Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_J19
(324 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0107 - 20883353-20883627,20883739-20883801,20884608-208847... 73 5e-14
08_01_0417 - 3692247-3692329,3692442-3692504,3693233-3693350,369... 71 2e-13
06_01_0108 - 860080-860162,860276-860338,860857-860974,861481-86... 68 2e-12
04_04_1623 - 34846056-34846223,34846547-34846644,34846738-348468... 50 4e-07
11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717 29 0.63
08_02_0318 + 15710834-15711775 29 0.63
11_01_0768 - 6442332-6443792 28 1.9
09_06_0371 + 22615809-22617431,22618312-22618422,22619361-226194... 28 1.9
05_07_0157 - 28079181-28079720 27 2.6
10_08_1033 - 22444757-22444862,22444965-22445542 26 5.9
04_03_0305 - 14125193-14125421,14125666-14127104 26 5.9
03_02_0486 - 8811539-8811610,8811725-8812231,8812327-8812551,881... 26 5.9
02_02_0645 - 12599888-12600527,12602879-12603192 26 5.9
10_08_0448 + 18015609-18016052,18017147-18017248,18017332-180174... 26 7.8
10_02_0009 + 4128909-4130123 26 7.8
08_01_0789 + 7640021-7640382,7643435-7643480,7644514-7644638,764... 26 7.8
05_01_0334 - 2642998-2643063,2643125-2643169,2643552-2643617,264... 26 7.8
01_01_0616 + 4586086-4586835 26 7.8
>03_05_0107 -
20883353-20883627,20883739-20883801,20884608-20884725,
20885012-20885023
Length = 155
Score = 72.9 bits (171), Expect = 5e-14
Identities = 37/79 (46%), Positives = 48/79 (60%)
Frame = +2
Query: 59 MSLQEQFDQAAANVRNLKSVPSDSDLLELYALFKQATSGDADPANRPGLLDLRGKAKFDA 238
M LQE F++ A V+ L S+ D L LY L+KQAT GD + +RPG+ R +AK+DA
Sbjct: 1 MGLQEDFEEYAEKVKTLPESTSNEDKLILYGLYKQATVGDVN-TSRPGIFAQRDRAKWDA 59
Query: 239 WHKKAGTSKEDAQKAYIAK 295
W G SKE+A YI K
Sbjct: 60 WKAVEGKSKEEAMSDYITK 78
>08_01_0417 -
3692247-3692329,3692442-3692504,3693233-3693350,
3694084-3694095
Length = 91
Score = 71.3 bits (167), Expect = 2e-13
Identities = 37/79 (46%), Positives = 47/79 (59%)
Frame = +2
Query: 59 MSLQEQFDQAAANVRNLKSVPSDSDLLELYALFKQATSGDADPANRPGLLDLRGKAKFDA 238
M LQE F+Q A + L S+ + L LY L+KQAT GD + A RPG+ R +AK+DA
Sbjct: 1 MGLQEDFEQYAEKAKTLPESTSNENKLILYGLYKQATVGDVNTA-RPGIFAQRDRAKWDA 59
Query: 239 WHKKAGTSKEDAQKAYIAK 295
W G SKE+A YI K
Sbjct: 60 WKAVEGKSKEEAMSDYITK 78
>06_01_0108 -
860080-860162,860276-860338,860857-860974,861481-861492
Length = 91
Score = 67.7 bits (158), Expect = 2e-12
Identities = 34/79 (43%), Positives = 46/79 (58%)
Frame = +2
Query: 59 MSLQEQFDQAAANVRNLKSVPSDSDLLELYALFKQATSGDADPANRPGLLDLRGKAKFDA 238
M LQE+F++ A + L S+ D L LY L+KQAT G RPG+ +L+ + K+DA
Sbjct: 1 MGLQEEFEEFAEKAKTLPDTISNEDKLLLYGLYKQATVGPVT-TGRPGIFNLKDRYKWDA 59
Query: 239 WHKKAGTSKEDAQKAYIAK 295
W G SKE+A YI K
Sbjct: 60 WKAVEGKSKEEAMADYITK 78
>04_04_1623 -
34846056-34846223,34846547-34846644,34846738-34846829,
34847096-34847202,34847385-34847490,34848108-34848547
Length = 336
Score = 50.0 bits (114), Expect = 4e-07
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Frame = +2
Query: 65 LQEQFDQA----AANVRNLKSVPSDSDLLELYALFKQATSGDADPANRPGLLDLRGKAKF 232
L E F A AA+ + SVP + L +LY L+K AT G A +P L L+ +AK+
Sbjct: 90 LDEDFSAASAFVAASAASGTSVPEQAQL-QLYGLYKIATEGPC-TAPQPSALKLKARAKW 147
Query: 233 DAWHKKAGTSKEDAQKAYI 289
+AWHK E+A + YI
Sbjct: 148 NAWHKLGAMPTEEAMQKYI 166
>11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717
Length = 1055
Score = 29.5 bits (63), Expect = 0.63
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 113 SVPSDSDLLELYALFKQATSGDADPANRPGLLDLRGKAKFDAWHKKAGTSK 265
+VPS SDL+++++ + A+ AN + K + DA AG K
Sbjct: 972 AVPSRSDLIKIFSQYGPVNEAKAETANNANCAQVIFKRRMDAEAAFAGAGK 1022
>08_02_0318 + 15710834-15711775
Length = 313
Score = 29.5 bits (63), Expect = 0.63
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -1
Query: 258 VPAFLCHASNLALPLK-SRRPGRLAGSASPDVACLNRAYSSSKSLSLGTDFRFLTLAA 88
+P H + L LP + PG+LA +A D C AY+++ ++L + L L+A
Sbjct: 153 LPFLSAHVAVLVLPAAVAPYPGQLAHAADVDARCAYPAYAAALLVALAALYAPLLLSA 210
>11_01_0768 - 6442332-6443792
Length = 486
Score = 27.9 bits (59), Expect = 1.9
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 86 AAANVRNLKSVPSDSDLLELYALFKQATSGDADPANRPGL 205
+ A V +K VP D LL ++A F Q G A +RP L
Sbjct: 148 SGAGVNTVK-VPEDEWLLAIHASFSQLLRGPAGGVSRPPL 186
>09_06_0371 + 22615809-22617431,22618312-22618422,22619361-22619453,
22619562-22619661,22619754-22619834,22620774-22621047,
22621254-22622069,22622921-22623029,22623509-22623602,
22623881-22623939,22624150-22624197
Length = 1135
Score = 27.9 bits (59), Expect = 1.9
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +2
Query: 65 LQEQFDQAAANVRNLKSVPSDSDLLELYALFKQATSGDADPANRPGLLDLRGKAKFD 235
L + D A +R+L S+ DLL+ L K+ T+G+ + GL++ K++
Sbjct: 1041 LNYRIDMPDAEIRDLVSMKRWDDLLKSDQLTKELTNGNTFAGWKEGLINFPPTYKYE 1097
>05_07_0157 - 28079181-28079720
Length = 179
Score = 27.5 bits (58), Expect = 2.6
Identities = 23/63 (36%), Positives = 27/63 (42%)
Frame = -1
Query: 273 ASSFEVPAFLCHASNLALPLKSRRPGRLAGSASPDVACLNRAYSSSKSLSLGTDFRFLTL 94
A S +P F ++ A P R R G VAC + A SS K L LG LTL
Sbjct: 7 AVSSTLPLFHVRTASSA-PAALRFTTRGRGGGRHSVACNSTAASSPKVLELGDAIAGLTL 65
Query: 93 AAA 85
A
Sbjct: 66 EEA 68
>10_08_1033 - 22444757-22444862,22444965-22445542
Length = 227
Score = 26.2 bits (55), Expect = 5.9
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +2
Query: 101 RNLKSVPSDSDLLELYALFKQATSGDADPA 190
R L + P D DLL LY TS D D A
Sbjct: 149 RALLASPDDGDLLSLYGQLLWETSQDKDRA 178
>04_03_0305 - 14125193-14125421,14125666-14127104
Length = 555
Score = 26.2 bits (55), Expect = 5.9
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 134 LLELYALFKQATSGDADPANRPGLLDLRGKAKFDAWHKKAGTSKEDAQKAYIAKG 298
L L F +G + PAN PG L +R ++ ++K+ KE+ ++ KG
Sbjct: 375 LPNLEVKFVDPDTGRSLPANTPGELCVRSQSVMQGYYKR----KEETERTVDGKG 425
>03_02_0486 -
8811539-8811610,8811725-8812231,8812327-8812551,
