Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_K23
         (575 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   2.2  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   2.2  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    23   2.9  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    23   2.9  
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    21   6.6  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    21   6.6  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = +1

Query: 148 KTKKMYFLSGHTNSVSTV 201
           K +K+Y  SGH +++++V
Sbjct: 247 KKRKIYLFSGHESNIASV 264


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = +1

Query: 148 KTKKMYFLSGHTNSVSTV 201
           K +K+Y  SGH +++++V
Sbjct: 262 KKRKIYLFSGHESNIASV 279


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -2

Query: 370 SYSARPMRTLELRPAPCVTHGCRSEPSS*SPKFSR 266
           S S   + ++ELR  PC+    +SE +  S + SR
Sbjct: 612 SASEESVHSMELRTLPCLLPRPKSENNFASQELSR 646


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -2

Query: 370 SYSARPMRTLELRPAPCVTHGCRSEPSS*SPKFSR 266
           S S   + ++ELR  PC+    +SE +  S + SR
Sbjct: 580 SASEESVHSMELRTLPCLLPRPKSENNFASQELSR 614


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 146 GRRRKCIFSVVIQTACP 196
           GRR K +  +V++ ACP
Sbjct: 65  GRRLKSLAPLVLRGACP 81


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 146 GRRRKCIFSVVIQTACP 196
           GRR K +  +V++ ACP
Sbjct: 65  GRRLKSLAPLVLRGACP 81


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,605
Number of Sequences: 438
Number of extensions: 3653
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)