Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_K16
         (575 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g14520.1 68414.m01721 oxygenase-related similar to myo-inosit...   224   3e-59
At5g56640.1 68418.m07071 expressed protein similar to myo-inosit...   213   5e-56
At4g26260.1 68417.m03779 expressed protein similar to myo-inosit...   211   2e-55
At2g19800.1 68415.m02313 expressed protein similar to myo-inosit...   211   3e-55
At5g66770.1 68418.m08416 scarecrow transcription factor family p...    28   5.1  
At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearl...    27   6.8  
At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearl...    27   6.8  
At5g48040.1 68418.m05936 hypothetical protein                          27   9.0  
At5g12070.1 68418.m01412 self-incompatibility protein-related si...    27   9.0  
At1g09600.1 68414.m01077 protein kinase family protein contains ...    27   9.0  

>At1g14520.1 68414.m01721 oxygenase-related similar to myo-inositol
           oxygenase [Sus scrofa] gi|17432544|gb|AAL39076
          Length = 311

 Score =  224 bits (548), Expect = 3e-59
 Identities = 101/194 (52%), Positives = 134/194 (69%), Gaps = 3/194 (1%)
 Frame = +2

Query: 2   NHFKSTIKDALIKLNDLVDESDPDTNLPNIVHAFQTAERIREDHPDDDWFHLIGLIHDLG 181
           N  + +I +    LN+ +DESDPD + P I H  QTAE IR+D+PD+DW HL GLIHDLG
Sbjct: 91  NRTEMSIWECCELLNEFIDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLG 150

Query: 182 KVM---AFYEEPQWCVVGDTFAVGCKWGKSIVYGDDSFKDNPDTYNPKYNTEYGMYEPNC 352
           KV+   +F E PQW VVGDTF VGC + +SIV+    FK+NPD  NP YN++YG+Y   C
Sbjct: 151 KVLLHSSFGELPQWAVVGDTFPVGCAFDESIVH-HKYFKENPDYDNPSYNSKYGIYTEGC 209

Query: 353 GLENLMVSWGHDEYLYRVLVHNKSKFPKKGLYMIRFHSFYPWHAGGDYKHLLKEGDEEIK 532
           GL+N+++SWGHD+Y+Y V   N++  P  GL++IR+HSFY  H    YKHL+   D E  
Sbjct: 210 GLDNVLMSWGHDDYMYLVAKENQTTLPSAGLFIIRYHSFYALHKSEAYKHLMNNEDRENM 269

Query: 533 KAVLEFNQYDLYTK 574
           K +  FN+YDLY+K
Sbjct: 270 KWLKVFNKYDLYSK 283


>At5g56640.1 68418.m07071 expressed protein similar to myo-inositol
           oxygenase [Sus scrofa] gi|17432544|gb|AAL39076
          Length = 314

 Score =  213 bits (521), Expect = 5e-56
 Identities = 97/179 (54%), Positives = 125/179 (69%), Gaps = 3/179 (1%)
 Frame = +2

Query: 47  DLVDESDPDTNLPNIVHAFQTAERIREDHPDDDWFHLIGLIHDLGKVMA---FYEEPQWC 217
           ++VDESDPD + P I H  Q+AE IR+D+P++DW HL  LIHDLGKV+    F   PQW 
Sbjct: 109 EVVDESDPDLDEPQIQHLLQSAEAIRKDYPNEDWLHLTALIHDLGKVLTLPQFGGLPQWA 168

Query: 218 VVGDTFAVGCKWGKSIVYGDDSFKDNPDTYNPKYNTEYGMYEPNCGLENLMVSWGHDEYL 397
           VVGDTF VGC + +S V+    F +NPD  NPKYNT+ G+Y   CGLEN+++SWGHD+Y+
Sbjct: 169 VVGDTFPVGCAFDESNVH-HKYFMENPDFNNPKYNTKAGIYSEGCGLENVLMSWGHDDYM 227

Query: 398 YRVLVHNKSKFPKKGLYMIRFHSFYPWHAGGDYKHLLKEGDEEIKKAVLEFNQYDLYTK 574
           Y V   N S  P  GL++IR+HSFYP H  G Y HL+ E D+E  K +  FN+YDLY+K
Sbjct: 228 YLVAKENGSTLPSPGLFIIRYHSFYPLHKAGAYTHLMNEEDKENLKWLHVFNKYDLYSK 286


>At4g26260.1 68417.m03779 expressed protein similar to myo-inositol
           oxygenase [Sus scrofa] gi|17432544|gb|AAL39076
          Length = 317

 Score =  211 bits (516), Expect = 2e-55
 Identities = 96/181 (53%), Positives = 125/181 (69%), Gaps = 3/181 (1%)
 Frame = +2

Query: 41  LNDLVDESDPDTNLPNIVHAFQTAERIREDHPDDDWFHLIGLIHDLGKVMA---FYEEPQ 211
           LN++VDESDPD + P I H  Q+AE IR+D+P++DW HL  LIHDLGKV+    F   PQ
Sbjct: 110 LNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPNEDWLHLTALIHDLGKVITLPQFGGLPQ 169

Query: 212 WCVVGDTFAVGCKWGKSIVYGDDSFKDNPDTYNPKYNTEYGMYEPNCGLENLMVSWGHDE 391
           W VVGDTF VGC + +S V+    F +NPD +N  YNT+ G+Y   CGL N+M+SWGHD+
Sbjct: 170 WAVVGDTFPVGCAFDESNVH-HKYFVENPDFHNETYNTKNGIYSEGCGLNNVMMSWGHDD 228

