Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_K19
(595 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 245 4e-66
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 55 9e-09
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 52 5e-08
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 38 0.001
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 35 0.010
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 34 0.018
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 32 0.055
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 32 0.073
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 32 0.073
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 31 0.17
SPBC1105.15c |htd2||3-hydroxyacyl-ACP dehydratase Htd2 |Schizosa... 29 0.39
SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase Prp16|... 29 0.39
SPBC18H10.10c |cwc16||complexed with Cdc5 protein Cwf16|Schizosa... 29 0.39
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 29 0.51
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 29 0.51
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 29 0.68
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 28 0.89
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 28 0.89
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 28 0.89
SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subuni... 28 1.2
SPAC637.08 |||iron-sulfur cluster assembly ATPase Nbp35|Schizosa... 28 1.2
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 28 1.2
SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog... 28 1.2
SPAC22F8.06 |pam1||20S proteasome component beta 6|Schizosacchar... 27 1.6
SPBC16H5.10c |prp43||ATP-dependent RNA helicase Prp43|Schizosacc... 27 1.6
SPAC7D4.11c |sec39||secretory pathway protein Sec39 |Schizosacch... 27 1.6
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 27 2.1
SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos... 27 2.1
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 27 2.1
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 27 2.1
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 2.1
SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces ... 27 2.1
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 27 2.7
SPAC19D5.05c |||U3 snoRNP-associated protein Imp3 |Schizosacchar... 27 2.7
SPAC2G11.11c |prh1||ATP-dependent RNA helicase Prh1|Schizosaccha... 27 2.7
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 27 2.7
SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces pombe... 26 3.6
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 26 4.8
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 26 4.8
SPAC23C4.14 |alg1||mannosyltransferase complex subunit Alg1 |Sch... 26 4.8
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 25 6.3
SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha... 25 6.3
SPAC19A8.11c |||recombination protein Irc6 |Schizosaccharomyces ... 25 8.3
SPBC119.15 |||AAA family ATPase, unknown biological role|Schizos... 25 8.3
