Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_K07
         (589 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    49   4e-08
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    24   1.3  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   2.2  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    23   2.2  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   3.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   3.9  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   5.1  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   5.1  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    21   9.0  
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    21   9.0  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   9.0  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   9.0  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   9.0  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 48.8 bits (111), Expect = 4e-08
 Identities = 24/63 (38%), Positives = 43/63 (68%)
 Frame = +1

Query: 301 ESNNECCGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAA 480
           +S N  CG ++   ++IVGG +T I ++P +  I+  +++   ++CG ++IS +YVLTAA
Sbjct: 147 DSTNCNCGWKNP--SRIVGGTNTGINEFPMMAGIK-RTYEP-GMICGATIISKRYVLTAA 202

Query: 481 HCV 489
           HC+
Sbjct: 203 HCI 205


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 58  ISNACKTPDDKP 93
           ++NACK  DDKP
Sbjct: 392 LTNACKKKDDKP 403


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = -2

Query: 477 SSEHVLRTDE*ATA*QLHMIKTLIFDHHKPWILGDFCV-ISTDNFINN 337
           +S H+L   +  T+  L+ +    +DH K  ++G F +  S D+  NN
Sbjct: 24  NSVHILSKYQLITSTTLNWLPRTHYDHLKEIVIGGFEIEKSEDDSFNN 71


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -1

Query: 94  PVYRLESYKRLKW 56
           P YRLE  KRL W
Sbjct: 333 PKYRLELQKRLPW 345


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 146 IRPERVKWITFDNPF 190
           I PER ++I F  PF
Sbjct: 525 INPERAEFIEFSKPF 539


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 14/49 (28%), Positives = 20/49 (40%)
 Frame = -3

Query: 362  FPPTILLTTVSSTPQHSLLLSSGKAVTALEHLSLRVISSGFISGGGPQH 216
            F P +LL      P+   + SS        HL++ V+      G GP H
Sbjct: 883  FAPLLLLHLTPLQPRFYSISSSPDVHQGQIHLTVAVVQYKTQDGFGPIH 931


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 468 AHCCTLCHWSNLD 506
           AHC  LCH  + D
Sbjct: 741 AHCFALCHCCDFD 753


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = +1

Query: 121 EHITYMMLDKTRKSKMDYVRQSVCNGPETFSVCCGPPPEINP 246
           +H+ Y       +S   YV     +G + F+  C P P   P
Sbjct: 362 QHLHYRQPPTLSESYSSYVNSMYASGAQ-FATPCTPSPPRGP 402


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 563 GPLFVVLYSPKRTFFGVPSI 504
           GPLF  +Y+   + FG  SI
Sbjct: 121 GPLFCQIYAMLGSLFGCGSI 140


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 152

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 563 GPLFVVLYSPKRTFFGVPSI 504
           GPLF  +Y+   + FG  SI
Sbjct: 87  GPLFCQIYAMLGSLFGCGSI 106


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/27 (25%), Positives = 13/27 (48%)
 Frame = +1

Query: 112 YNCEHITYMMLDKTRKSKMDYVRQSVC 192
           Y C      ++DK ++++  Y R   C
Sbjct: 144 YACREEKSCIIDKRQRNRCQYCRYQKC 170


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/27 (25%), Positives = 13/27 (48%)
 Frame = +1

Query: 112 YNCEHITYMMLDKTRKSKMDYVRQSVC 192
           Y C      ++DK ++++  Y R   C
Sbjct: 144 YACREEKSCIIDKRQRNRCQYCRYQKC 170


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -3

Query: 407 YSITTSHGYWVIFVSFPPTILLTTVSSTPQHSLLLSSGKAVT 282
           Y   T+HGY +   S     +L    ST +  ++   GKA +
Sbjct: 795 YPSQTTHGYDIYASSIDKENILFLDLSTGKVEMITGVGKATS 836


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,276
Number of Sequences: 438
Number of extensions: 4254
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)