Query: 392 YLYRVLVHNKSKFPKKGLYMIRFHSFYPWHAGGDYKHLLKEGDEEIKKAVLEFNQYDLYT 571
           Y+Y V   N S  P  G ++IR+HSFYP H  G+Y HL+ E D+E  K +  FN+YDLY+
Sbjct: 229 YMYLVAKENGSTLPSAGQFIIRYHSFYPLHTAGEYTHLMNEEDKENLKWLHVFNKYDLYS 288

Query: 572 K 574
           K
Sbjct: 289 K 289


>At2g19800.1 68415.m02313 expressed protein similar to myo-inositol
           oxygenase [Sus scrofa] gi|17432544|gb|AAL39076
          Length = 317

 Score =  211 bits (515), Expect = 3e-55
 Identities = 97/194 (50%), Positives = 128/194 (65%), Gaps = 3/194 (1%)
 Frame = +2

Query: 2   NHFKSTIKDALIKLNDLVDESDPDTNLPNIVHAFQTAERIREDHPDDDWFHLIGLIHDLG 181
           N  + +I +    LN++VDESDPD + P I H  QTAE IR D+PD+DW HL  LIHDLG
Sbjct: 97  NKMEMSIWECCELLNNVVDESDPDLDEPQIQHLLQTAEAIRRDYPDEDWLHLTALIHDLG 156

Query: 182 KVMAFYEE---PQWCVVGDTFAVGCKWGKSIVYGDDSFKDNPDTYNPKYNTEYGMYEPNC 352
           KV+   E    PQW VVGDTF VGC +  + ++    FK N D  NPKYNT+ G+Y   C
Sbjct: 157 KVLLLPEFGGLPQWAVVGDTFPVGCTFDSANIH-HKYFKGNHDINNPKYNTKNGVYTEGC 215

Query: 353 GLENLMVSWGHDEYLYRVLVHNKSKFPKKGLYMIRFHSFYPWHAGGDYKHLLKEGDEEIK 532
           GL+N+++SWGHD+Y+Y V   N +  P  GL++IR+HSFYP H  G Y HL+ + D +  
Sbjct: 216 GLDNVLMSWGHDDYMYLVAKKNGTTLPHAGLFIIRYHSFYPLHKAGAYTHLMNDEDRDDL 275

Query: 533 KAVLEFNQYDLYTK 574
           K +  FN+YDLY+K
Sbjct: 276 KWLHVFNKYDLYSK 289


>At5g66770.1 68418.m08416 scarecrow transcription factor family
           protein
          Length = 584

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 248 KWGKSIVYGDDSFKDNPDTYNPKYNTEYGMYEPN 349
           +W ++++ G DS  D PD      N +Y +Y P+
Sbjct: 115 EWMETLISGGDSVADGPDCDTWHDNPDYVIYGPD 148


>At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearly
            identical to ubiquitin-protein ligase 2 [Arabidopsis
            thaliana] GI:7108523; E3, HECT-domain protein family;
            similar to ubiquitin-protein ligase 2 GI:7108523 from
            [Arabidopsis thaliana]
          Length = 3658

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +1

Query: 373  ILGTRRVPIQGFGA-QQIKVPQKRSLH 450
            + GT +VP++GF A Q I  PQ+  +H
Sbjct: 3584 VTGTSKVPLEGFKALQGISGPQRLQIH 3610


>At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearly
            identical to ubiquitin-protein ligase 1 [Arabidopsis
            thaliana] GI:7108521; E3, HECT-domain protein family;
            similar to GI:7108521, GB:AAF36454 from [Arabidopsis
            thaliana]
          Length = 3891

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +1

Query: 373  ILGTRRVPIQGFGA-QQIKVPQKRSLH 450
            + GT +VP++GF A Q I  PQ+  +H
Sbjct: 3817 VTGTSKVPLEGFKALQGISGPQRLQIH 3843


>At5g48040.1 68418.m05936 hypothetical protein
          Length = 422

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 338 YEPNCGLENLMVSWGHDEYLYRVLVHNK 421
           Y+  CGL N+ + W  D  L  V+V  K
Sbjct: 26  YQQRCGLVNVKLKWVKDRELDAVVVREK 53


>At5g12070.1 68418.m01412 self-incompatibility protein-related
           similar to self-incompatibility [Papaver nudicaule]
           GI:3097262, S3 self-incompatibility protein [Papaver
           rhoeas] GI:1107841
          Length = 149

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = +3

Query: 120 SVRTILTMIGSTS---LDSFTISERLWPSTRSRNGAWSVTHSPSDVNGVNLLFTETT 281
           SV TI   +G  S   L   +  + L     + NG+WS    PS V GV L F   T
Sbjct: 35  SVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFT 91


>At1g09600.1 68414.m01077 protein kinase family protein contains
           Pfam domain, PF00069: Protein kinase domain
          Length = 714

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
 Frame = +2

Query: 293 NPDTYNPKYNTEYGMYEPNCGLENLMVSWGHDEYLYRVLVHNKSKFPKKGLYMIRFHSFY 472
           NP  +   YN   G        + L+V   H E+       +K      G    R H   
Sbjct: 612 NPRWFEDSYNNNNGRQNGGAWSQRLVVK--HKEF-----TKHKESITVNGEKKERMHCSG 664

Query: 473 PW-HAGGDYKHLLKEGDEEIKKAV 541
           P   AGG+   +LKE + +I+ AV
Sbjct: 665 PLVSAGGNLDEMLKEHERQIQLAV 688


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,890,759
Number of Sequences: 28952
Number of extensions: 276480
Number of successful extensions: 802
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1121903184
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)