SPCC777.05 |gtr2||Gtr1/RagA G protein Gtr2|Schizosaccharomyces p... 25 8.3
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 245 bits (599), Expect = 4e-66
Identities = 119/198 (60%), Positives = 145/198 (73%)
Frame = +1
Query: 1 QRFACAMVCIQNADIFMFDEPSSYLDVKQRLNAARTIRSLINPDKFIIVVEHDLSVLDYL 180
QRFA A V Q AD++MFDEPSSYLD+KQRL A R IRSL+ ++IVVEHDLSVLDYL
Sbjct: 226 QRFAIAAVATQKADVYMFDEPSSYLDIKQRLKAGRVIRSLLATTNYVIVVEHDLSVLDYL 285
Query: 181 SDFICCLYGVPGAYGVVTMPFSVREGINIFLDGFVPTENMRFRTESLVFKVAESATEEEI 360
SDF+C LYGVP YGVVT+P+SVREGINIFLDG +PTEN+RFR+E+L F++A+++ E
Sbjct: 286 SDFVCVLYGVPSMYGVVTLPYSVREGINIFLDGHIPTENLRFRSEALTFRLADASDEITA 345
Query: 361 KRMNHYEYPEMSKHMGDFDLRVMPGEFSDSEILVLLGENGTGKTTFIRMLAGNLEPDDGS 540
R Y YP+ GDF L + G FSD+EI+VLLGENGTGKTTF + +A N +
Sbjct: 346 DRTAEYNYPDHVIEQGDFKLTIKSGGFSDAEIIVLLGENGTGKTTFCKWMAKNSD----- 400
Query: 541 GQLPQLHISYKPQKISPK 594
L IS KPQ I+PK
Sbjct: 401 -----LKISMKPQTIAPK 413
Score = 67.3 bits (157), Expect = 2e-12
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
Frame = +1
Query: 1 QRFACAMVCIQNADIFMFDEPSSYLDVKQRLNAARTIRS-LINPDKFIIVVEHDLSVLDY 177
QR A + AD+++ DEPS+YLD +QR+ A++ IR ++N K +VEHD + Y
Sbjct: 462 QRVAICLALGMPADVYLIDEPSAYLDSEQRIIASKVIRRFIVNSRKTAFIVEHDFIMATY 521
Query: 178 LSDFICCLYGVPGAYGVVTMPFSVREGINIFLDGFVPTENMRFRTESLVFKVAESATEEE 357
L+D + G P P S+ G+N FL T T +S ++E
Sbjct: 522 LADRVILFEGQPSRDARCNPPQSLLTGMNTFLKNLDVTFRRDPNTLRPRINKFDSQMDQE 581
Query: 358 IKRMNHYEYPE 390
K +Y + E
Sbjct: 582 QKNAGNYFFLE 592
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 54.8 bits (126), Expect = 9e-09
Identities = 60/199 (30%), Positives = 88/199 (44%), Gaps = 11/199 (5%)
Frame = +1
Query: 16 AMVCIQNADIFMFDEPSSYLDVKQRLNAARTIRSLINPDKFI--IVVEHDLSVLDYLSDF 189
A +Q ADI + DEP+++LDV N A + + + K I ++V HD S LD++
Sbjct: 574 ARAMLQKADILLLDEPTNHLDVA---NIA-WLEAYLTSQKNITCLIVSHDSSFLDHVCTD 629
Query: 190 ICCLYGVP------GAY-GVVTMPFSVREGINIFLDGFVPTENMRFRTESLVFKVAESAT 348
I GV G Y G ++ V+ + E F ++ V S T
Sbjct: 630 IIHYEGVKNQAKKLGYYQGNLSAFVKVKPEAKSYYTLTATNEKFVFPPPGILTGV-RSNT 688
Query: 349 EEEIKRMN-HYEYPEMSKHMGDFDLRVMPGEFSDSEILVLLGENGTGKTTFIRMLAGNLE 525
+K N Y YP K D V G S S + +LG NG GK+T I++L G +
Sbjct: 689 RLILKMTNASYTYPNAKKKSLD---NVTVG-LSLSSRVAILGPNGAGKSTLIKVLIGEVI 744
Query: 526 PDDGS-GQLPQLHISYKPQ 579
P +G + P L + Y Q
Sbjct: 745 PQEGKVFKHPNLRVGYVAQ 763
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 52.4 bits (120), Expect = 5e-08
Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 4/182 (2%)
Frame = +1
Query: 4 RFACAMVCIQNADIFMFDEPSSYLDVKQRLNAARTIRSLIN-PDKFIIVVEHDLSVLDYL 180
+ A +N DI + DEP+++LDV +N A L+N D I+V HD LD++
Sbjct: 556 KLALTRAMFKNPDILLLDEPTNHLDV---VNVAWLENFLVNQKDVSSIIVSHDSGFLDHV 612
Query: 181 SDFICCLYGVPGAYGVVTMPFSVREGINIFLDGFVPTENMRFRTESLVFKVAESATEEEI 360
I + M V++ + + M F+ F + I
Sbjct: 613 VQAIIHYERFKLRKYLGNMSEFVKKVPSAKSYYELGASEMEFKFPEPGFLEGVKTKQRAI 672
Query: 361 KRMNH--YEYPEMSK-HMGDFDLRVMPGEFSDSEILVLLGENGTGKTTFIRMLAGNLEPD 531
++ H ++YP SK + D +V S S + ++G NG GK+T I++L G L P
