Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_K21
(384 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1D4.02c |||human GRASP protein homolog |Schizosaccharomyces ... 27 1.3
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 26 1.8
SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit ... 26 1.8
SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces ... 25 3.1
SPAC9.02c |||N-acetyltransferase|Schizosaccharomyces pombe|chr 1... 25 4.1
SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces pom... 25 4.1
SPAC11D3.13 |||ThiJ domain protein|Schizosaccharomyces pombe|chr... 25 4.1
SPBC14F5.12c |cbh2||centromere binding protein Cbh2|Schizosaccha... 25 5.4
SPBC1348.08c |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 24 7.1
SPBC14C8.01c |cut2|SPBC1815.02c|securin|Schizosaccharomyces pomb... 24 7.1
SPCC285.10c |||SPRY domain protein|Schizosaccharomyces pombe|chr... 24 7.1
SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 24 7.1
SPAC977.07c |||glycoprotein |Schizosaccharomyces pombe|chr 1|||M... 24 7.1
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 24 9.4
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 24 9.4
SPAC869.02c |||nitric oxide dioxygenase |Schizosaccharomyces pom... 24 9.4
SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr... 24 9.4
SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 24 9.4
>SPAC1D4.02c |||human GRASP protein homolog |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 345
Score = 26.6 bits (56), Expect = 1.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 274 GLVEVCAHLAPRVGFVWTLLNAVADS 197
G+V A +AP V +W +LN + DS
Sbjct: 104 GMVLQWASIAPAVDAIWHILNVIDDS 129
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 26.2 bits (55), Expect = 1.8
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 227 YETDSWGKVCTNFNETW 277
YE+ SW + TNFN W
Sbjct: 474 YESRSWFHLVTNFNRIW 490
>SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit
Bgs4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1955
Score = 26.2 bits (55), Expect = 1.8
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 227 YETDSWGKVCTNFNETW 277
YE+ SW + TNFN W
Sbjct: 504 YESRSWFHLITNFNRIW 520
>SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1502
Score = 25.4 bits (53), Expect = 3.1
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +2
Query: 155 CSAGRVCEINEHGEAICNCIQEC 223
C+A R+C++ E C+ +C
Sbjct: 974 CTASRICKVREIASLSLTCLLDC 996
>SPAC9.02c |||N-acetyltransferase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 165
Score = 25.0 bits (52), Expect = 4.1
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +2
Query: 53 FQEAERARVSEILNESRDAPDNEINLDDPCMKVHCSAGRVCEINEHGEAI 202
F EAERA + I + + AP+ ++ L P G V E +
Sbjct: 23 FPEAERASFARIKDRVKRAPEIQLGLFAPTQHTSTLIGHVLTSRTGSETV 72
>SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 25.0 bits (52), Expect = 4.1
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -1
Query: 138 GSSRLISLSGASRDSFRISETRALSAS 58
G+ +L +SRD+FR ++T+A S+S
Sbjct: 47 GNKKLKESQFSSRDNFRTTQTQASSSS 73
>SPAC11D3.13 |||ThiJ domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 222
Score = 25.0 bits (52), Expect = 4.1
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 125 NLDDPCMKVHCSAGRVCEINEHGEAICNCIQECPYETDSWGKVCTNFNE 271
NL K++ G + + HG I CI++ + GK T FNE
Sbjct: 105 NLHKGAAKIYSMGGVIAAVC-HGPVILPCIKDSTGFSIVKGKTVTAFNE 152
>SPBC14F5.12c |cbh2||centromere binding protein
Cbh2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 24.6 bits (51), Expect = 5.4
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 29 AESLDERRFQEAERARVSEILNESRDAPDNEIN 127
