Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_K17
         (578 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0B7B2 Cluster: Glycosyl transferase, group 1; n=1; Met...    33   3.7  
UniRef50_A7Q6T3 Cluster: Chromosome chr12 scaffold_57, whole gen...    32   8.5  
UniRef50_A7EZ97 Cluster: Putative uncharacterized protein; n=1; ...    32   8.5  

>UniRef50_A0B7B2 Cluster: Glycosyl transferase, group 1; n=1;
           Methanosaeta thermophila PT|Rep: Glycosyl transferase,
           group 1 - Methanosaeta thermophila (strain DSM 6194 /
           PT) (Methanothrixthermophila (strain DSM 6194 / PT))
          Length = 408

 Score = 33.5 bits (73), Expect = 3.7
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +3

Query: 384 WFVMKLDSCFYSITKSLHKPMKYESVSLSKFNLK 485
           W V+K D  F+SITKS+H  +    V +S+ +LK
Sbjct: 66  WDVIKGDERFFSITKSIHNALHGSDVQISEEDLK 99


>UniRef50_A7Q6T3 Cluster: Chromosome chr12 scaffold_57, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr12 scaffold_57, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 102

 Score = 32.3 bits (70), Expect = 8.5
 Identities = 18/59 (30%), Positives = 30/59 (50%)
 Frame = -2

Query: 517 TKQRQMFMVTSFRLNLLKETLSYFIGLCKDLVIL*KHESNFITNQSFSLQFMVKRSTDN 341
           TK    F VT++  NLL   + YF+ L K+ ++L K    ++  + F   F++K    N
Sbjct: 7   TKASVGFKVTNYT-NLLDYAIKYFLYLFKNFLLLCKQREKWLLRKLFLFLFLIKLLLSN 64


>UniRef50_A7EZ97 Cluster: Putative uncharacterized protein; n=1;
           Sclerotinia sclerotiorum 1980|Rep: Putative
           uncharacterized protein - Sclerotinia sclerotiorum 1980
          Length = 648

 Score = 32.3 bits (70), Expect = 8.5
 Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +2

Query: 23  HHLIRLLKFPPKQRA-SP*PF*PLRSERRVTVQTAHIMHGIKYPGDVTDPCLTP 181
           H    L  F P++RA SP P       RR+   +A+   GIKYP  +TDP   P
Sbjct: 149 HSSASLDAFNPRRRATSPIPLASRPDSRRIV--SANRGRGIKYPTAITDPYFNP 200


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,166,327
Number of Sequences: 1657284
Number of extensions: 9597138
Number of successful extensions: 22548
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22529
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)