Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_K17
         (578 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.61 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.3  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   7.6  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   7.6  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   7.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.61
 Identities = 10/40 (25%), Positives = 12/40 (30%)
 Frame = +1

Query: 19   TPPPNPSAQVPPEXXXXXXXXXXXXXXXEGDSTNRPYNAW 138
            T PP P    PP+                 D T +P   W
Sbjct: 1004 TKPPEPVTPAPPQVTTGVDTGASSTEHMHPDWTTKPSTWW 1043



 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 116  QTAHIMHGIKYPGDVTD 166
            QT H+     YPGDV D
Sbjct: 2522 QTGHVAPLYYYPGDVYD 2538


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = +2

Query: 98   ERRVTVQTAHIMHGIKYPGDVTDPCLTPLSSLNPIRSTP 214
            + ++T  +  I+HG+K   + +   L   S  + +R+TP
Sbjct: 1153 DTKITAASETILHGLKKYTNYSMEVLAYTSGGDGVRTTP 1191


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +3

Query: 375 LKLWFVMKL 401
           LKLWFV++L
Sbjct: 358 LKLWFVLRL 366


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 203 ELGLEKIKVLDKDLLHLQD 147
           ELG+  ++ +   L HLQD
Sbjct: 133 ELGISVVQKVSHTLYHLQD 151


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
          protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 1  LSCISQTPPP 30
          +SC+  TPPP
Sbjct: 31 ISCLKTTPPP 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,742
Number of Sequences: 336
Number of extensions: 2595
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)