Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_K19
(595 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35286| Best HMM Match : No HMM Matches (HMM E-Value=.) 219 3e-61
SB_25408| Best HMM Match : ABC_tran (HMM E-Value=0) 43 2e-04
SB_16306| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_27355| Best HMM Match : ABC_tran (HMM E-Value=1.1e-37) 40 0.001
SB_52373| Best HMM Match : ABC_tran (HMM E-Value=3.4e-11) 36 0.025
SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0) 36 0.025
SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_44672| Best HMM Match : ABC_tran (HMM E-Value=4.2039e-44) 35 0.043
SB_37511| Best HMM Match : ABC_tran (HMM E-Value=0) 35 0.043
SB_36627| Best HMM Match : ABC_tran (HMM E-Value=5.4e-06) 35 0.043
SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0) 34 0.075
SB_56902| Best HMM Match : NACHT (HMM E-Value=1.5e-10) 33 0.17
SB_26155| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_58724| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.30
SB_7365| Best HMM Match : ABC_membrane (HMM E-Value=0) 32 0.30
SB_53189| Best HMM Match : ABC_tran (HMM E-Value=0.021) 32 0.40
SB_20094| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_3746| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_26620| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_22546| Best HMM Match : ABC_tran (HMM E-Value=0) 31 0.53
SB_24754| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 31 0.53
SB_14067| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_6133| Best HMM Match : ABC_tran (HMM E-Value=9e-09) 31 0.70
SB_1013| Best HMM Match : Peptidase_M1 (HMM E-Value=0.041) 30 1.2
SB_59051| Best HMM Match : ABC_tran (HMM E-Value=2.4e-41) 30 1.2
SB_37300| Best HMM Match : MMR_HSR1 (HMM E-Value=0.061) 30 1.6
SB_38838| Best HMM Match : ABC_tran (HMM E-Value=0.24) 29 2.8
SB_25957| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0) 29 3.7
SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0) 29 3.7
SB_54124| Best HMM Match : AAA (HMM E-Value=7.8e-08) 29 3.7
SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_34997| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_40168| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_48172| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_45235| Best HMM Match : CBM_20 (HMM E-Value=0.91) 28 6.5
SB_40345| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_30948| Best HMM Match : NACHT (HMM E-Value=0.0023) 28 6.5
SB_30636| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_51198| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_41103| Best HMM Match : p450 (HMM E-Value=0) 27 8.6
SB_34413| Best HMM Match : Myosin_head (HMM E-Value=0) 27 8.6
SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14) 27 8.6
SB_55554| Best HMM Match : AAA (HMM E-Value=0.022) 27 8.6
SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0) 27 8.6
SB_36388| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_33973| Best HMM Match : ABC_tran (HMM E-Value=0) 27 8.6
SB_23377| Best HMM Match : WH1 (HMM E-Value=2.8) 27 8.6
>SB_35286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 219 bits (535), Expect(2) = 3e-61
Identities = 107/155 (69%), Positives = 125/155 (80%)
Frame = +1
Query: 130 DKFIIVVEHDLSVLDYLSDFICCLYGVPGAYGVVTMPFSVREGINIFLDGFVPTENMRFR 309
D +IIVVEHDLSVLDYLSDFICCLYG PGAYGVVT+PFSVREGINIFLDGFVPTEN+RFR
Sbjct: 241 DVYIIVVEHDLSVLDYLSDFICCLYGTPGAYGVVTLPFSVREGINIFLDGFVPTENLRFR 300
Query: 310 TESLVFKVAESATEEEIKRMNHYEYPEMSKHMGDFDLRVMPGEFSDSEILVLLGENGTGK 489
SLVFKV+E+A + I+ +P DF + + GEF+DSEI+V+LGENGTGK
Sbjct: 301 DTSLVFKVSETADKVSIEPSVIGVWPGGLNE--DFQMNIDAGEFTDSEIIVMLGENGTGK 358
Query: 490 TTFIRMLAGNLEPDDGSGQLPQLHISYKPQKISPK 594
TTFIRMLAG L PD+ ++P L++SYKPQKISPK
Sbjct: 359 TTFIRMLAGKLSPDNDE-EVPMLNVSYKPQKISPK 392
Score = 43.6 bits (98), Expect = 1e-04
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Frame = +1
Query: 73 LDVKQRLNAARTI-RSLINPDKFIIVVEHDLSVLDYLSDFICCLYGVPGAYGVVTMPFSV 249
L +QRL AA+ I R +++ K VVEHD + YL+D + G+P + P ++
Sbjct: 457 LSGEQRLVAAKVIKRFILHAKKTGFVVEHDFIMATYLADRVIVFEGIPSVKTLANTPQTL 516
Query: 250 REGINIFLDGFVPTENMRFRTESLVFK----VAESATEEEIKRMNHYEYPE 390
G+N FL+ + FR + F+ S + E KR +Y + E
Sbjct: 517 LTGMNRFLESL----EITFRRDPSNFRPRINKLHSVKDTEQKRSGNYFFLE 563
Score = 34.7 bits (76), Expect = 0.057
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +1
Query: 451 EILVLLGENGTGKTTFIRMLAGNLEPDDGSGQLP 552
E+L L+G NG GK+T +++LAG +P+ G P
Sbjct: 112 EVLGLVGTNGIGKSTALKILAGKQKPNLGRHDTP 145
Score = 33.9 bits (74), Expect(2) = 3e-61
Identities = 12/17 (70%), Positives = 17/17 (100%)
Frame = +1
Query: 1 QRFACAMVCIQNADIFM 51
QRFACA+VCIQ+AD+++
Sbjct: 228 QRFACAVVCIQSADVYI 244
>SB_25408| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1636
Score = 43.2 bits (97), Expect = 2e-04
Identities = 37/137 (27%), Positives = 61/137 (44%)
Frame = +1
Query: 130 DKFIIVVEHDLSVLDYLSDFICCLYGVPGAYGVVTMPFSVREGINIFLDGFVPTENMRFR 309
D FI+V++ L +L LS + LY V V +++G N F +G +P + F
Sbjct: 239 DPFILVIQQTLPLLLMLSLVVTALYIVKDI--VHEKERKLKDGDNDFHNGHLPNASTEF- 295
Query: 310 TESLVFKVAESATEEEIKRMNHYEYPEMSKHMGDFDLRVMPGEFSDSEILVLLGENGTGK 489
E ++ +K++ + E K + + + + +I LLG NG GK
Sbjct: 296 LEKEPSRLHAGVVINSLKKV----FSENGKKVAVDGVSL---NMYEGQITALLGHNGAGK 348
Query: 490 TTFIRMLAGNLEPDDGS 540
TT + ML G P G+
Sbjct: 349 TTLMSMLTGLFPPTSGN 365
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +1
Query: 451 EILVLLGENGTGKTTFIRMLAGNLEPDDGSGQLPQLHI 564
E LLG NG GKTT RML G+ G+ + I
Sbjct: 1282 ECFGLLGINGAGKTTTFRMLTGDETMTSGTATVDNYDI 1319
>SB_16306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 958
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = +1
