
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/84 (26%), Positives = 43/84 (51%)
Frame = +1
Query: 169 LSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTF 348
+SGHT SVS + S G Y+G+G + K+W+ + + H++ + ++
Sbjct: 209 ISGHTKSVSVIKFSYCGKYLGTGSAD-----KQIKVWNTVDMTYLQTLASHQLGINDFSW 263
Query: 349 SSDERYMISLGGRDDGYVVLWDCV 420
SS+ +++ S DD V ++D +
Sbjct: 264 SSNSQFIAS--ASDDTTVKIFDVI 285
Score = 37.9 bits (84), Expect = 0.005
Identities = 20/82 (24%), Positives = 39/82 (47%)
Frame = +1
Query: 169 LSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTF 348
+ GHTN V + +P+ + + S GF + ++WDFK + H + ++++
Sbjct: 293 MRGHTNYVFCCSFNPQSSLIASA-----GFDETVRVWDFKTGLCVKCIPAHSDPITSISY 347
Query: 349 SSDERYMISLGGRDDGYVVLWD 414
+ D M + DG + +WD
Sbjct: 348 NHDGNTMAT--SSYDGCIRVWD 367
>Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical
protein C36B1.5 protein.
Length = 496
Score = 37.1 bits (82), Expect = 0.009
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Frame = +1
Query: 88 HPDGEHVVYPMGNKVC-IQEWKTKK-MYFLSGHTNSVSTVALSPKGTYVGSGQINHIGFK 261
HP+G H+ + + + TKK + + GH+ SV+ VA P G+ +G G
Sbjct: 305 HPNGHHLATACFDSTWRMYDLTTKKELLYQEGHSKSVADVAFHPDGSVALTG-----GHD 359
Query: 262 ASAKIWDFKKKAQIGSHELHKVRVEALTFSSDERYMISLGGRDDGYVVLWD 414
++WD + I + H + ++ + + MI+ G D + +WD
Sbjct: 360 CYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEMIT--GSSDNSMKVWD 408
>Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical
protein T03F6.5 protein.
Length = 404
Score = 34.3 bits (75), Expect = 0.063
Identities = 24/119 (20%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
Frame = +1
Query: 70 IRGLKVHPDGEHVVYPMGNKVCIQEWKTKK---MYFLSGHTNSVSTVALSPKGTYVGSGQ 240
+ G + + H+++ I+ W ++ L H N V +A PKG Y+ S
Sbjct: 292 VTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLIS-- 349
Query: 241 INHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTFSSDERYMISLGGRDDGYVVLWDC 417
+ + ++W+ + + + E H+ V + F ++I+ G D +W+C
Sbjct: 350 ---VADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVIT--GSVDMSCKVWEC 403
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
Frame = +1
Query: 67 AIRGLKVHPDGEHVVYPMGNKVCIQEWKTKKMY----FLSGHTNSVSTVALSPKGTYVGS 234
A+ + + G+ +V + + I+ W + Y L GH ++VS+V P G +V S
Sbjct: 150 AVNDIAIDAAGKQLV-SCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLS 208
Query: 235 GQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTFSSD 357
+H + K WD + + H V + S+D
Sbjct: 209 ASRDH-----TIKQWDISTGYCVYTFRGHNDWVRMIRISND 244
>AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein.