A+ LDER F+ E S+ L ++DA N IN
Sbjct: 450 AQFLDEREFETDEEEEESQYLLSTKDA-INAIN 481
>SPBC1348.08c |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 416
Score = 24.2 bits (50), Expect = 7.1
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = -1
Query: 366 SARGVTAPRGTVPSVQARASAVGTTSQSDDQVSLKFVHTLPQESVSYG 223
S + +T + S S VGT +++ S ++ T+P E ++ G
Sbjct: 68 STKSITTSTQSHSSPVIVVSTVGTVTETTISGSTEYTTTIPAEGITSG 115
>SPBC14C8.01c |cut2|SPBC1815.02c|securin|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 301
Score = 24.2 bits (50), Expect = 7.1
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 14/108 (12%)
Frame = -2
Query: 344 PAAQFRVFKPE--------PALSVQPRSPMTRSR*SLCTPC-----PKSRFRMDTPECSC 204
PA+ F V+K P LSV SP+T +L TP + R ++ P S
Sbjct: 174 PASDFHVYKEFSDDDPIQFPLLSVDGDSPLTEKDTNLTTPATLKASDQQRKVLEKPSVSK 233
Query: 203 R*LPRAR*SHRHGRRCSALSCTDRQD*FHCQEHRVTHSG-SRRHELSQ 63
+ R R S + + ++ R RVT SG SRR LS+
Sbjct: 234 QSSSRTRLSTVYRTKLASGKSIPRPLSHKLTRPRVTASGNSRRRPLSR 281
>SPCC285.10c |||SPRY domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 382
Score = 24.2 bits (50), Expect = 7.1
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2
Query: 173 RHGRRCSALSCTDR 132
R+GRRC+ L CT R
Sbjct: 248 RNGRRCAELPCTYR 261
>SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 700
Score = 24.2 bits (50), Expect = 7.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 217 GVSIRNRLLGQGVHKLQRDLVIGLR 291
G S+ N+ L QG+ Q+DLV LR
Sbjct: 382 GPSMENQALQQGILAEQQDLVAQLR 406
>SPAC977.07c |||glycoprotein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 416
Score = 24.2 bits (50), Expect = 7.1
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = -1
Query: 366 SARGVTAPRGTVPSVQARASAVGTTSQSDDQVSLKFVHTLPQESVSYG 223
S + +T + S S VGT +++ S ++ T+P E ++ G
Sbjct: 68 STKSITTSTQSHSSPVIVVSTVGTVTETTISGSTEYTTTIPAEGITSG 115
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 23.8 bits (49), Expect = 9.4
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +2
Query: 206 NCIQECPYETDSWGKVCTNFNETW 277
+C + YE SW TNF+ W
Sbjct: 318 SCFYKSYYEYRSWFHNVTNFSRIW 341
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 23.8 bits (49), Expect = 9.4
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +2
Query: 41 DERRFQEAERARVSEILNESRDAPDNEINLDD 136
DE FQEA + R+ + + ++ D+E+ +++
Sbjct: 2317 DELLFQEAVQMRLFDHATRNNNSVDHEVEMEE 2348
>SPAC869.02c |||nitric oxide dioxygenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 23.8 bits (49), Expect = 9.4
Identities = 10/37 (27%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 74 RVSEILNESRDAPDNEINLDDPCMKV-HCSAGRVCEI 181
+V+E++NES D + DP ++ H G+ +
Sbjct: 183 KVTELINESSDVKSVYLGPKDPAFRISHAHPGQYVSV 219
>SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 661
Score = 23.8 bits (49), Expect = 9.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 2 ESEHLENGMAESLDERRFQEAERARVSEILNESRDAPDNEIN 127
E E L + ES+DE F + +S+I E A NE++
Sbjct: 116 EIERLSVILGESVDEVNFVNGDFEDISDIKLEQLSAKLNELH 157
>SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 486
Score = 23.8 bits (49), Expect = 9.4
Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +2
Query: 203 CNCIQECPYETDSWGKVCTN-FNETWSSD 286
CNC+ + P G VC F +SS+
Sbjct: 22 CNCLPDWPVTLPCGGTVCRKCFRNAYSSE 50
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,546,541
Number of Sequences: 5004
Number of extensions: 29260
Number of successful extensions: 101
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 101
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 126307516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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