Query: 418 LRVMPGEFSDSEILVLLGENGTGKTTFIRMLAGNLEPDDGSGQLPQLHISYKPQK 582
L+ + G+ E+L L+G +G+GKTT + +LAG + D G + H++ K +K
Sbjct: 25 LKTINGKVRPGEMLALMGPSGSGKTTLLNVLAGRMAKDAGDVLINGKHMNKKLKK 79
>SB_27355| Best HMM Match : ABC_tran (HMM E-Value=1.1e-37)
Length = 226
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +1
Query: 451 EILVLLGENGTGKTTFIRMLAGNLEPDDGS 540
EI+ L+GENG GKTT +R L G L P G+
Sbjct: 2 EIIGLVGENGNGKTTLLRSLCGELNPTSGT 31
>SB_52373| Best HMM Match : ABC_tran (HMM E-Value=3.4e-11)
Length = 406
Score = 35.9 bits (79), Expect = 0.025
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 4 RFACAMVCIQNADIFMFDEPSSYLDVKQRLNA-ARTIRSLINPDKFIIVVEHDLSVLD 174
R + A +ADI++ D+P S LD K R R I L+ DK I+V HDL ++
Sbjct: 204 RVSLARALYLDADIYVLDDPLSALDFKVRRRVFQRCICELLR-DKLCILVTHDLGCIE 260
>SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1702
Score = 35.9 bits (79), Expect = 0.025
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 4 RFACAMVCIQNADIFMFDEPSSYLDVKQRLNA-ARTIRSLINPDKFIIVVEHDLSVLD 174
R + A +ADI++ D+P S LD K R R I L+ DK I+V HDL ++
Sbjct: 912 RVSLARALYLDADIYVLDDPLSALDFKVRRRVFQRCICELLR-DKLCILVTHDLGCIE 968
>SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 683
Score = 35.5 bits (78), Expect = 0.033
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +1
Query: 457 LVLLGENGTGKTTFIRMLAGNLEPDDG 537
+ ++G+NG+GKTT +++L G LEP G
Sbjct: 367 IAVVGDNGSGKTTLLKILLGELEPVKG 393
>SB_44672| Best HMM Match : ABC_tran (HMM E-Value=4.2039e-44)
Length = 945
Score = 35.1 bits (77), Expect = 0.043
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 445 DSEILVLLGENGTGKTTFIRMLAGNLEPDDGSGQLPQLHISYKPQKI 585
+ +I+ LG NG GKTT + +L G P G+G + I + KI
Sbjct: 527 EGQIMSFLGHNGAGKTTTMSILTGLFPPTAGTGYIYGHDIRFDMDKI 573
>SB_37511| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 884
Score = 35.1 bits (77), Expect = 0.043
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 445 DSEILVLLGENGTGKTTFIRMLAGNLEPDDGS 540
+ +I LLG NG GK+T I L G ++P G+
Sbjct: 521 EGQITALLGHNGAGKSTLIGALTGMIQPSSGT 552
>SB_36627| Best HMM Match : ABC_tran (HMM E-Value=5.4e-06)
Length = 240
Score = 35.1 bits (77), Expect = 0.043
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 406 GDFDLRVMPGEFSDSEILVLLGENGTGKTTFIRMLAGNLEPDDGSGQLPQLHIS-YKPQK 582
G LR + + E+ LLG NG GKTT ++ L G + +G+ Q I+ +KP +
Sbjct: 95 GSHILRGLSFDVKVGEVTCLLGRNGVGKTTLLKCLMGLIPAKEGAVQWEGQPITGFKPHQ 154
Score = 30.7 bits (66), Expect = 0.93
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = +1
Query: 19 MVCIQNADIFMFDEPSSYLDVKQRLNAARTIRSLINPDKFIIVVEHDLSVLDYLSDFICC 198
M+ +Q+ + + DEP + + + A +SL ++VVEHD+ + ++D +
Sbjct: 1 MLLVQDPQLLLLDEPVAGMTDAETEFTAELFKSLARKHS-LMVVEHDMGFVGSIADHVTV 59
Query: 199 LY 204
L+
Sbjct: 60 LH 61
>SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 3369
Score = 34.3 bits (75), Expect = 0.075