Length = 404
Score = 34.3 bits (75), Expect = 0.063
Identities = 24/119 (20%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
Frame = +1
Query: 70 IRGLKVHPDGEHVVYPMGNKVCIQEWKTKK---MYFLSGHTNSVSTVALSPKGTYVGSGQ 240
+ G + + H+++ I+ W ++ L H N V +A PKG Y+ S
Sbjct: 292 VTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLIS-- 349
Query: 241 INHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTFSSDERYMISLGGRDDGYVVLWDC 417
+ + ++W+ + + + E H+ V + F ++I+ G D +W+C
Sbjct: 350 ---VADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVIT--GSVDMSCKVWEC 403
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
Frame = +1
Query: 67 AIRGLKVHPDGEHVVYPMGNKVCIQEWKTKKMY----FLSGHTNSVSTVALSPKGTYVGS 234
A+ + + G+ +V + + I+ W + Y L GH ++VS+V P G +V S
Sbjct: 150 AVNDIAIDAAGKQLV-SCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLS 208
Query: 235 GQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTFSSD 357
+H + K WD + + H V + S+D
Sbjct: 209 ASRDH-----TIKQWDISTGYCVYTFRGHNDWVRMIRISND 244
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 33.9 bits (74), Expect = 0.083
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +1
Query: 142 EWKTKKMYF-LSGHTNSVSTVALSPKGTYVGSG 237
E KTK +Y+ L GH + V TV SP+GT V SG
Sbjct: 430 ELKTKSLYYDLPGHGDEVFTVDWSPEGTKVVSG 462
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 33.5 bits (73), Expect = 0.11
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +1
Query: 175 GHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTFSS 354
GHT V+TV +SP G+ SG G A +WD + + + + V + A++FS
Sbjct: 196 GHTGYVNTVTVSPDGSLCASG-----GKDGQAMLWDLNEGKHLYTLPGNDV-INAMSFSP 249
Query: 355 DERYMISLGGRDDGYVVLWD 414
+ ++ + G + +WD
Sbjct: 250 NRYWLCAAVGSS---IKIWD 266
>Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 32.7 bits (71), Expect = 0.19
Identities = 32/166 (19%), Positives = 65/166 (39%), Gaps = 3/166 (1%)
Frame = +1
Query: 64 SAIRGLKVHPDGEHVVYPMGNKVCIQEWK---TKKMYFLSGHTNSVSTVALSPKGTYVGS 234
S++R +KV P ++ G ++ W K + GH ++V +++ P + +
Sbjct: 227 SSVRAVKVSPR-HPFLFSGGEDKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSLDVLVT 285
Query: 235 GQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTFSSDERYMISLGGRDDGYVVLWD 414
++A++WD + KAQ+ H V + S + +I+ D V LWD
Sbjct: 286 -----CARDSTARVWDMRTKAQVHCFAGHTNTVADVVCQSVDPQVIT--ASHDATVRLWD 338
Query: 415 CVXXXXXXXXXXXXXXXXXXMTLTALNARVNSFVTGGDSNLRVWNI 552
+ ++ R+N F + N++ W +
Sbjct: 339 ----LAAGRSMCTLTHHKKSVRALTIHPRLNMFASASPDNIKQWKL 380
Score = 31.1 bits (67), Expect = 0.59
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +1
Query: 169 LSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALT 345
L+GH +SV V +SP+ ++ SG G K WD + I + H V+AL+
Sbjct: 222 LTGHISSVRAVKVSPRHPFLFSG-----GEDKQVKCWDLEYNKVIRHYHGHLSAVQALS 275
>Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 32.7 bits (71), Expect = 0.19
Identities = 32/166 (19%), Positives = 65/166 (39%), Gaps = 3/166 (1%)
Frame = +1
Query: 64 SAIRGLKVHPDGEHVVYPMGNKVCIQEWK---TKKMYFLSGHTNSVSTVALSPKGTYVGS 234
S++R +KV P ++ G ++ W K + GH ++V +++ P + +
Sbjct: 227 SSVRAVKVSPR-HPFLFSGGEDKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSLDVLVT 285
Query: 235 GQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTFSSDERYMISLGGRDDGYVVLWD 414
++A++WD + KAQ+ H V + S + +I+ D V LWD
Sbjct: 286 -----CARDSTARVWDMRTKAQVHCFAGHTNTVADVVCQSVDPQVIT--ASHDATVRLWD 338
Query: 415 CVXXXXXXXXXXXXXXXXXXMTLTALNARVNSFVTGGDSNLRVWNI 552
+ ++ R+N F + N++ W +
Sbjct: 339 ----LAAGRSMCTLTHHKKSVRALTIHPRLNMFASASPDNIKQWKL 380
Score = 31.1 bits (67), Expect = 0.59
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +1
Query: 169 LSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALT 345
L+GH +SV V +SP+ ++ SG G K WD + I + H V+AL+
Sbjct: 222 LTGHISSVRAVKVSPRHPFLFSG-----GEDKQVKCWDLEYNKVIRHYHGHLSAVQALS 275
>AC006684-12|AAN60497.1| 528|Caenorhabditis elegans Hypothetical
protein T02H6.1b protein.
