Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_K18
         (378 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L06498-1|AAA60286.1|  119|Homo sapiens ribosomal protein S20 pro...   198   5e-51
BC087850-1|AAH87850.1|  119|Homo sapiens ribosomal protein S20 p...   198   5e-51
BC007507-1|AAH07507.1|  119|Homo sapiens ribosomal protein S20 p...   198   5e-51
AB061842-1|BAB79480.1|  119|Homo sapiens ribosomal protein S20 p...   198   5e-51
AB007156-1|BAA25820.1|   60|Homo sapiens ribosomal protein S20 p...   126   2e-29
M16276-1|AAA59823.1|  269|Homo sapiens HLA-DRB2 protein.               29   5.0  
AY663414-1|AAU88032.1|  261|Homo sapiens MHC class II antigen pr...    29   5.0  
AY375869-1|AAQ88043.1|  234|Homo sapiens MHC class II antigen pr...    29   5.0  
AY375868-1|AAQ88042.1|  234|Homo sapiens MHC class II antigen pr...    29   5.0  
AF000447-1|AAB86436.1|  255|Homo sapiens MHC class II HLA-DQB1 p...    29   5.0  
M60052-1|AAA88071.1|  699|Homo sapiens histidine-rich calcium bi...    29   6.6  
BC112355-1|AAI12356.1|  699|Homo sapiens histidine-rich calcium-...    29   6.6  
BC094691-1|AAH94691.1|  699|Homo sapiens histidine rich calcium ...    29   6.6  
BC069802-1|AAH69802.1|  699|Homo sapiens histidine rich calcium ...    29   6.6  
BC069795-1|AAH69795.1|  699|Homo sapiens histidine rich calcium ...    29   6.6  
AK129876-1|BAC85246.1|  480|Homo sapiens protein ( Homo sapiens ...    29   6.6  
BC007717-1|AAH07717.1|  286|Homo sapiens ZNF324 protein protein.       28   8.8  
AF060503-1|AAC33716.1|  553|Homo sapiens zinc finger protein pro...    28   8.8  
AB051506-1|BAB21810.2| 1050|Homo sapiens KIAA1719 protein protein.     28   8.8  

>L06498-1|AAA60286.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score =  198 bits (483), Expect = 5e-51
 Identities = 93/103 (90%), Positives = 100/103 (97%)
 Frame = +3

Query: 15  IHRIRITLTSRNVRSLEKVCSDLINGAKKQKLRVKGPVRMPTKVLRITTRKTPCGEGSKT 194
           IHRIRITLTSRNV+SLEKVC+DLI GAK++ L+VKGPVRMPTK LRITTRKTPCGEGSKT
Sbjct: 17  IHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKT 76

Query: 195 WDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 323
           WDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 77  WDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119


>BC087850-1|AAH87850.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score =  198 bits (483), Expect = 5e-51
 Identities = 93/103 (90%), Positives = 100/103 (97%)
 Frame = +3

Query: 15  IHRIRITLTSRNVRSLEKVCSDLINGAKKQKLRVKGPVRMPTKVLRITTRKTPCGEGSKT 194
           IHRIRITLTSRNV+SLEKVC+DLI GAK++ L+VKGPVRMPTK LRITTRKTPCGEGSKT
Sbjct: 17  IHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKT 76

Query: 195 WDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 323
           WDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 77  WDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119


>BC007507-1|AAH07507.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score =  198 bits (483), Expect = 5e-51
 Identities = 93/103 (90%), Positives = 100/103 (97%)
 Frame = +3

Query: 15  IHRIRITLTSRNVRSLEKVCSDLINGAKKQKLRVKGPVRMPTKVLRITTRKTPCGEGSKT 194
           IHRIRITLTSRNV+SLEKVC+DLI GAK++ L+VKGPVRMPTK LRITTRKTPCGEGSKT
Sbjct: 17  IHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKT 76