Sbjct: 673 IKVQHMSFQYPGTSKPQLNDISFQV-----SLSSRIAVIGPNGAGKSTLIKVLTGELLPT 727
Query: 532 DG 537
G
Sbjct: 728 VG 729
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 37.9 bits (84), Expect = 0.001
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +1
Query: 406 GDFDLRVMPGEFSDSEILVLLGENGTGKTTFIRMLAGNLEPDDGSGQLPQLH-ISYKPQ 579
GDF LR + F +++ +++G G+GK++ I L G L + GS LP+ +SY Q
Sbjct: 627 GDFCLRDLNIVFPRNKLSIVIGPTGSGKSSLISALLGELSLNKGSYNLPRSKGVSYVSQ 685
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 34.7 bits (76), Expect = 0.010
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +1
Query: 448 SEILVLLGENGTGKTTFIRMLAGNL 522
+E L+L+GE GTGKTT I++LAG L
Sbjct: 467 NEPLLLVGETGTGKTTTIQLLAGLL 491
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 33.9 bits (74), Expect = 0.018
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +1
Query: 4 RFACAMVCIQNADIFMFDEPSSYLDVKQRLNAARTIRSLINPDKFIIVVEHDLSVLD 174
R A A + +QN I + DEP+++LD++ R ++ +I+V HD+ LD
Sbjct: 644 RVAFACLGLQNPHILILDEPTNHLDMESMDALTRAVKRF---QGGVILVSHDVDFLD 697
Score = 33.5 bits (73), Expect = 0.024
Identities = 54/234 (23%), Positives = 97/234 (41%), Gaps = 42/234 (17%)
Frame = +1
Query: 4 RFACAMVCIQNADIFMFDEPSSYLDVKQRLNAARTIRSLINPDKFIIVVEHDLSVLDYLS 183
R + A D+ + DEPS+ LDV + +++ N ++VV HD S L+ ++
Sbjct: 362 RLSLARALFCQPDLLLLDEPSNMLDVPSIAFLSEYLQTYKN---IVLVVSHDRSFLNEVA 418
Query: 184 DFICCLYGVPGAY--GVVTMPFSVREG------------------INIFLDGFVPTENMR 303
I + Y G + ++ RE + F+D F
Sbjct: 419 TDIIHQHSERLDYYKGNFSQFYATREERCKNQLREYEKQMEYRKHLQSFIDKFRYNAAKS 478
Query: 304 FRTESLVFKVAE------SATEEEIKRMNHYEYPEMSK------HMGDFDLRVMPG---- 435
+S + K+ + TEEE++ +E+P + K M D + +PG
Sbjct: 479 SEAQSRIKKLEKLPILEKPQTEEEVE----FEFPPVEKISPPILQMSDVNFEYVPGHPIL 534
Query: 436 EFSDSEILV-----LLGENGTGKTTFIRMLAGNLEPDDG-SGQLPQLHISYKPQ 579
+ D ++ + ++G NG GK+T +++L L P G + P+L I+Y Q
Sbjct: 535 KHVDIDVQMDSRIGVVGPNGAGKSTMLKLLIEQLHPTSGIVSRHPRLRIAYFAQ 588
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 32.3 bits (70), Expect = 0.055
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 457 LVLLGENGTGKTTFIRMLAGNLEPDDGS 540
+ L+G NG GKTT I+++ ++P GS
Sbjct: 623 VALVGPNGAGKTTLIKLILEKVQPSTGS 650
Score = 26.2 bits (55), Expect = 3.6
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 463 LLGENGTGKTTFIRMLAGNLEPDDGSGQLPQLHISYKPQKIS 588
L+ NG+GK+T + +A L P S L Y P +++
Sbjct: 306 LIAPNGSGKSTLLHAIACGLIPTPSSLDFYLLDREYIPNELT 347
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 31.9 bits (69), Expect = 0.073
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +1
Query: 445 DSEILVLLGENGTGKTTFIRMLAGNLEPDDGS 540
DS + ++ G+NGTGK+T + ++ G L P +G+
Sbjct: 416 DSRVAIV-GKNGTGKSTLLNLITGLLIPIEGN 446
Score = 27.5 bits (58), Expect = 1.6
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 463 LLGENGTGKTTFIRMLA 513
LLG+NG+GK+TF+ +A
Sbjct: 106 LLGDNGSGKSTFLESVA 122
Score = 26.6 bits (56), Expect = 2.7
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +1
Query: 4 RFACAMVCIQNADIFMFDEPSSYLDVKQRLNAARTIRSLINPDKFIIVVEHDLSVLDYLS 183
