Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_K21
         (384 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              39   2e-05
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   1.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   4.9  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   6.5  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   6.5  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   6.5  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    20   8.6  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 39.1 bits (87), Expect = 2e-05
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +2

Query: 134 DPCMKVHCSAGRVCEINEHGE-AICNCIQECPYETDSWGKVCTNFNETWSSDCE 292
           DPC   +C  G+ CE++ +   A+C C+++CP        VC +  + +++ CE
Sbjct: 80  DPCASKYCGIGKECELSPNSTIAVCVCMRKCPRR---HRPVCASNGKIYANHCE 130


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -2

Query: 257 CTPCPKSRFRMDTPECSCR*LPRAR*SHRHG 165
           CT CP  +F+ +    SC   P    S  +G
Sbjct: 262 CTECPIGKFKHEAGSHSCEACPAHSKSSDYG 292


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = +2

Query: 8   EHLENGMAESLDERRFQEAERARVSEILNESRDAPDNEINL 130
           E L NG+   L  +R + ++ A  + +   +  + D  IN+
Sbjct: 830 EILANGVLSDLSIKRTERSDSALFTCVATNAFGSDDTSINM 870


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 224 PYETDSWGKVCTNFNE 271
           P   +S+G   TNFNE
Sbjct: 456 PIIAESYGSGSTNFNE 471


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 224 PYETDSWGKVCTNFNE 271
           P   +S+G   TNFNE
Sbjct: 456 PIIAESYGSGSTNFNE 471


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 224 PYETDSWGKVCTNFNE 271
           P   +S+G   TNFNE
Sbjct: 456 PIIAESYGSGSTNFNE 471


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 212 IQECPYETDSW 244
           +QECP   +SW
Sbjct: 153 VQECPLIFESW 163


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,347
Number of Sequences: 438
Number of extensions: 2451
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9424380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)