Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_K06
         (600 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_33220| Best HMM Match : TP2 (HMM E-Value=1.7)                       33   0.23 
SB_2556| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.8  
SB_19631| Best HMM Match : zf-CCHC (HMM E-Value=0.0088)                29   3.8  
SB_23052| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.0  
SB_17889| Best HMM Match : Patched (HMM E-Value=0.14)                  28   5.0  
SB_21845| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.6  
SB_607| Best HMM Match : No HMM Matches (HMM E-Value=.)                28   6.6  
SB_45900| Best HMM Match : Chordopox_A13L (HMM E-Value=7.4)            28   6.6  
SB_54699| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.8  
SB_32632| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.8  
SB_19180| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.8  
SB_4389| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   8.8  
SB_46145| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.8  
SB_28502| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.8  
SB_4325| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   8.8  

>SB_33220| Best HMM Match : TP2 (HMM E-Value=1.7)
          Length = 590

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -2

Query: 440 SSVHIESSGNVRVLVHIILIVTQHFSEHCHHMEH 339
           SS+   SS ++ ++ HII+I+T   + H HH  H
Sbjct: 394 SSLTSSSSPHLSIITHIIIIITPLANHHSHHHHH 427


>SB_2556| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 275

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -2

Query: 554 DTREIKFLASITRQHVFEKHERVHDAFHYLPE 459
           D+R  KF AS  R   FE H R+    HY P+
Sbjct: 2   DSRGSKFFASSFR--TFENHRRISSGRHYFPK 31


>SB_19631| Best HMM Match : zf-CCHC (HMM E-Value=0.0088)
          Length = 329

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 381 NQYNMDKYTYVPTALDMYTTCLRDPVFWKIM 473
           NQ NM ++  VPT  ++  TCL   +F  +M
Sbjct: 290 NQCNMSEHYRVPTRSEITKTCLEPNIFQNLM 320


>SB_23052| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 479

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 178 CF*MMLSR*SAKES*QAKSNVVMEP*SI*RNPKTWKCL 291
           C  ++L + +AKES +  +N   EP     N K W CL
Sbjct: 139 CKRVLLKKDNAKESMEGLTNACKEPLQEKANQKMWNCL 176


>SB_17889| Best HMM Match : Patched (HMM E-Value=0.14)
          Length = 925

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 16  IPLGCRNSARGEPVKNGYWHLISIGQADLRPMEMRC 123
           +P  CRN  +  P  +  WH + +   ++RP E  C
Sbjct: 793 MPPSCRNGFQATPTAHNAWHWLKV--QEVRPREHGC 826


>SB_21845| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 234

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -2

Query: 554 DTREIKFLASITRQHVFEKHERVHDAFHYLPE 459
           D+R  KFLA   R   FE H R+    HY P+
Sbjct: 2   DSRGSKFLAGSFR--TFENHRRISSDRHYFPK 31


>SB_607| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 77

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -2

Query: 554 DTREIKFLASITRQHVFEKHERVHDAFHYLPE 459
           D+R  KF AS  R   FE H R+    HY P+
Sbjct: 2   DSRGSKFFASSFR--TFENHRRISSDRHYFPK 31


>SB_45900| Best HMM Match : Chordopox_A13L (HMM E-Value=7.4)
          Length = 152

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -2

Query: 416 GNVRVLVHIILIVTQHFSEHCHHMEH-FGIVIGHIHATEDKSGKH 285
           G + + +  + IVT H  +H HH  H  G  +G  +    KS +H
Sbjct: 10  GVIIIAISTVAIVTGHLQQHHHHHFHQCGHYLGLNYPFVPKSSRH 54


>SB_54699| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 85

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 68  IGISSPLGRRILGQWR*DASSSK*F-CSGHE 157
           +G+ SPLG R +G W  +A +     C+GH+
Sbjct: 46  LGVFSPLGARYVGAWHRNARAHCPLPCTGHQ 76


>SB_32632| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 85

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 68  IGISSPLGRRILGQWR*DASSSK*F-CSGHE 157
           +G+ SPLG R +G W  +A +     C+GH+
Sbjct: 46  LGVFSPLGARYVGAWHRNARAHCPLPCTGHQ 76


>SB_19180| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 140

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 68  IGISSPLGRRILGQWR*DASSSK*F-CSGHE 157
           +G+ SPLG R +G W  +A +     C+GH+
Sbjct: 101 LGVFSPLGARYVGAWHRNARAHCPLPCTGHQ 131


>SB_4389| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 85

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 68  IGISSPLGRRILGQWR*DASSSK*F-CSGHE 157
           +G+ SPLG R +G W  +A +     C+GH+
Sbjct: 46  LGVFSPLGARYVGAWHRNARAHCPLPCTGHQ 76


>SB_46145| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 85

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 68  IGISSPLGRRILGQWR*DASSSK*F-CSGHE 157
           +G+ SPLG R +G W  +A +     C+GH+
Sbjct: 46  LGVFSPLGARYVGAWHRNARAHCPLPCTGHQ 76


>SB_28502| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 85

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 68  IGISSPLGRRILGQWR*DASSSK*F-CSGHE 157
           +G+ SPLG R +G W  +A +     C+GH+
Sbjct: 46  LGVFSPLGARYVGAWHRNARAHCPLPCTGHQ 76


>SB_4325| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 85

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 68  IGISSPLGRRILGQWR*DASSSK*F-CSGHE 157
           +G+ SPLG R +G W  +A +     C+GH+
Sbjct: 46  LGVFSPLGARYVGAWHRNARAHCPLPCTGHQ 76


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,389,388
Number of Sequences: 59808
Number of extensions: 407897
Number of successful extensions: 1206
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1451595000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)