R A + ++ I + DEP+++LD+ A+ I +++V HD ++ +S
Sbjct: 520 RVVFAALALEQPHILLLDEPTNHLDITSIDALAKAINVWTGG---VVLVSHDFRLIGQVS 576
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 31.9 bits (69), Expect = 0.073
Identities = 15/24 (62%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = +1
Query: 457 LVLLGENGTGKTTFI-RMLAGNLE 525
LVL+G+ GTGKTTF+ R L G E
Sbjct: 12 LVLVGDGGTGKTTFVKRHLTGEFE 35
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 30.7 bits (66), Expect = 0.17
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +1
Query: 442 SDSEILVLLGENGTGKTTFI 501
S ++ILVLLGE G+GKTT I
Sbjct: 524 SKNQILVLLGETGSGKTTQI 543
>SPBC1105.15c |htd2||3-hydroxyacyl-ACP dehydratase Htd2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 300
Score = 29.5 bits (63), Expect = 0.39
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 382 YPEMSKHMGDFDLRVMPGEFSDSEILVLLGENG 480
YP+MSK+M F+ R++ F + + + + E G
Sbjct: 244 YPQMSKNMKRFEFRLLSPAFVNQPLRICISETG 276
>SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase
Prp16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 29.5 bits (63), Expect = 0.39
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 334 AESATEEEIKRMNHYEYPEMSKHMGDFDLRV-MPGEFSDSEILVLLGENGTGKTT 495
+E + +++ + Y E + + F +R + D+++L+++GE G+GKTT
Sbjct: 469 SEQSNKKDTEFARTKSYREQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTT 523
>SPBC18H10.10c |cwc16||complexed with Cdc5 protein
Cwf16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 294
Score = 29.5 bits (63), Expect = 0.39
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 397 KHMGDFDLRVMPGEFSDSEILVLLGENGTGKTTFIRML 510
K+ D+ ++P SD + +LL +N GK FIR L
Sbjct: 182 KNRAALDIDILPPSSSDKDKALLLLDNELGKNKFIRKL 219
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 29.1 bits (62), Expect = 0.51
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +1
Query: 436 EFSDSEILVLLGENGTGKTTFIRMLAGNLEP 528
E + + ++G G+G+TTF+R + G+ P
Sbjct: 26 ELARKQNWAIIGNTGSGRTTFLRCIQGSFTP 56
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 445 DSEILVLLGENGTGKTTFIRMLAGN 519
+ E L G NG+GKTT + + G+
Sbjct: 289 EGERWALTGSNGSGKTTLLAYVVGD 313
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 29.1 bits (62), Expect = 0.51
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 376 YEYPEMSKHMGDFDLRVMPGEFSDSEILVLLGENGTGKTTFIRMLAGNLEPDDGS 540
+ Y + D + PG+ ++ L+GE+G GK+T +R+L + + GS
Sbjct: 591 FAYDPRKPVLSDINFVAQPGK-----VIALVGESGGGKSTIMRILLRFFDVNSGS 640
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 28.7 bits (61), Expect = 0.68
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 1 QRFACAMVCIQNADIFMFDEPSSYLDVK-QRLNAARTIRSLINPDKFIIVVEHDLSV 168
QR + A NA++++FD+ S LDV R S + K II+ H++S+
Sbjct: 713 QRVSLARALYSNAEVYIFDDIFSALDVSTSRKIYESCFLSTLLQHKTIILFTHNVSL 769
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 28.3 bits (60), Expect = 0.89
Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +1
Query: 457 LVLLGENGTGKTTFIRML-AGNLEPD 531
++L G +GTGKTTF L A +L+P+
Sbjct: 33 IMLCGASGTGKTTFFNTLFATSLQPE 58
