Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_K22
         (570 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MGF9 Cluster: Putative uncharacterized protein; n=1; ...    75   1e-12
UniRef50_Q9KQW8 Cluster: Rec2-related protein; n=18; Vibrio chol...    36   0.88 
UniRef50_Q5BBK2 Cluster: Putative uncharacterized protein; n=1; ...    35   1.5  
UniRef50_Q9M291 Cluster: Protein transport protein Sec24-like CE...    34   2.7  
UniRef50_Q25467 Cluster: Cuticule collagen; n=3; Tylenchoidea|Re...    33   4.7  
UniRef50_A2ECL1 Cluster: Putative uncharacterized protein; n=1; ...    33   6.2  

>UniRef50_Q5MGF9 Cluster: Putative uncharacterized protein; n=1;
           Lonomia obliqua|Rep: Putative uncharacterized protein -
           Lonomia obliqua (Moth)
          Length = 88

 Score = 74.9 bits (176), Expect = 1e-12
 Identities = 38/67 (56%), Positives = 44/67 (65%), Gaps = 7/67 (10%)
 Frame = +3

Query: 51  VHVVDNSG-------VVIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDN 209
           V VVDNS         VI+NPDPFFSQPSNGP+G Y+     PAFVD ++   P K YD+
Sbjct: 22  VQVVDNSNQVPSDGQFVISNPDPFFSQPSNGPNGGYQQPDISPAFVDNSNQYRPQKHYDH 81

Query: 210 PLARGGK 230
           P ARGGK
Sbjct: 82  PGARGGK 88


>UniRef50_Q9KQW8 Cluster: Rec2-related protein; n=18; Vibrio
          cholerae|Rep: Rec2-related protein - Vibrio cholerae
          Length = 752

 Score = 35.5 bits (78), Expect = 0.88
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +1

Query: 16 SSPYWPWLPQTEFTWWTIVVLLL 84
          S+PYWPW+P   + W  ++V++L
Sbjct: 24 SAPYWPWMPSWGWAWLCLIVMVL 46


>UniRef50_Q5BBK2 Cluster: Putative uncharacterized protein; n=1;
           Emericella nidulans|Rep: Putative uncharacterized
           protein - Emericella nidulans (Aspergillus nidulans)
          Length = 1458

 Score = 34.7 bits (76), Expect = 1.5
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = +3

Query: 93  DPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYP 191
           D  F QPSNG  GN E I   P F++ N P+ P
Sbjct: 527 DQNFDQPSNG--GNMEDIQESPGFIESNKPDVP 557


>UniRef50_Q9M291 Cluster: Protein transport protein Sec24-like CEF;
           n=4; Arabidopsis thaliana|Rep: Protein transport protein
           Sec24-like CEF - Arabidopsis thaliana (Mouse-ear cress)
          Length = 1097

 Score = 33.9 bits (74), Expect = 2.7
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +3

Query: 69  SGVVIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDNPLARGG 227
           SG ++A P P+   P+ GP     P+S+ PA       N+P   Y  P   GG
Sbjct: 243 SGPMMAPPPPYGQPPNAGPFTGNSPLSSPPAHSIPAPTNFPGVPYGRPPMPGG 295


>UniRef50_Q25467 Cluster: Cuticule collagen; n=3; Tylenchoidea|Rep:
           Cuticule collagen - Meloidogyne incognita (Southern
           root-knot nematode)
          Length = 305

 Score = 33.1 bits (72), Expect = 4.7
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -1

Query: 93  PGSQ*QHHYCPPRELCLRQPWPIRRRRKTRK 1
           PG   Q+  CPPR LC RQ   +R++ K +K
Sbjct: 272 PGQDAQYCPCPPRSLCSRQRNALRKQMKRKK 302


>UniRef50_A2ECL1 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 713

 Score = 32.7 bits (71), Expect = 6.2
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 87  NPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 194
           NP   +   + GP+  + P ++GP ++  N PNYPP
Sbjct: 309 NPQNQYPNNNRGPNPIFNP-NSGPGYMQRNPPNYPP 343


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 438,168,414
Number of Sequences: 1657284
Number of extensions: 7652595
Number of successful extensions: 19706
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19692
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38738010471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)