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 451 EILVLLGENGTGKTTFIRMLAGNLEPDDGSGQL 549
+I LLG NG GKTT + +L G P GS +
Sbjct: 228 QITALLGHNGAGKTTTMSILTGLFTPTSGSAMI 260
Score = 30.7 bits (66), Expect = 0.93
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1
Query: 451 EILVLLGENGTGKTTFIRMLAGNLEPDDGSGQL 549
E LLG NG GKTT ML G+ +G+ L
Sbjct: 1280 ECFGLLGVNGAGKTTTFSMLTGDQSISEGTAYL 1312
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/67 (23%), Positives = 30/67 (44%)
Frame = +1
Query: 1 QRFACAMVCIQNADIFMFDEPSSYLDVKQRLNAARTIRSLINPDKFIIVVEHDLSVLDYL 180
++ CA+ + ++ DEP+S +D R A + K +I+ H + D+L
Sbjct: 339 RKLNCAIALVGGSETVFLDEPTSGMDPYAR-RATWDLLLKHKAGKTVILTTHFMDEADFL 397
Query: 181 SDFICCL 201
D I +
Sbjct: 398 GDRIAIM 404
>SB_56902| Best HMM Match : NACHT (HMM E-Value=1.5e-10)
Length = 1037
Score = 33.1 bits (72), Expect = 0.17
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Frame = +1
Query: 328 KVAESATEEE----IKRMNHYEYPEMSKHMGDFDLRVMPGEFSDSEILVLLGENGTGKTT 495
K A + TEE+ ++ +H E PE+ M D P + S ++L GE+G GKTT
Sbjct: 94 KDAATITEEDKAASMRAGDHQERPEIKVPMYDIFTASEPSKTVRS--VLLEGESGVGKTT 151
Query: 496 FIRMLAGNLEPDDGSGQLPQLHI 564
F + LA + PQ+ I
Sbjct: 152 FCQKLAYDWAKGALPKSFPQVEI 174
>SB_26155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 815
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 418 LRVMPGEFSDSEILVLLGENGTGKTTFIRMLAG 516
++ + G+F E++ +LG +G GK+T I +LAG
Sbjct: 142 IKDVSGKFKSGELVGVLGPSGAGKSTLINVLAG 174
>SB_58724| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 397 KHMGDFDLRVMPGEFSDSEILVLLGENGTGKTTFIRMLAG 516
K G L+ + GE E+ ++G +G GKTT + L+G
Sbjct: 147 KQTGKQVLQSVTGEIRAGEVTAIMGPSGAGKTTLLNTLSG 186
>SB_7365| Best HMM Match : ABC_membrane (HMM E-Value=0)
Length = 1301
Score = 32.3 bits (70), Expect = 0.30
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 373 HYEYPEMS--KHMGDFDLRVMPGEFSDSEILVLLGENGTGKTTFIRMLAGNLEPDDGS 540
H+ YP + K + L V G+ + L+GE+G GK+T I+++ +P++GS
Sbjct: 658 HFYYPSRNEVKVLNGLSLTVRSGQ-----TVALVGESGCGKSTVIKLIQRFYDPENGS 710
>SB_53189| Best HMM Match : ABC_tran (HMM E-Value=0.021)
Length = 127
Score = 31.9 bits (69), Expect = 0.40
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 433 GEFSDSEILVLLGENGTGKTTFIRMLAG 516
G+ + E+ ++G +G GKTTF+ L+G
Sbjct: 12 GKINSGEVTAVMGPSGAGKTTFLNTLSG 39
>SB_20094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 31.9 bits (69), Expect = 0.40
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 451 EILVLLGENGTGKTTFIRMLAGNLEPDDGSGQLPQLHISYKPQK 582
+I ++G +G+GKTT +++L EP +G L + +S QK
Sbjct: 252 KITAIVGTSGSGKTTLMKLLLKFYEPSEGDVLLGKSSLSNLSQK 295
>SB_3746| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 31.9 bits (69), Expect = 0.40
Identities = 17/69 (24%), Positives = 40/69 (57%)
Frame = +1
Query: 373 HYEYPEMSKHMGDFDLRVMPGEFSDSEILVLLGENGTGKTTFIRMLAGNLEPDDGSGQLP 552
H+ ++S + D ++ +F++++++++ G G+GK++ + L G L P +GS +