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 28.3 bits (60), Expect = 0.89
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +1
Query: 349 EEEIKRMNHYEYPEMSKHMGDFDLRVMPGEFSDSEILVLLGENGTGKTTFIRMLAGNLEP 528
E +K+M + + ++ +D R +P +L G G+GKT+F+ LAG L+
Sbjct: 213 ESNVKKMITDDVHDFLRNSQWYDTRGIPYRRG----YLLYGPPGSGKTSFLYALAGELDY 268
Query: 529 D 531
D
Sbjct: 269 D 269
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter
Bfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1530
Score = 28.3 bits (60), Expect = 0.89
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +1
Query: 451 EILVLLGENGTGKTTFIRMLAGNLEPDDGSGQL 549
++ L+GE+G GKTT + +LA ++ +G +
Sbjct: 912 KLTALMGESGAGKTTLLNVLAQRVDTGVVTGDM 944
>SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subunit
Orc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 707
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 457 LVLLGENGTGKTTFIRMLAGNLEPDDGSGQLPQ 555
L + G GTGKT + + NL+ GQLP+
Sbjct: 364 LYISGTPGTGKTATVHEVIWNLQELSREGQLPE 396
>SPAC637.08 |||iron-sulfur cluster assembly ATPase
Nbp35|Schizosaccharomyces pombe|chr 1|||Manual
Length = 317
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 451 EILVLLGENGTGKTTFIRMLAGNLEPDD 534
+ILVL G+ G GK+TF LA L ++
Sbjct: 62 KILVLSGKGGVGKSTFSSQLAWGLSLEE 89
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 451 EILVLLGENGTGKTTFIRMLAGNLEPDDGS 540
E++ ++G +G+GK+TFI +L P G+
Sbjct: 463 ELVHIIGPSGSGKSTFISLLLRYFSPTYGN 492
>SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 982
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 436 EFSDSEILVLLGENGTGKTTFIRML 510
E SE+L++ G N GK+T+IR +
Sbjct: 710 EHGSSELLIITGPNMGGKSTYIRQV 734
>SPAC22F8.06 |pam1||20S proteasome component beta
6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 225
Score = 27.5 bits (58), Expect = 1.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 147 YNDELIRVYKRSNCACSVQTLLYVK 73
Y+D R +CAC V+TLLY K
Sbjct: 79 YHDNHERKMSAQSCACMVRTLLYGK 103
>SPBC16H5.10c |prp43||ATP-dependent RNA helicase
Prp43|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 27.5 bits (58), Expect = 1.6
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1
Query: 439 FSDSEILVLLGENGTGKTTFI 501
+ +++I+V +GE G+GKTT I
Sbjct: 88 YHENQIIVFVGETGSGKTTQI 108
>SPAC7D4.11c |sec39||secretory pathway protein Sec39
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 769
Score = 27.5 bits (58), Expect = 1.6
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +1
Query: 16 AMVCIQNADIFMFDEPSSYLDVKQRLNAARTIRSLINPDKFII 144
A+ C + D+F+ EP+ +D+++RLN+ SLI P K I+
Sbjct: 477 ALAC-KVLDVFVDCEPT--IDLRRRLNSLVNACSLIQPFKLIL 516
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1465
Score = 27.1 bits (57), Expect = 2.1
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +1
Query: 370 NHYEYPEMSKHMGD--FDLRVMPGEFSDSEILVLLGENGTGKTTFIRMLAGNLEPDDG 537
NHY +K+ D F L + E S E + ++G G GK+T L +EP +G
Sbjct: 1229 NHYS----AKYREDLSFALNNINIEISPREKIGIVGRTGAGKSTLAMALFRIIEPTEG 1282
Score = 25.0 bits (52), Expect = 8.3
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = +1