Length = 528
Score = 32.7 bits (71), Expect = 0.19
Identities = 29/137 (21%), Positives = 52/137 (37%), Gaps = 5/137 (3%)
Frame = +1
Query: 172 SGHTNSVSTVALSPKGTYVGSGQINHI-----GFKASAKIWDFKKKAQIGSHELHKVRVE 336
+ H + TVA+SP ++ SG + + K +IW+F I H+ +
Sbjct: 193 NAHYGVIFTVAVSPDQKFIASGGFDQVVKAPKNMKILFQIWNFDSLEHIKDLSGHRGPIF 252
Query: 337 ALTFSSDERYMISLGGRDDGYVVLWDCVXXXXXXXXXXXXXXXXXXMTLTALNARVNSFV 516
+LTF + S D V +WD + L+ + + V
Sbjct: 253 SLTFQLKTNNLYS--ASQDRSVKMWD---IDQLGLVDTMYGHQDGVQQIGVLSKQRVATV 307
Query: 517 TGGDSNLRVWNIRAETK 567
G D + R+W + E++
Sbjct: 308 GGRDRSARLWKVEDESQ 324
>AC006684-11|AAF39968.1| 550|Caenorhabditis elegans Hypothetical
protein T02H6.1a protein.
Length = 550
Score = 32.7 bits (71), Expect = 0.19
Identities = 29/137 (21%), Positives = 52/137 (37%), Gaps = 5/137 (3%)
Frame = +1
Query: 172 SGHTNSVSTVALSPKGTYVGSGQINHI-----GFKASAKIWDFKKKAQIGSHELHKVRVE 336
+ H + TVA+SP ++ SG + + K +IW+F I H+ +
Sbjct: 193 NAHYGVIFTVAVSPDQKFIASGGFDQVVKAPKNMKILFQIWNFDSLEHIKDLSGHRGPIF 252
Query: 337 ALTFSSDERYMISLGGRDDGYVVLWDCVXXXXXXXXXXXXXXXXXXMTLTALNARVNSFV 516
+LTF + S D V +WD + L+ + + V
Sbjct: 253 SLTFQLKTNNLYS--ASQDRSVKMWD---IDQLGLVDTMYGHQDGVQQIGVLSKQRVATV 307
Query: 517 TGGDSNLRVWNIRAETK 567
G D + R+W + E++
Sbjct: 308 GGRDRSARLWKVEDESQ 324
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 31.9 bits (69), Expect = 0.34
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = +1
Query: 94 DGEHVVYPMGNKVCIQEWKTKKMYFLSGHTN-SVSTVALSPKGTYV----GSGQINHIGF 258
DG V+ P+GNK+ I + + L N ++ +++SP G ++ G ++ +
Sbjct: 25 DGYSVISPIGNKLSIFDLRNNTSKTLDIDCNYNIKRLSISPSGYHLLASDERGVVHFVHL 84
Query: 259 KASAKIWDFKKKAQIGS 309
+ KI+ F+ IGS
Sbjct: 85 LSEFKIYTFRSNKPIGS 101
>Z83122-11|CAB05603.2| 648|Caenorhabditis elegans Hypothetical
protein F30F8.8 protein.
Length = 648
Score = 31.5 bits (68), Expect = 0.44
Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
Frame = +1
Query: 145 WKTKKMYFL---SGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHE 315
W T +M+ L + V + P Y+ G + ++WD ++
Sbjct: 462 WSTDRMHPLRIFADPYGDVGCIDYHPNCNYIAGGSDDRY-----VRVWDVCSGTRVRIFS 516
Query: 316 LHKVRVEALTFSSDERYMISLGGRDDGYVVLWD 414
HK + A+ FS RY++SL G +++WD
Sbjct: 517 GHKASIIAVKFSPCGRYIVSLDA--IGNLMIWD 547
>Z81073-10|CAB03035.2| 648|Caenorhabditis elegans Hypothetical
protein F30F8.8 protein.