Query: 195 WDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 323
           WDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 77  WDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119


>AB061842-1|BAB79480.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score =  198 bits (483), Expect = 5e-51
 Identities = 93/103 (90%), Positives = 100/103 (97%)
 Frame = +3

Query: 15  IHRIRITLTSRNVRSLEKVCSDLINGAKKQKLRVKGPVRMPTKVLRITTRKTPCGEGSKT 194
           IHRIRITLTSRNV+SLEKVC+DLI GAK++ L+VKGPVRMPTK LRITTRKTPCGEGSKT
Sbjct: 17  IHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKT 76

Query: 195 WDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 323
           WDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 77  WDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119


>AB007156-1|BAA25820.1|   60|Homo sapiens ribosomal protein S20
           protein.
          Length = 60

 Score =  126 bits (304), Expect = 2e-29
 Identities = 57/60 (95%), Positives = 59/60 (98%)
 Frame = +3

Query: 117 KGPVRMPTKVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGV 296
           KGPVRMPTK LRITTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGV
Sbjct: 1   KGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGV 60


>M16276-1|AAA59823.1|  269|Homo sapiens HLA-DRB2 protein.
          Length = 269

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +3

Query: 99  KQKLRVKGPVRMPTKVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQIT 272
           K+ LR+ G +R PT  L +    TP  EG    + F ++  K +    + +E V+ +T
Sbjct: 4   KKALRIPGGLRAPTVTLMLAMLSTPVAEGRDPPEDFVLQF-KAMCYFTNGTERVRYVT 60


>AY663414-1|AAU88032.1|  261|Homo sapiens MHC class II antigen
           protein.
          Length = 261

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +3

Query: 99  KQKLRVKGPVRMPTKVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQIT 272
           K+ LR+ G +R PT  L +    TP  EG    + F ++  K +    + +E V+ +T
Sbjct: 4   KKALRIPGGLRAPTVTLMLAMLSTPVAEGRDPPEDFVLQF-KAMCYFTNGTERVRYVT 60


>AY375869-1|AAQ88043.1|  234|Homo sapiens MHC class II antigen
           protein.
          Length = 234

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +3

Query: 99  KQKLRVKGPVRMPTKVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQIT 272
           K+ LR+ G +R PT  L +    TP  EG    + F ++  K +    + +E V+ +T
Sbjct: 4   KKALRIPGGLRAPTVTLMLAMLSTPVAEGRDPPEDFVLQF-KAMCYFTNGTERVRYVT 60


>AY375868-1|AAQ88042.1|  234|Homo sapiens MHC class II antigen
           protein.
          Length = 234

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +3

Query: 99  KQKLRVKGPVRMPTKVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQIT 272
           K+ LR+ G +R PT  L +    TP  EG    + F ++  K +    + +E V+ +T
Sbjct: 4   KKALRIPGGLRAPTVTLMLAMLSTPVAEGRDPPEDFVLQF-KAMCYFTNGTERVRYVT 60


>AF000447-1|AAB86436.1|  255|Homo sapiens MHC class II HLA-DQB1
           protein.
          Length = 255

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +3

Query: 99  KQKLRVKGPVRMPTKVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQIT 272
           K+ LR+ G +R PT  L +    TP  EG    + F ++  K +    + +E V+ +T
Sbjct: 1   KKALRIPGGLRAPTVTLMLAMLSTPVAEGRDPPEDFVLQF-KAMCYFTNGTERVRYVT 57


>M60052-1|AAA88071.1|  699|Homo sapiens histidine-rich calcium
           binding protein protein.
          Length = 699

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -2

Query: 170 CFTC-CDAENLGRHSDWTLYTEFLFL 96
           C +C CD EN+G H D   + +F +L
Sbjct: 639 CESCHCDEENMGEHCDQCQHCQFCYL 664


>BC112355-1|AAI12356.1|  699|Homo sapiens histidine-rich
           calcium-binding protein, precursor protein.
          Length = 699