Query: 445 DSEILVLLGENGTGKTTFIRMLAGNLEPDDGS 540
+ E+ + G+ G GK++ + GN+ + GS
Sbjct: 606 NGELTCIFGKVGAGKSSLLEACMGNMYKNSGS 637
>SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit
Caf16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 27.1 bits (57), Expect = 2.1
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +1
Query: 460 VLLGENGTGKTTFIRMLAG 516
+L+G NG GK+T +++L+G
Sbjct: 34 LLVGANGAGKSTLLKLLSG 52
>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1573
Score = 27.1 bits (57), Expect = 2.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 427 MPGEFSDSEILVLLGENGTGKTTFIRMLAGNL 522
+ G S + ++L+G G GKTT +++A L
Sbjct: 856 LKGSISKNASIILIGMRGAGKTTIGKIIAKQL 887
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 27.1 bits (57), Expect = 2.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 451 EILVLLGENGTGKTTFIRMLAGNLEPDDGSGQLPQLHIS 567
E + ++G G GK+T L +EP G QL ++I+
Sbjct: 1252 EKIGIVGRTGAGKSTLTLALFRLIEPTSGDIQLDDINIT 1290
Score = 26.2 bits (55), Expect = 3.6
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +1
Query: 43 IFMFDEPSSYLDVKQRLNAARTIRSLINPDKFIIVVEHDLSVL 171
+ + DE ++ +DV+ RTIR N D+ I+ + H ++ +
Sbjct: 1381 VLLLDEATAAVDVETDAIVQRTIRERFN-DRTILTIAHRINTV 1422
Score = 25.4 bits (53), Expect = 6.3
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +1
Query: 451 EILVLLGENGTGKTTFIRMLAGNLEPDDGS 540
E+ ++G+ G GK++ + GN++ GS
Sbjct: 610 ELCCIVGKVGMGKSSLLEACLGNMQKHSGS 639
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 448 SEILVLLGENGTGKTTFIRML 510
S + +++G+NG+GKTT I L
Sbjct: 27 SPLTLIVGQNGSGKTTIIECL 47
>SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 511
Score = 27.1 bits (57), Expect = 2.1
Identities = 16/68 (23%), Positives = 34/68 (50%)
Frame = -3
Query: 458 KISESENSPGITRKSKSPICLDISGYXXXXXXXXXXSVADSATLNTKDSVLNRIFSVGTN 279
+I + + + + S+ I +D++ + S +S++ N SVLNR+ + T+
Sbjct: 243 RIIDPKTRHSLKKASRLQI-IDLASFSKGSQRNESISSFESSSNNKSLSVLNRVIAALTS 301
Query: 278 PSRNILIP 255
++LIP
Sbjct: 302 KKNDVLIP 309
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 26.6 bits (56), Expect = 2.7
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +3
Query: 453 DFGFTW*EW--YWENNIH*NVSWKSGTG*WFW 542
DFG TW EW Y NN + N+S S + + W
Sbjct: 885 DFGSTWTEWQTYDGNNTYCNLSGWSQSSRYGW 916
>SPAC19D5.05c |||U3 snoRNP-associated protein Imp3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 183
Score = 26.6 bits (56), Expect = 2.7
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -3
Query: 509 NILMNVVFPVPFSPSKTKISESENSPGIT 423
N+L+ +F + PSK+K+S+ EN ++
Sbjct: 76 NLLLEKLFDMGILPSKSKMSDIENKANVS 104
>SPAC2G11.11c |prh1||ATP-dependent RNA helicase
Prh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 719
Score = 26.6 bits (56), Expect = 2.7
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +1
Query: 436 EFSDSEILVLLGENGTGKTTFI 501
+ D+ ++V++GE G+GK+T I
Sbjct: 108 QIQDNRVIVVVGETGSGKSTQI 129
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 26.6 bits (56), Expect = 2.7
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +1