Length = 648
Score = 31.5 bits (68), Expect = 0.44
Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
Frame = +1
Query: 145 WKTKKMYFL---SGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHE 315
W T +M+ L + V + P Y+ G + ++WD ++
Sbjct: 462 WSTDRMHPLRIFADPYGDVGCIDYHPNCNYIAGGSDDRY-----VRVWDVCSGTRVRIFS 516
Query: 316 LHKVRVEALTFSSDERYMISLGGRDDGYVVLWD 414
HK + A+ FS RY++SL G +++WD
Sbjct: 517 GHKASIIAVKFSPCGRYIVSLDA--IGNLMIWD 547
>Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical
protein F23B2.4 protein.
Length = 1192
Score = 31.1 bits (67), Expect = 0.59
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +1
Query: 61 GSAIRGLKVHPDGEHVVYPMGNKVCIQEWKTK-KMYFLSGHTNSVSTVALSPKGTYVGSG 237
G I L PDG ++ NKV + + +M L GH + V TVA S G SG
Sbjct: 19 GVCIYDLAFKPDGSELLLAADNKVYLFDVNEGGQMQTLKGHKDLVYTVAWSHNGELFASG 78
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 31.1 bits (67), Expect = 0.59
Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Frame = +1
Query: 52 GFDGSAIRGLKVHPDGEHVVYPMGNKVCIQEW---KTKKMYFLSGHTNSVSTVALSPKGT 222
G + I +++H D V+ + ++ W K + MY L GHT V T +S G
Sbjct: 251 GHEDHVITCMQIHDD---VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGR 307
Query: 223 YVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTFSSDERYMISLGGRDDGYV 402
Y+ SG + + K+W + + + + H V + + I + G D +
Sbjct: 308 YIVSGSTDR-----TVKVWSTVDGSLLHTLQGHTSTVRCMAMAGS----ILVTGSRDTTL 358
Query: 403 VLWD 414
+WD
Sbjct: 359 RVWD 362
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 31.1 bits (67), Expect = 0.59
Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Frame = +1
Query: 52 GFDGSAIRGLKVHPDGEHVVYPMGNKVCIQEW---KTKKMYFLSGHTNSVSTVALSPKGT 222
G + I +++H D V+ + ++ W K + MY L GHT V T +S G
Sbjct: 253 GHEDHVITCMQIHDD---VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGR 309
Query: 223 YVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTFSSDERYMISLGGRDDGYV 402
Y+ SG + + K+W + + + + H V + + I + G D +
Sbjct: 310 YIVSGSTDR-----TVKVWSTVDGSLLHTLQGHTSTVRCMAMAGS----ILVTGSRDTTL 360
Query: 403 VLWD 414
+WD
Sbjct: 361 RVWD 364
>U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical
protein K10D2.1b protein.
Length = 669
Score = 31.1 bits (67), Expect = 0.59
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 154 KKMYFLSGHTNSVSTVALSPKGTYVGSGQINH 249
K+ L GH+ V TV SP G Y+ SG I++
Sbjct: 124 KECCVLRGHSMEVLTVEWSPNGKYLASGSIDY 155
>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
protein K10D2.1a protein.
Length = 1223
Score = 31.1 bits (67), Expect = 0.59
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 154 KKMYFLSGHTNSVSTVALSPKGTYVGSGQINH 249
K+ L GH+ V TV SP G Y+ SG I++
Sbjct: 412 KECCVLRGHSMEVLTVEWSPNGKYLASGSIDY 443
>DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagellar
transport protein protein.