Sbjct: 80 HWNGTDVSPVLSDINM-----DFNENKLVLVTGPVGSGKSSLLLTLLGELLPSEGSVK-T 133
Query: 553 QLHISYKPQ 579
+ + Y PQ
Sbjct: 134 RGEVVYVPQ 142
>SB_26620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 433
Score = 31.5 bits (68), Expect = 0.53
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 433 GEFSDSEILVLLGENGTGKTTFIRMLAG 516
G+ E+ ++G +G GKTTF+ L+G
Sbjct: 336 GKIKSGEVTAVMGPSGAGKTTFLNTLSG 363
>SB_22546| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 844
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 418 LRVMPGEFSDSEILVLLGENGTGKTTFIRMLAGNLEPDDG 537
LR + E + + L L+G +G GK+T + +L +P+DG
Sbjct: 685 LRGLSLEVNQGQTLALVGPSGCGKSTTVSLLERFYDPEDG 724
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +1
Query: 373 HYEYPEMSKHMGDFDLRVMPG---EFSDSEILVLLGENGTGKTTFIRMLAGNLEPDDGS 540
H++YP D++V+ G + + L+GE+G GK+T I+++ +P +G+
Sbjct: 123 HFQYPSRP------DVKVLKGLHLTIRSGQTVALVGESGCGKSTLIKLVQRFYDPAEGT 175
>SB_24754| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 781
Score = 31.5 bits (68), Expect = 0.53
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 433 GEFSDSEILVLLGENGTGKTTFIRMLAG 516
G+ E+ ++G +G GKTTF+ L+G
Sbjct: 218 GKIKSGEVTAVMGPSGAGKTTFLNTLSG 245
>SB_14067| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 31.5 bits (68), Expect = 0.53
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +1
Query: 457 LVLLGENGTGKTTFIRMLAGNLEPDDG 537
+ L+G NG GK+T ++++ G L P +G
Sbjct: 89 VALVGPNGAGKSTLLKLIEGLLSPTEG 115
>SB_6133| Best HMM Match : ABC_tran (HMM E-Value=9e-09)
Length = 562
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 451 EILVLLGENGTGKTTFIRMLAGNLEPDDGSGQLPQLHISYKPQKI 585
E+ LLG NG GKTT + M+ + GS + + + K+
Sbjct: 320 EVFGLLGPNGAGKTTTLNMMTAGIPASRGSVSVAGYDLQTETHKV 364
>SB_1013| Best HMM Match : Peptidase_M1 (HMM E-Value=0.041)
Length = 999
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -3
Query: 509 NILMNVVF--PVPFSPSKTKISESENSPGITRKSKSPICLDI 390
N LM +V PVP+ T S+N P TRKS SP+C +
Sbjct: 721 NFLMEIVEKDPVPYIRHHTLRVLSDNPP-FTRKSDSPLCTQV 761
>SB_59051| Best HMM Match : ABC_tran (HMM E-Value=2.4e-41)
Length = 474
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 1 QRFACAMVCIQNADIFMFDEPSSYLDVKQRLNAARTIRSLINPDKFIIVVEHDLS-VLDY 177
Q A A + N I + DE +S +D K IRS + II V H LS ++DY
Sbjct: 208 QLVALARALVYNTKILVLDEATSVVDYKTDRLVQEIIRSKFK-NSTIITVPHRLSTIIDY 266
>SB_37300| Best HMM Match : MMR_HSR1 (HMM E-Value=0.061)
Length = 152
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +1
Query: 433 GEFSDSEILVLLGENGTGKTTFIRMLA 513
G+ + E++ ++G +G+GKTT I +LA
Sbjct: 43 GKVNPGELVAVMGASGSGKTTLINVLA 69
>SB_38838| Best HMM Match : ABC_tran (HMM E-Value=0.24)
Length = 169
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 412 FDLRVMPGEFSDSEILVLLGENGTGKTTFIRML 510
F R+ PGE + L+G +G+GKTTFI+++
Sbjct: 86 FSARIAPGER-----VGLVGHSGSGKTTFIKLI 113