8812648-8813064
Length = 406
Score = 26.2 bits (55), Expect = 5.9
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = -1
Query: 237 ASNLALPLKSRR-PGRLA-GSASPDVACL 157
A++L L RR PGRLA GS++P V C+
Sbjct: 20 AASLQCGLSFRRQPGRLAGGSSAPSVRCM 48
>02_02_0645 - 12599888-12600527,12602879-12603192
Length = 317
Score = 26.2 bits (55), Expect = 5.9
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -1
Query: 288 MYAFWASSFEVPAFLCHASNLALPLKS 208
M AFWA SF L + S A LKS
Sbjct: 85 MEAFWADSFVTDGLLLYISERASSLKS 111
>10_08_0448 + 18015609-18016052,18017147-18017248,18017332-18017475,
18017555-18017705,18017793-18017820,18018456-18018621,
18018701-18018764,18019320-18019423,18019572-18019710,
18020114-18020232,18020333-18020485,18020565-18020654,
18020952-18021029,18021671-18021829,18021914-18022117,
18022209-18022414,18022495-18022630,18022859-18022898,
18023329-18023408,18023569-18024228
Length = 1088
Score = 25.8 bits (54), Expect = 7.8
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 161 QATSGDADPANRPGLLDLRGKAKFDAWHKKAGT 259
+ SG AD + P + R K FD+W K G+
Sbjct: 1019 EVKSGQADASLNPDMELRRLKQNFDSWKKDFGS 1051
>10_02_0009 + 4128909-4130123
Length = 404
Score = 25.8 bits (54), Expect = 7.8
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2
Query: 302 FYPSQCMPSGRLPLKCRLS 246
FYPS MPS PL+ LS
Sbjct: 55 FYPSSLMPSSMAPLRLVLS 73
>08_01_0789 +
7640021-7640382,7643435-7643480,7644514-7644638,
7645028-7645092,7647642-7648186
Length = 380
Score = 25.8 bits (54), Expect = 7.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 264 FEVPAFLCHASNLALPLKSRRPG 196
F+VP F CH NL + +K+ + G
Sbjct: 65 FKVPLFRCHWVNLRIGVKADKEG 87
>05_01_0334 - 2642998-2643063,2643125-2643169,2643552-2643617,
2643625-2643730,2643770-2644349,2645780-2645871,
2645969-2646035,2646126-2646231,2646628-2646708,
2646789-2647058,2647158-2648788,2648834-2649385,
2650602-2651324,2651451-2651526
Length = 1486
Score = 25.8 bits (54), Expect = 7.8
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = -1
Query: 207 RRPGRLAGSASPDVACLNRAYSSSKSL---SLGTDFRFLTLAAA*SNCS*RD 61
+ P + A SP + LN + SSS+SL S+G + L + SNC +D
Sbjct: 915 KTPSKSANELSPIFSPLNPSKSSSRSLSKPSVGRELLTLDPDSNPSNCQHKD 966
>01_01_0616 + 4586086-4586835
Length = 249
Score = 25.8 bits (54), Expect = 7.8
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -1
Query: 222 LPLKSRRPGRLAGSASPDVACLNRAYSSSKSLSLGTD 112
LP+ +RRPG PD L SSS S S D
Sbjct: 179 LPVMTRRPGSCKQCGDPDTGYLIAVCSSSCSESYRRD 215
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,931,604
Number of Sequences: 37544
Number of extensions: 177851
Number of successful extensions: 492
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 489
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 423156300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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