Length = 1192
Score = 31.1 bits (67), Expect = 0.59
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +1
Query: 61 GSAIRGLKVHPDGEHVVYPMGNKVCIQEWKTK-KMYFLSGHTNSVSTVALSPKGTYVGSG 237
G I L PDG ++ NKV + + +M L GH + V TVA S G SG
Sbjct: 19 GVCIYDLAFKPDGSELLLAADNKVYLFDVNEGGQMQTLKGHKDLVYTVAWSHNGELFASG 78
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 31.1 bits (67), Expect = 0.59
Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Frame = +1
Query: 52 GFDGSAIRGLKVHPDGEHVVYPMGNKVCIQEW---KTKKMYFLSGHTNSVSTVALSPKGT 222
G + I +++H D V+ + ++ W K + MY L GHT V T +S G
Sbjct: 253 GHEDHVITCMQIHDD---VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGR 309
Query: 223 YVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTFSSDERYMISLGGRDDGYV 402
Y+ SG + + K+W + + + + H V + + I + G D +
Sbjct: 310 YIVSGSTDR-----TVKVWSTVDGSLLHTLQGHTSTVRCMAMAGS----ILVTGSRDTTL 360
Query: 403 VLWD 414
+WD
Sbjct: 361 RVWD 364
>Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical
protein K08F9.2 protein.
Length = 600
Score = 30.7 bits (66), Expect = 0.78
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Frame = +1
Query: 178 HTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKKKAQ-----IGSHELHKVRVEAL 342
HT+ V TVA SP + +G I+ S IWD KK + G+H + V V
Sbjct: 524 HTSKVLTVAWSPDNQRLATGSID-----TSVIIWDMKKPGEHPVIIKGAHPMSSVNVVRW 578
Query: 343 TFSSDERYMISLGGRDDGYVVLWD 414
DE ++S G D + W+
Sbjct: 579 L---DETTVVSAG--QDSNIKFWN 597
>X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein.
Length = 340
Score = 30.7 bits (66), Expect = 0.78
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Frame = +1
Query: 94 DGEHVVYPMGNKVC-IQEWKT-KKMYFLSGHTNSVSTVALSPKGTYVGSGQINHIGFKAS 267
D +V G+ C + + +T ++ +GHT V +++LSP SG + AS
Sbjct: 153 DDNQIVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLSLSPDFRTFISGACD-----AS 207
Query: 268 AKIWDFKKKAQIGSHELHKVRVEALT-FSSDERYMISLGGRDDGYVVLWD 414
AK+WD + + H+ + A+ F S R+ G DD L+D
Sbjct: 208 AKLWDIRDGMCKQTFPGHESDINAVAFFPSGNRFAT---GSDDATCRLFD 254
>AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical
protein Y48B6A.1 protein.
Length = 674
Score = 30.7 bits (66), Expect = 0.78
Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 73 RGLKVHPDGEHVVYPMGNKVCIQEWKTKKMYFLSGHTNSVSTVALSP-KGTYVGSGQINH 249
R +++H D ++ + N ++ + T +++ GHT V + + P +G + SG
Sbjct: 308 RKMRIHADPTDLLPDLPNPNDLRPFPTTLAFYMRGHTGQVRAITVEPERGELLASG---- 363
Query: 250 IGFKASAKIW 279
G + +IW
Sbjct: 364 -GEDGTVRIW 372
>Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical
protein T01G1.3 protein.
Length = 1083
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/69 (28%), Positives = 29/69 (42%)
Frame = +1
Query: 211 PKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTFSSDERYMISLGGRD 390
P G G + + F + K + + S H V + S D R+M S GG
Sbjct: 84 PNGIIAGGTEDGTVVFFDADKFIKNQSLEVLLSRRDHHGHVLTIDVSRDGRWMASGGG-- 141
Query: 391 DGYVVLWDC 417
G ++LWDC
Sbjct: 142 SGQILLWDC 150
>Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical
protein T01G1.3 protein.
Length = 1083
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/69 (28%), Positives = 29/69 (42%)
Frame = +1
Query: 211 PKGTYVGSGQINHIGFKASAKIWDFKKKAQIGSHELHKVRVEALTFSSDERYMISLGGRD 390
P G G + + F + K + + S H V + S D R+M S GG
Sbjct: 84 PNGIIAGGTEDGTVVFFDADKFIKNQSLEVLLSRRDHHGHVLTIDVSRDGRWMASGGG-- 141
Query: 391 DGYVVLWDC 417
G ++LWDC
Sbjct: 142 SGQILLWDC 150
>Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical
protein F13D12.7 protein.