>SB_25957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/80 (27%), Positives = 31/80 (38%)
Frame = +1
Query: 289 TENMRFRTESLVFKVAESATEEEIKRMNHYEYPEMSKHMGDFDLRVMPGEFSDSEILVLL 468
T N+ E F E+ +++K +H E E G + SD E VLL
Sbjct: 97 TNNITKEQEVFAFGFTEAL--KKLKEEDHLEIRESDNQTGPDNDGEASDSSSDDESTVLL 154
Query: 469 GENGTGKTTFIRMLAGNLEP 528
E K TFI + +P
Sbjct: 155 DEENDTKITFISYAFNSKQP 174
>SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 4 RFACAMVCIQNADIFMFDEPSSYLDVKQRLNAARTIRSLINPDKFIIVVEHDLSVL 171
R A A + + N D+ + DEP++ LD++ A I +I+V HD ++
Sbjct: 452 RVAFADMALSNPDVVILDEPTNNLDIESIDALAAAINEFTGG---VILVSHDARLI 504
>SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1321
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +1
Query: 4 RFACAMVCIQNADIFMFDEPSSYLDVKQ-RLNAARTIRSLINPDKFIIVVEHDLSVLDYL 180
R A +ADI + D+P S +D R + L+ D+ ++V H L L
Sbjct: 161 RINLARAVYYDADIVLLDDPLSAVDTHVGRQLFDECVYGLLK-DRICVLVTHQLQYLKGA 219
Query: 181 SDFIC 195
+D IC
Sbjct: 220 TDIIC 224
>SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1310
Score = 28.7 bits (61), Expect = 3.7
Identities = 28/122 (22%), Positives = 46/122 (37%), Gaps = 4/122 (3%)
Frame = +1
Query: 4 RFACAMVCIQNADIFMFDEPSSYLDVKQRLNAARTIRSLINPDKFIIVVEHDLSVLDYLS 183
R + A +ADI++ D+P S +D K + + +K I+V H L L +
Sbjct: 589 RVSLARAVYADADIYLLDDPLSAVDAKVGSHLFKECICGALTNKVRILVTHQLQYLKHAD 648
Query: 184 DFICCLYGVPGAYGVVTMPFSVREGINI----FLDGFVPTENMRFRTESLVFKVAESATE 351
I G G GI++ +DG P E + + + A +
Sbjct: 649 SIIVLSDGKIAQKGTFQDMDVSHIGIDVSKDSVIDGAAPVEGQQGHHDLIDGAPAVDMAD 708
Query: 352 EE 357
EE
Sbjct: 709 EE 710
>SB_54124| Best HMM Match : AAA (HMM E-Value=7.8e-08)
Length = 251
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 457 LVLLGENGTGKTTFIRMLAGNL 522
++ +G GTGKTT RM+AG L
Sbjct: 16 VMFVGNPGTGKTTMARMMAGIL 37
>SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1168
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +1
Query: 334 AESATEEEIKRMNHYEYPEMSKHMGDFDLRVMPGEFSDSEILVLLGENGTGKTT 495
AE AT E++R + + + + +M S++ +++L GE G+GKTT
Sbjct: 273 AEPATFIEVEREPEIQAARLQLPILAEEQAIMEA-ISENNVVILCGETGSGKTT 325
>SB_34997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 451 EILVLLGENGTGKTTFIRMLAGNLEPDDGSGQLPQLHISYKPQK 582
E+ ++ G G+GK+T + + G L +GS L + + Y PQK
Sbjct: 503 ELTLINGPGGSGKSTLLLAVLGELPVTEGS-ILTEGRMVYVPQK 545
>SB_40168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1554
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 442 SDSEILVLLGENGTGKTTFIRMLA 513
SD ++VL GE+G GKT+ + +A
Sbjct: 442 SDDRVVVLYGESGCGKTSLMAKIA 465
>SB_48172| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 547
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 485 PVPFSPSKTKISESENSPGITRKSKSPICLDI 390
PV P + K E E P + S SP CLD+
Sbjct: 388 PVDQPPPRPKKPEREEVPEMNSSSGSPSCLDV 419
>SB_45235| Best HMM Match : CBM_20 (HMM E-Value=0.91)
Length = 817
