Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_K21
         (384 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    28   0.037
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   4.2  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    20   7.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    20   7.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   7.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   7.4  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    20   7.4  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           20   7.4  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    20   9.7  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    20   9.7  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    20   9.7  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    20   9.7  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    20   9.7  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    20   9.7  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 27.9 bits (59), Expect = 0.037
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = +2

Query: 140 CMKVHCSAGRVCEINEHGEAICNCIQECPYETDSWGKVCTNFNETWSSDCE 292
           C    C  G VC I++ G  IC    +CP  T+         NE  S+ C+
Sbjct: 380 CDSNPCQNGGVCRISDGGGYIC----DCPSGTNGTNCEIDTINECDSNPCK 426



 Score = 20.6 bits (41), Expect = 5.6
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = -3

Query: 355 CYCAPRH 335
           CYC P+H
Sbjct: 441 CYCPPKH 447


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = +2

Query: 8   EHLENGMAESLDERRFQEAERARVSEILNESRDAPDNEINL 130
           E L NG+   L  +R + ++ A  + +   +  + D  IN+
Sbjct: 850 EILANGVLSGLSIKRTERSDSALFTCVATNAFGSDDTSINM 890


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 242 KSRFRMDTPECSCR 201
           KS FR+D  +CS R
Sbjct: 7   KSVFRLDQDQCSHR 20


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 242 KSRFRMDTPECSCR 201
           KS FR+D  +CS R
Sbjct: 321 KSVFRLDQDQCSHR 334


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 242 KSRFRMDTPECSCR 201
           KS FR+D  +CS R
Sbjct: 554 KSVFRLDQDQCSHR 567


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 242 KSRFRMDTPECSCR 201
           KS FR+D  +CS R
Sbjct: 554 KSVFRLDQDQCSHR 567


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 2   ESEHLENGMAESLDERRF 55
           E  HL++   ESL+ R F
Sbjct: 119 EQIHLDDNRIESLERRAF 136


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 6/18 (33%), Positives = 9/18 (50%)
 Frame = -2

Query: 110 EHRVTHSGSRRHELSQPP 57
           EH  TH+    H + + P
Sbjct: 36  EHNYTHNNEMYHSVKEEP 53


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -2

Query: 290 RSPMTRSR*SLCTPCPKSRFRMDTPECS 207
           ++P   SR    T C K+ +  D  +CS
Sbjct: 408 KAPAPPSRDLTTTLCTKAGYVRDPDDCS 435


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 74  ELSQPPGIVSRPGSPP 27
           E  +P G++S   SPP
Sbjct: 120 ESGKPSGVISTNTSPP 135


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 38  LDERRFQEAERARVSEILNE 97
           LD RR +     + SEILNE
Sbjct: 228 LDARRKRRNFSKQASEILNE 247


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 241 RVGFVWTLLNAVADSFP 191
           R+ + WT +NA A+  P
Sbjct: 56  RITYSWTEINAFANVSP 72


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 241 RVGFVWTLLNAVADSFP 191
           R+ + WT +NA A+  P
Sbjct: 56  RITYSWTEINAFANVSP 72


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 13  PRERHGGEPGRETIPGG*E 69
           PR  +G  PG ET+  G E
Sbjct: 99  PRLAYGKRPGVETLSVGSE 117


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,558
Number of Sequences: 336
Number of extensions: 1840
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8014124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)