Length = 340
Score = 29.9 bits (64), Expect = 1.4
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Frame = +1
Query: 94 DGEHVVYPMGNKVC-IQEWKT-KKMYFLSGHTNSVSTVALSPKGTYVGSGQINHIGFKAS 267
D +V G+ C + + +T ++ +GHT V +++LSP SG + AS
Sbjct: 153 DDNQIVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLSLSPDFRTFISGACD-----AS 207
Query: 268 AKIWDFKKKAQIGSHELHKVRVEALTFSSDERYMISLGGRDDGYVVLWD 414
AK+WD + + H+ + A+ F + G DD L+D
Sbjct: 208 AKLWDIRDGMCKQTFPGHESDINAVAFFPSGNAFAT--GSDDATCRLFD 254
>AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeric G
protein beta subunit1 protein.
Length = 340
Score = 29.9 bits (64), Expect = 1.4
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Frame = +1
Query: 94 DGEHVVYPMGNKVC-IQEWKT-KKMYFLSGHTNSVSTVALSPKGTYVGSGQINHIGFKAS 267
D +V G+ C + + +T ++ +GHT V +++LSP SG + AS
Sbjct: 153 DDNQIVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLSLSPDFRTFISGACD-----AS 207
Query: 268 AKIWDFKKKAQIGSHELHKVRVEALTFSSDERYMISLGGRDDGYVVLWD 414
AK+WD + + H+ + A+ F + G DD L+D
Sbjct: 208 AKLWDIRDGMCKQTFPGHESDINAVAFFPSGNAFAT--GSDDATCRLFD 254
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/92 (21%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Frame = +1
Query: 163 YFLSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWDFKK----KAQIGSHELHKVR 330
Y L+GH ++++ ++LSP G ++ S ++ + + WD + + +G H
Sbjct: 201 YTLTGHRDTITGISLSPSGKFIISNSMD-----CTVRQWDIRPFVPGQRSVGVFAGHNHN 255
Query: 331 VE----ALTFSSDERYMISLGGRDDGYVVLWD 414
E ++S ER++ + G D ++ +W+
Sbjct: 256 FEKNLLKCSWSPCERFITA--GSSDRFLYVWE 285
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +1
Query: 169 LSGHTNSVSTVALSPKGTYVGSGQINHIGFKASAKIWD-FKKKAQIGSHELHKVRVEALT 345
L GH + T A SP GT + + G+ W+ + + + + H V L
Sbjct: 34 LLGHEGEIYTGAFSPDGTCLATS-----GYDQKIFFWNVYGECENFSTIKGHSGAVMDLK 88
Query: 346 FSSDERYMISLGGRDDGYVVLWD 414
F++D ++S G D V +WD
Sbjct: 89 FTTDSSSLVSCG--TDKSVRVWD 109
>U41546-5|AAC48222.2| 1022|Caenorhabditis elegans
Sodium:neurotransmitter symporterfamily protein 12
protein.
Length = 1022
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2
Query: 370 SYSARPMRTLELRPAPCVTHGCRSEPSS*SPKFSRTP 260
S S P+ T L P P + H CRSEP + K S +P
Sbjct: 891 SASDPPVPTSPLPPPPKLQH-CRSEPPMMNSKESHSP 926
>AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.9 protein.
Length = 244
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = -3
Query: 348 ER*SFDPHLV*LMAADLSLLLKVPNFRGRLEANVVYLTRTNVGALRRQCDGGHAVCMT 175
ER +FD L L + L + + R+E + YL+ N + R GH +C T
Sbjct: 147 ERSAFDQELTRLKTSRLEN--EKSSLASRVECTICYLSYDNEARVPRVMKCGHTICHT 202
>AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.8 protein.
Length = 244
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = -3
Query: 348 ER*SFDPHLV*LMAADLSLLLKVPNFRGRLEANVVYLTRTNVGALRRQCDGGHAVCMT 175
ER +FD L L + L + + R+E + YL+ N + R GH +C T
Sbjct: 147 ERSAFDQELTRLKTSRLEN--EKSSLASRVECTICYLSYDNEARVPRVMKCGHTICHT 202
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,271,961
Number of Sequences: 27780
Number of extensions: 279861
Number of successful extensions: 743
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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