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -3
Query: 326 NTKDSVLNRIFSVGTNPSRNILIPSLTEKGIVTTP*APGTP 204
N ++NR SV TN S+N L + TTP A P
Sbjct: 589 NDTTRIMNRQLSVDTNLSKNALASVAVTLRVTTTPAALNAP 629
>SB_40345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1250
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +1
Query: 4 RFACAMVCIQNADIFMFDEPSSYLDVKQRLNAARTIRSLINPDKFIIVVEHDLSVL 171
R A +ADI++ D+P S +D K + I DK ++V H L L
Sbjct: 545 RIGLARALYADADIYLLDDPLSSVDAKVGRHIFDECVCGILKDKTRVLVTHQLQYL 600
>SB_30948| Best HMM Match : NACHT (HMM E-Value=0.0023)
Length = 180
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/91 (20%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Frame = +1
Query: 313 ESLVFKVAESATEEEIKRMNHYEYPEMSKHMGDFDLR-----VMPGEFSDSEILVLLGEN 477
E + + E+ E + + + P++ + D +++ V+ G+ ++ ++L G++
Sbjct: 17 EMALIEPLENLEEHDFSLDSMFTEPKIVRKDTDLEVKMNNMFVVDGKVKEACKVLLEGDS 76
Query: 478 GTGKTTFIRMLAGNLEPD--DGSGQLPQLHI 564
G GKTT + LA + GS P++ +
Sbjct: 77 GAGKTTLTKKLASDWAKGVLSGSSTFPEVEL 107
>SB_30636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/35 (28%), Positives = 24/35 (68%)
Frame = +1
Query: 436 EFSDSEILVLLGENGTGKTTFIRMLAGNLEPDDGS 540
+ + E++ L+G +G+GK+T +R + +P++G+
Sbjct: 43 DVAPGEVVCLIGPSGSGKSTLLRCVNLLEQPNEGT 77
>SB_51198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1627
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 529 DDGSGQLPQLHISYKPQKISP 591
DDG G L H+S +P K SP
Sbjct: 743 DDGKGGLKNRHVSAQPYKFSP 763
>SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1471
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/91 (20%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Frame = +1
Query: 313 ESLVFKVAESATEEEIKRMNHYEYPEMSKHMGDFDLR-----VMPGEFSDSEILVLLGEN 477
E + + E+ E + + + P++ + D +++ V+ G+ ++ ++L G++
Sbjct: 566 EMALIEPLENLEEHDFSLDSMFTEPKIVRKDTDLEVKMNNMFVVDGKVKEACKVLLEGDS 625
Query: 478 GTGKTTFIRMLAGNLEPD--DGSGQLPQLHI 564
G GKTT + LA + GS P++ +
Sbjct: 626 GAGKTTLTKKLASDWAKGVLSGSSTFPEVEL 656
>SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 27.9 bits (59), Expect = 6.5
Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Frame = +1
Query: 313 ESLVFKVAESATEEEIKRMNHYEYPEMSKHMGDFDLR-----VMPGEFSDSEILVLLGEN 477
E + + E+ E + + + P++ K D +++ V+ G+ + ++L G++
Sbjct: 707 EMALIEPLENLEEHDFSLDSMFTEPKIVKKDTDLEVKMNSMFVVDGKVKKACKVLLEGDS 766
Query: 478 GTGKTTFIRMLAGNLEPD--DGSGQLPQLHI 564
G GKTT + LA + GS P++ +
Sbjct: 767 GAGKTTLTKKLASDWAKGVLSGSSTFPEVEL 797
>SB_41103| Best HMM Match : p450 (HMM E-Value=0)
Length = 524
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -3
Query: 317 DSVLNRIFSVGTNPSRNILIPSLTEK-GIVTTP*APGTP 204
D V + + ++ N + ++ L G VTTP PGTP
Sbjct: 320 DQVKSYVIAISANTDESTMLTVLANSVGAVTTPANPGTP 358
>SB_34413| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 650
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 352 EEIKRMNHYEYPEMSKHMGDFDLRVMPGEFSDSEILVLLGENGTGKT 492