Query: 328 KVAESATEEEIK-RMNHYEYPEMS--KHMGDFDLRVMPGEFSDSEILVLLGENGTGKTTF 498
K ES I+ R + YP K + +L V PG+F + +G +G GK+T
Sbjct: 1109 KKVESLQSAAIEFRQVEFSYPTRRHIKVLRGLNLTVKPGQF-----VAFVGSSGCGKSTT 1163
Query: 499 IRMLAGNLEPDDGS 540
I ++ + D+G+
Sbjct: 1164 IGLIERFYDCDNGA 1177
>SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 504
Score = 26.2 bits (55), Expect = 3.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 457 LVLLGENGTGKTTFIRMLA 513
++L G GTGKTT R++A
Sbjct: 123 MILWGSAGTGKTTLARLIA 141
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 457 LVLLGENGTGKTTFIRML 510
L+L GE+G GKTTF L
Sbjct: 31 LMLCGESGLGKTTFCNTL 48
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 460 VLLGENGTGKTTFIRMLAGNLEPDD 534
VL+GE G GKT+ LA + DD
Sbjct: 206 VLIGEPGVGKTSIAEGLARRIIDDD 230
>SPAC23C4.14 |alg1||mannosyltransferase complex subunit Alg1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 424
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 455 FWFYLVRMVLGKQHSLEC*LEIWNRMMVLGSFHSFT 562
F + ++ + LGKQH+ L+I+ + M G++ T
Sbjct: 156 FGYSILALKLGKQHTFVKLLKIYEKYMARGAYAHLT 191
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 433 GEFSDSEILVLLGENGTGKTTFIRMLA 513
G + + LLGEN +GK+ +R+L+
Sbjct: 782 GYLKKNTLTALLGENKSGKSVLLRILS 808
>SPAC458.03 |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 868
Score = 25.4 bits (53), Expect = 6.3
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Frame = +1
Query: 154 HDLSVLDYLSDFICCLYGVPGAYGVVTMPFS---VREGINIFLDGFVPTENMRFRTESLV 324
H + + + +S + P A+ V M + V + ++ D F+P E + ES++
Sbjct: 391 HGMIMAEVISTYSGVSLSNPLAFDVPIMKTTKAKVLKSLSSLKDEFLPIEILN--DESVI 448
Query: 325 FKVAESATEEEIKRMNHYEYPEMSKH 402
AE++ E+E + H E P +SK+
Sbjct: 449 ---AETSIEKEETNVTHLEKPVISKN 471
>SPAC19A8.11c |||recombination protein Irc6 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 246
Score = 25.0 bits (52), Expect = 8.3
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = +1
Query: 454 ILVLLGENGTGKTTFIRMLAGNL 522
+++++G + +GK FI+ L G+L
Sbjct: 3 VILVIGRSNSGKLDFIKALTGSL 25
>SPBC119.15 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 25.0 bits (52), Expect = 8.3
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +1
Query: 457 LVLLGENGTGKTTFIRMLAGNL 522
++++G G+GKTTF++ L +L
Sbjct: 11 IIVVGMAGSGKTTFMQQLNAHL 32
>SPCC777.05 |gtr2||Gtr1/RagA G protein Gtr2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 314
Score = 25.0 bits (52), Expect = 8.3
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 43 IFMFDEPSSYLDVKQRLNAARTIRSLINPDKFIIVVEHDLSVLDYLSD 186
IF+ D YLD RL+ INP+ I +E + +D LSD
Sbjct: 81 IFVIDAQDDYLDALARLHVTVARVVTINPN---ICIEVFIHKVDGLSD 125
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,479,919
Number of Sequences: 5004
Number of extensions: 50094
Number of successful extensions: 240
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 237
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 258201856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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