Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_K16
(575 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF038609-3|AAU87825.1| 193|Caenorhabditis elegans Hypothetical ... 176 1e-44
AL032654-5|CAD91715.2| 516|Caenorhabditis elegans Hypothetical ... 30 1.0
AL032654-4|CAA21721.2| 552|Caenorhabditis elegans Hypothetical ... 30 1.0
AL117204-44|CAN86917.1| 148|Caenorhabditis elegans Hypothetical... 29 3.1
AL117204-43|CAB55131.2| 917|Caenorhabditis elegans Hypothetical... 29 3.1
AF043697-4|AAO38636.1| 431|Caenorhabditis elegans Hypothetical ... 29 3.1
AF043697-3|AAB97558.1| 548|Caenorhabditis elegans Hypothetical ... 29 3.1
AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical... 28 4.1
AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical ... 28 4.1
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 27 9.5
>AF038609-3|AAU87825.1| 193|Caenorhabditis elegans Hypothetical
protein C54E4.5 protein.
Length = 193
Score = 176 bits (428), Expect = 1e-44
Identities = 74/135 (54%), Positives = 95/135 (70%)
Frame = +2
Query: 2 NHFKSTIKDALIKLNDLVDESDPDTNLPNIVHAFQTAERIREDHPDDDWFHLIGLIHDLG 181
+H K I L L +DESDPD + N++HA+QTAE+IRE+HPD W HL GLIHDLG
Sbjct: 58 DHAKMPILGCLDMLATFLDESDPDVDEANLIHAYQTAEKIRENHPDKPWMHLAGLIHDLG 117
Query: 182 KVMAFYEEPQWCVVGDTFAVGCKWGKSIVYGDDSFKDNPDTYNPKYNTEYGMYEPNCGLE 361
K+M+ + E QW V GDT+ VGC SIVYG SF NPD +P Y T+ GMY+ CG+E
Sbjct: 118 KIMSVWGEEQWAVTGDTYPVGCAPAASIVYGKSSFDGNPDISHPVYGTQMGMYQEKCGME 177
Query: 362 NLMVSWGHDEYLYRV 406
NL+++W HDEY+Y+V
Sbjct: 178 NLLMTWSHDEYMYKV 192
>AL032654-5|CAD91715.2| 516|Caenorhabditis elegans Hypothetical
protein Y52B11A.3b protein.
Length = 516
Score = 30.3 bits (65), Expect = 1.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 113 ERIREDHPDDDWFHLIGLIHDLGKVMAFY 199
E ++ + DD W HL G+++D+ K + F+
Sbjct: 25 ELMKHNTKDDCWVHLFGIVYDVTKYLDFH 53
>AL032654-4|CAA21721.2| 552|Caenorhabditis elegans Hypothetical
protein Y52B11A.3a protein.
Length = 552
Score = 30.3 bits (65), Expect = 1.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 113 ERIREDHPDDDWFHLIGLIHDLGKVMAFY 199
E ++ + DD W HL G+++D+ K + F+
Sbjct: 61 ELMKHNTKDDCWVHLFGIVYDVTKYLDFH 89
>AL117204-44|CAN86917.1| 148|Caenorhabditis elegans Hypothetical
protein Y116A8C.26b protein.
Length = 148
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 336 CTSPTVDSRI*WYLGDTTSTYTGFWCTT 419
C SP +D + LG+ T Y GFW T
Sbjct: 92 CNSPQLDLVLEQILGNITRDYVGFWYKT 119
>AL117204-43|CAB55131.2| 917|Caenorhabditis elegans Hypothetical
protein Y116A8C.26a protein.
Length = 917
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 336 CTSPTVDSRI*WYLGDTTSTYTGFWCTT 419
C SP +D + LG+ T Y GFW T
Sbjct: 92 CNSPQLDLVLEQILGNITRDYVGFWYKT 119
>AF043697-4|AAO38636.1| 431|Caenorhabditis elegans Hypothetical
protein F56C11.6b protein.
Length = 431
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 317 YNTEYGMYEPNCGLENLMVSWGHDEYLYRVLVHNKSKF 430
Y+ YG Y L N+M HD Y Y+ HN + F
Sbjct: 286 YSINYGTYR----LANIMTDLQHDVYFYQFDYHNSAGF 319
>AF043697-3|AAB97558.1| 548|Caenorhabditis elegans Hypothetical
protein F56C11.6a protein.
Length = 548
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 317 YNTEYGMYEPNCGLENLMVSWGHDEYLYRVLVHNKSKF 430
Y+ YG Y L N+M HD Y Y+ HN + F
Sbjct: 403 YSINYGTYR----LANIMTDLQHDVYFYQFDYHNSAGF 436
>AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical
protein Y18D10A.13 protein.
Length = 2417
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -2
Query: 232 CVTDHAPLRLLVEGHNLSEIVNESNEVEPIIVR-MVLTDPLRCLESVHNVRQVSV 71
C RLLVE H+ + S++VE I+V+ + TD L C E+ ++ V
Sbjct: 797 CTEQQRLARLLVELHSRRPL-EASSDVESIVVQSLTSTDDLVCSEAARTFHRIWV 850
>AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical
protein protein.
Length = 2417
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -2
Query: 232 CVTDHAPLRLLVEGHNLSEIVNESNEVEPIIVR-MVLTDPLRCLESVHNVRQVSV 71
C RLLVE H+ + S++VE I+V+ + TD L C E+ ++ V
Sbjct: 797 CTEQQRLARLLVELHSRRPL-EASSDVESIVVQSLTSTDDLVCSEAARTFHRIWV 850
>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +2
Query: 101 FQTAERIREDHPDDDWFHL----IGLIHDLGKVMAFYEEPQWCVVGDTFAV 241
F++ R RED D DW L I +I D K + + +P++C + A+
Sbjct: 1602 FESPRRCREDQKDIDWSQLGHKPIEIIRDQIKSLLGF-KPRFCTTNNDLAL 1651
>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +2
Query: 101 FQTAERIREDHPDDDWFHL----IGLIHDLGKVMAFYEEPQWCVVGDTFAV 241
F++ R RED D DW L I +I D K + + +P++C + A+
Sbjct: 1599 FESPRRCREDQKDIDWSQLGHKPIEIIRDQIKSLLGF-KPRFCTTNNDLAL 1648
>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +2
Query: 101 FQTAERIREDHPDDDWFHL----IGLIHDLGKVMAFYEEPQWCVVGDTFAV 241
F++ R RED D DW L I +I D K + + +P++C + A+
Sbjct: 1602 FESPRRCREDQKDIDWSQLGHKPIEIIRDQIKSLLGF-KPRFCTTNNDLAL 1651
>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +2
Query: 101 FQTAERIREDHPDDDWFHL----IGLIHDLGKVMAFYEEPQWCVVGDTFAV 241
F++ R RED D DW L I +I D K + + +P++C + A+
Sbjct: 1599 FESPRRCREDQKDIDWSQLGHKPIEIIRDQIKSLLGF-KPRFCTTNNDLAL 1648
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,499,106
Number of Sequences: 27780
Number of extensions: 290439
Number of successful extensions: 856
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -