Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_J24
         (551 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    53   1e-07
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    53   2e-07
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    52   4e-07
AF078157-9|AAG24075.3|  425|Caenorhabditis elegans Hypothetical ...    32   0.32 
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne...    31   0.55 
U23139-1|AAK31493.2|  513|Caenorhabditis elegans Hypothetical pr...    29   1.7  
Z48621-2|CAA88547.1|  536|Caenorhabditis elegans Hypothetical pr...    28   3.9  
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z68005-4|CAA91992.2|  430|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical pr...    27   9.0  
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    27   9.0  

>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
 Frame = +1

Query: 61  ITKEQLCAGG-KPGEDACRGDSGGPLMYE-VGNTFVMVGSVSYGPKYCGTRNIPGVYTNV 234
           +++   CAG  + G D+C+GDSGGP         FV+ G +S+G   C  +  PG+YT V
Sbjct: 191 MSRSAFCAGYLEGGIDSCQGDSGGPFACRREDGAFVLAGVISWGDG-CAQKKQPGIYTMV 249

Query: 235 YEYIPWIRSTI 267
             Y+ WI + I
Sbjct: 250 APYLSWISAII 260


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
 Frame = +1

Query: 76  LCAGGKPGE-DACRGDSGGPLMYEVGNTFVMVGSVSYGPKYCGTRNIPGVYTNVYEYIPW 252
           LCAG   G+ D+C+GDSGGPLM      + + G VS+G   C    +PGVY NV+    W
Sbjct: 225 LCAGYSYGKIDSCQGDSGGPLMCARDGHWELTGVVSWGIG-CARPGMPGVYGNVHSASTW 283

Query: 253 I 255
           I
Sbjct: 284 I 284


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 51.6 bits (118), Expect = 4e-07
 Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
 Frame = +1

Query: 61  ITKEQLCAGGKPGEDACRGDSGGPLMYEVGN-TFVMVGSVSYGPK----YCGTRNIPGVY 225
           IT  Q+CAG      A  GDSGGPL+    N  +V +G  SYG             PGVY
Sbjct: 210 ITGYQICAGAYLHGTA-PGDSGGPLLIHKSNGEYVQIGITSYGADGLDGVIDQGKFPGVY 268

Query: 226 TNVYEYIPWIRSTI 267
           T + +Y+PWI+  I
Sbjct: 269 TRISKYVPWIQGVI 282


>AF078157-9|AAG24075.3|  425|Caenorhabditis elegans Hypothetical
           protein F25E5.4 protein.
          Length = 425

 Score = 31.9 bits (69), Expect = 0.32
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 91  KPGEDACRGDSGGPLMYEVGNTFVMVGSVSYGPKYC 198
           K  +  C GD GG  +  + N F M+G  + G K C
Sbjct: 227 KQNQGLCSGDFGGSAVSRIDNRFTMLGFFAQGNKNC 262


>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
            neurexin-like protein 1 protein.
          Length = 1655

 Score = 31.1 bits (67), Expect = 0.55
 Identities = 16/33 (48%), Positives = 17/33 (51%)
 Frame = -1

Query: 173  DPTITKVLPTSYMRGPPESPLHASSPGLPPAHS 75
            DPT  K  P      PP SP+HAS P  PP  S
Sbjct: 1617 DPTAPKDSPLYSNIRPPTSPIHASVPVPPPRMS 1649


>U23139-1|AAK31493.2|  513|Caenorhabditis elegans Hypothetical
           protein F13H8.5 protein.
          Length = 513

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
 Frame = -1

Query: 200 PQYFGP*LTDPTITKVLPTSYMRGPPESPLHASS---PGLPPAHSCSLVITSASPP 42
           PQYF P        +  P  Y +  P+ PL       P  PP +S ++VI  A PP
Sbjct: 85  PQYFQP------QQQQQPVQYQQQQPQQPLQYQQQPQPAPPPIYSQTVVIPQAPPP 134


>Z48621-2|CAA88547.1|  536|Caenorhabditis elegans Hypothetical
           protein R07B1.3 protein.
          Length = 536

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = -1

Query: 233 TFVYTPGMFLVPQYFGP*LTDPTITKVLPTSYMRGPPESPLHASSPGLPP 84
           TF+  PG+F +  Y G     P    V P  ++  PPE   H S     P
Sbjct: 378 TFLLPPGIFPLVCYPGHNAQPPFTVLVSPPHFLYSPPEVQHHLSGMNPDP 427


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 106 ACRGDSGGPLMYEVGNTFVMVGSVSY 183
           AC GDSG P+   V    ++VG+V++
Sbjct: 209 ACMGDSGSPVYCFVNGKRILVGTVAH 234


>Z68005-4|CAA91992.2|  430|Caenorhabditis elegans Hypothetical
           protein F59F3.2 protein.
          Length = 430

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 79  CAGGKPGEDACRGDSGGP 132
           C  G PGED  RG++G P
Sbjct: 157 CPQGPPGEDGLRGEAGEP 174


>Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical
           protein F31D4.6 protein.
          Length = 292

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +1

Query: 109 CRGDSGGPLMYEVGN--TFVMVGSVSYGPKYCGTRNIPGVYTNVYEYI 246
           C GDSGG L Y   N     ++   S+G + C + N+   +T V  Y+
Sbjct: 235 CHGDSGGGLEYRDDNYGRAFLIAITSFGTRGCPS-NMLARFTRVDMYL 281


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = +1

Query: 70  EQLCAGGKPGEDACRGDSGGPLMYEVGNTF--VMVGSVSYG 186
           +  C   +  ++ C GDSGG L +   ++    ++  VSYG
Sbjct: 257 DSFCTAEEEDKNVCSGDSGGGLTFHQSDSAREFIIAIVSYG 297


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,684,700
Number of Sequences: 27780
Number of extensions: 270722
Number of successful extensions: 1024
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)