Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_K19
         (595 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    28   0.068
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    27   0.12 
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.5  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.5  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.5  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   5.9  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   7.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.8  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   7.8  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   7.8  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   7.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   7.8  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 27.9 bits (59), Expect = 0.068
 Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
 Frame = +1

Query: 286 PTENMRFR-TESLVFKVAESATEEEIKRMNHYEYPEMSKHMGDFDLRVMPGEFSDSEILV 462
           P E + +  TE   F     +  +    +   + P   KH+    L+ + G     E+L 
Sbjct: 53  PDERITYSWTEINAFANVSPSKTKFFNLIKRKDSPVQKKHI----LKNVFGVAYPGELLA 108

Query: 463 LLGENGTGKTTFIRML 510
           +LG +G GKTT +  L
Sbjct: 109 ILGSSGAGKTTLLNTL 124


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 27.1 bits (57), Expect = 0.12
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +1

Query: 385 PEMSKHMGDFDLRVMPGEFSDSEILVLLGENGTGKTTFIRML 510
           P   KH+    L+ + G     E+L +LG +G GKTT +  L
Sbjct: 87  PVQKKHI----LKNVFGVAYPGELLAILGSSGAGKTTLLNTL 124


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 417 LTCDAWRILRFRDFGFTW*E 476
           LT +AW  L + D+   W E
Sbjct: 50  LTTNAWLNLEWNDYNLKWNE 69


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 417 LTCDAWRILRFRDFGFTW*E 476
           LT +AW  L + D+   W E
Sbjct: 50  LTTNAWLNLEWNDYNLKWNE 69


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 417 LTCDAWRILRFRDFGFTW*E 476
           LT +AW  L + D+   W E
Sbjct: 50  LTTNAWLNLEWNDYNLKWNE 69


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 402 MFRHFWIFIVIHTFYL 355
           MF   +IFIV+  FY+
Sbjct: 240 MFTSHFIFIVVSIFYM 255


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 510 SWKSGTG*WFWAAST 554
           S KS +G W+W  +T
Sbjct: 22  SRKSDSGIWYWQCNT 36


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 526 PDDGSGQLPQLHISYKPQKIS 588
           P DG+  + +  I YK  K+S
Sbjct: 919 PFDGNSPITRYMIEYKQSKVS 939


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/28 (25%), Positives = 14/28 (50%)
 Frame = -2

Query: 177 IIQY*QIMLNYNDELIRVYKRSNCACSV 94
           I+ Y  +++ +ND L+        +C V
Sbjct: 365 IVSYELVLMQFNDSLLETISEQIDSCPV 392


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/28 (25%), Positives = 14/28 (50%)
 Frame = -2

Query: 177 IIQY*QIMLNYNDELIRVYKRSNCACSV 94
           I+ Y  +++ +ND L+        +C V
Sbjct: 400 IVSYELVLMQFNDSLLETISEQIDSCPV 427


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/28 (25%), Positives = 14/28 (50%)
 Frame = -2

Query: 177 IIQY*QIMLNYNDELIRVYKRSNCACSV 94
           I+ Y  +++ +ND L+        +C V
Sbjct: 400 IVSYELVLMQFNDSLLETISEQIDSCPV 427


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 6/23 (26%), Positives = 13/23 (56%)
 Frame = -1

Query: 226 HHKHLAHHRDSR*NQIDNPILTN 158
           HH H  HH  ++ + +++ +  N
Sbjct: 322 HHHHAGHHIHAQHHVVNHHVAAN 344


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,651
Number of Sequences: 336
Number of extensions: 2917
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)