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -2

Query: 170 CFTC-CDAENLGRHSDWTLYTEFLFL 96
           C +C CD EN+G H D   + +F +L
Sbjct: 639 CESCHCDEENMGEHCDQCQHCQFCYL 664


>BC094691-1|AAH94691.1|  699|Homo sapiens histidine rich calcium
           binding protein protein.
          Length = 699

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -2

Query: 170 CFTC-CDAENLGRHSDWTLYTEFLFL 96
           C +C CD EN+G H D   + +F +L
Sbjct: 639 CESCHCDEENMGEHCDQCQHCQFCYL 664


>BC069802-1|AAH69802.1|  699|Homo sapiens histidine rich calcium
           binding protein protein.
          Length = 699

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -2

Query: 170 CFTC-CDAENLGRHSDWTLYTEFLFL 96
           C +C CD EN+G H D   + +F +L
Sbjct: 639 CESCHCDEENMGEHCDQCQHCQFCYL 664


>BC069795-1|AAH69795.1|  699|Homo sapiens histidine rich calcium
           binding protein protein.
          Length = 699

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -2

Query: 170 CFTC-CDAENLGRHSDWTLYTEFLFL 96
           C +C CD EN+G H D   + +F +L
Sbjct: 639 CESCHCDEENMGEHCDQCQHCQFCYL 664


>AK129876-1|BAC85246.1|  480|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26366 fis, clone HRT05814. ).
          Length = 480

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -2

Query: 170 CFTC-CDAENLGRHSDWTLYTEFLFL 96
           C +C CD EN+G H D   + +F +L
Sbjct: 420 CESCHCDEENMGEHCDQCQHCQFCYL 445


>BC007717-1|AAH07717.1|  286|Homo sapiens ZNF324 protein protein.
          Length = 286

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 21/73 (28%), Positives = 32/73 (43%)
 Frame = -3

Query: 247 GECRSITRLWMRIWNLSQVLEPSPQGVLRVVMRRTLVGIRTGPFTRSFCFLAPLMRSEQT 68
           G C S+  L  R    S   E  P GV  +   R L+G  +G  + S    +PL   E  
Sbjct: 114 GACHSVKSL-QRQRGASPSRERKPTGVSVIYWERLLLGSGSGQASVSLRLTSPLRPPEGV 172

Query: 67  FSSERTLRDVSVI 29
              E+TL + +++
Sbjct: 173 RLREKTLTEHALL 185


>AF060503-1|AAC33716.1|  553|Homo sapiens zinc finger protein
           protein.
          Length = 553

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 21/73 (28%), Positives = 32/73 (43%)
 Frame = -3

Query: 247 GECRSITRLWMRIWNLSQVLEPSPQGVLRVVMRRTLVGIRTGPFTRSFCFLAPLMRSEQT 68
           G C S+  L  R    S   E  P GV  +   R L+G  +G  + S    +PL   E  
Sbjct: 114 GACHSVKSL-QRQRGASPSRERKPTGVSVIYWERLLLGSGSGQASVSLRLTSPLRPPEGV 172

Query: 67  FSSERTLRDVSVI 29
              E+TL + +++
Sbjct: 173 RLREKTLTEHALL 185


>AB051506-1|BAB21810.2| 1050|Homo sapiens KIAA1719 protein protein.
          Length = 1050

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = -1

Query: 258 RSQKVSVDRSHACGCASGICPKSWNPHRKVFYVL*CGEPWSAFGLDPLHGVFVS 97
           R Q+    +S     +S + P     H +   V+ CG+P S FGL    G+F +
Sbjct: 432 RRQRRREHKSSLSLASSTVGPGGQIVHTETTEVVLCGDPLSGFGLQLQGGIFAT 485


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,246,062
Number of Sequences: 237096
Number of extensions: 1276240
Number of successful extensions: 2800
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2800
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2536788584
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)