+E K YE P + D R M D+ I++ GE+G+GKT
Sbjct: 64 QEYKMREMYERPPHIFALADASYRAMKRRSEDTCIMIS-GESGSGKT 109
>SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14)
Length = 1197
Score = 27.5 bits (58), Expect = 8.6
Identities = 8/17 (47%), Positives = 16/17 (94%)
Frame = +1
Query: 445 DSEILVLLGENGTGKTT 495
D+++++++GE G+GKTT
Sbjct: 624 DNQVVIIVGETGSGKTT 640
>SB_55554| Best HMM Match : AAA (HMM E-Value=0.022)
Length = 1681
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +1
Query: 457 LVLLGENGTGKTTFIRMLAGNL 522
+V+LG+ G+GKTT + L+G++
Sbjct: 270 VVVLGDAGSGKTTLLHALSGSV 291
>SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1913
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 415 DLRVMPGEFSDSEILVLLGENGTGKTTFIRMLAGNLEPDDGSGQLPQLH-ISYKPQKISP 591
++ ++ G+F D ++ G+T++ ++ PDD SG L ++ + KP+K +P
Sbjct: 949 EVEIVGGDF-DRANPNMMQLKSDGETSYADIIPDGKNPDDSSGPLGDVYAVVNKPKKSAP 1007
>SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 2065
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 442 SDSEILVLLGENGTGKTTFIRMLA 513
+ E ++L+GE GTGKT+ ++ LA
Sbjct: 445 NQQEPVLLVGETGTGKTSSVQTLA 468
>SB_36388| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 27.5 bits (58), Expect = 8.6
Identities = 29/122 (23%), Positives = 45/122 (36%), Gaps = 3/122 (2%)
Frame = +1
Query: 1 QRFACAMVCIQNADIFMFDEPSSYLDV---KQRLNAARTIRSLINPDKFIIVVEHDLSVL 171
QR A NAD+++ D+P S +D K + R + K ++V H +S L
Sbjct: 677 QRVNLARAVYFNADVYLLDDPLSAVDSHVGKHIFDKVIGPRGKLR-KKTRVLVTHGISFL 735
Query: 172 DYLSDFICCLYGVPGAYGVVTMPFSVREGINIFLDGFVPTENMRFRTESLVFKVAESATE 351
+ + G G + R FL F P E ++ KV E
Sbjct: 736 PQVDQIVVLQDGRVSEVGTYKELLANRGAFAEFLKTFAPEE----KSGDAALKVLREVPE 791
Query: 352 EE 357
+E
Sbjct: 792 DE 793
>SB_33973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1184
Score = 27.5 bits (58), Expect = 8.6
Identities = 23/82 (28%), Positives = 38/82 (46%)
Frame = +1
Query: 4 RFACAMVCIQNADIFMFDEPSSYLDVKQRLNAARTIRSLINPDKFIIVVEHDLSVLDYLS 183
R + A AD+++ D+P LDV ++AR R + P I + E D+ V+ +S
Sbjct: 543 RVSLARAVYAKADVYLLDDPLRSLDVNVAEDSAR--RPVQQPTG-IFIDEEDI-VIGNIS 598
Query: 184 DFICCLYGVPGAYGVVTMPFSV 249
I Y G G+ + +V
Sbjct: 599 WGIYLRYLTAGVTGIALLLMAV 620
>SB_23377| Best HMM Match : WH1 (HMM E-Value=2.8)
Length = 355
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +1
Query: 307 RTESLVFKVAESATEEEIKRMNHYEYPEMSKHMGDFDLRVMP--GEF--SDSEILVLLGE 474
R E+ K+ + E ++ N+Y PE+ G + L V+P GE+ S + E
Sbjct: 148 RCEAPALKITRWEEDSEKRQGNNYNMPEVLASGGPYPLVVLPVGGEYWLEGSNHQYAVQE 207
Query: 475 NGTGKT 492
NG +T
Sbjct: 208 NGMPRT 213
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,127,922
Number of Sequences: 59808
Number of extensions: 346562
Number of successful extensions: 1057
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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