Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_K10
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   3.1  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   3.1  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   7.1  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   7.1  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   7.1  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.4  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 7/25 (28%), Positives = 11/25 (44%)
 Frame = +1

Query: 157 INKKQNTWKAGRNFPTHTPFAHIKI 231
           +N +  TW  GR      PF  + +
Sbjct: 129 VNSRPETWVLGREMCKAVPFVELTV 153


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 7/25 (28%), Positives = 11/25 (44%)
 Frame = +1

Query: 157 INKKQNTWKAGRNFPTHTPFAHIKI 231
           +N +  TW  GR      PF  + +
Sbjct: 129 VNSRPETWVLGREMCKAVPFVELTV 153


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -2

Query: 112 PQQREYTRARRTEHTKEPSFSILFSFTESI 23
           P   E + +    H+ E SFS   S+T +I
Sbjct: 194 PTCSEASSSPTPSHSSESSFSAASSYTNTI 223


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 524 PPLQPRPHIGQQ 489
           PP+Q +P+ GQQ
Sbjct: 208 PPIQQQPNQGQQ 219


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 524 PPLQPRPHIGQQ 489
           PP+Q +P+ GQQ
Sbjct: 210 PPIQQQPNQGQQ 221


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 186 SFPCVLFLIYQIYKR 142
           SF C+LF IY  +++
Sbjct: 14  SFCCILFFIYLYWQQ 28


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,238
Number of Sequences: 336
Number of extensions: 2682
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)