Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_K09
         (248 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   2.6  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    19   7.9  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    19   7.9  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    19   7.9  

>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 20.6 bits (41), Expect = 2.6
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = +1

Query: 19  MPFARYVEPGRVALVSDGPLKGKLVG--VVDIIDQTRALIDGPGSGVSRQQIRSTI 180
           M +A+ ++PG   LVSD   K  L+   +V +    R+ +  P +GV    +   +
Sbjct: 191 MKYAQKLQPGDFLLVSDN-AKNALISEKIVRLEAVWRSGVFAPLTGVGTLVVNDVV 245


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 19.0 bits (37), Expect = 7.9
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 39  RTRASRPGF*WTSKRK 86
           RT  S P F W  K+K
Sbjct: 316 RTLGSLPPFKWLFKKK 331


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 19.0 bits (37), Expect = 7.9
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +1

Query: 205 YPFYSTHTCCQK 240
           + FY  HT C K
Sbjct: 29  FGFYPHHTSCDK 40


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 19.0 bits (37), Expect = 7.9
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +1

Query: 205 YPFYSTHTCCQK 240
           + FY  HT C K
Sbjct: 29  FGFYPHHTSCDK 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,173
Number of Sequences: 336
Number of extensions: 917
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  3737755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)