Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_J19
(324 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003140-9|AAB54171.1| 86|Caenorhabditis elegans Acyl-coenzyme... 93 4e-20
Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical pr... 77 3e-15
Z68004-6|CAA91987.2| 116|Caenorhabditis elegans Hypothetical pr... 59 6e-10
AL023828-1|CAA19448.1| 115|Caenorhabditis elegans Hypothetical ... 51 2e-07
Z92826-2|CAB07319.1| 266|Caenorhabditis elegans Hypothetical pr... 50 5e-07
U00063-1|AAK18960.1| 146|Caenorhabditis elegans Acyl-coenzyme a... 48 2e-06
Z81120-7|CAB03343.2| 274|Caenorhabditis elegans Hypothetical pr... 44 3e-05
Z95559-11|CAB09005.2| 435|Caenorhabditis elegans Hypothetical p... 31 0.14
U27312-8|AAZ32809.1| 219|Caenorhabditis elegans Hypothetical pr... 29 0.77
U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein ... 28 1.3
U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein. 28 1.3
Z81565-3|CAH60773.1| 489|Caenorhabditis elegans Hypothetical pr... 27 2.3
Z81565-2|CAB04581.1| 507|Caenorhabditis elegans Hypothetical pr... 27 2.3
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z71185-5|CAA94911.1| 1078|Caenorhabditis elegans Hypothetical pr... 26 7.2
U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna bindi... 26 7.2
U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna bindi... 26 7.2
U41012-4|AAA82296.2| 413|Caenorhabditis elegans Hypothetical pr... 25 9.5
AL033514-12|CAA22099.1| 208|Caenorhabditis elegans Hypothetical... 25 9.5
AF047663-8|AAK84581.1| 114|Caenorhabditis elegans Hypothetical ... 25 9.5
AF045641-5|AAC02577.2| 554|Caenorhabditis elegans Hypothetical ... 25 9.5
>AF003140-9|AAB54171.1| 86|Caenorhabditis elegans Acyl-coenzyme a
binding proteinprotein 1 protein.
Length = 86
Score = 93.1 bits (221), Expect = 4e-20
Identities = 42/72 (58%), Positives = 57/72 (79%)
Frame = +2
Query: 77 FDQAAANVRNLKSVPSDSDLLELYALFKQATSGDADPANRPGLLDLRGKAKFDAWHKKAG 256
FD AAA V+ LK+ PS+ +LL+LYALFKQ T GD + ++PG+ DL+GKAK+ AW +K G
Sbjct: 5 FDDAAATVKTLKTSPSNDELLKLYALFKQGTVGD-NTTDKPGMFDLKGKAKWSAWDEKKG 63
Query: 257 TSKEDAQKAYIA 292
+K+DAQKAY+A
Sbjct: 64 LAKDDAQKAYVA 75
>Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical
protein R06F6.9 protein.
Length = 385
Score = 77.0 bits (181), Expect = 3e-15
Identities = 42/100 (42%), Positives = 63/100 (63%)
Frame = +2
Query: 17 RSLLYLNLPIS*VIMSLQEQFDQAAANVRNLKSVPSDSDLLELYALFKQATSGDADPANR 196
RS+LY N +S S Q F++A N++ LK P + L+LY LFKQAT+GD R
Sbjct: 10 RSVLY-NPQVSVRSFSAQADFEKAQKNLKTLKEEPDNDVKLQLYGLFKQATAGDVQ-GKR 67
Query: 197 PGLLDLRGKAKFDAWHKKAGTSKEDAQKAYIAKGRKGLVA 316
PG++D G+AK+DAW+ G ++++A+ Y AK GL++
Sbjct: 68 PGMMDFVGRAKYDAWNTLKGQTQDEARANY-AKLVGGLIS 106
>Z68004-6|CAA91987.2| 116|Caenorhabditis elegans Hypothetical
protein F47B10.7 protein.
Length = 116
Score = 59.3 bits (137), Expect = 6e-10
Identities = 32/81 (39%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Frame = +2
Query: 59 MSLQEQFDQAAANVRNL-KSVP---SDSDLLELYALFKQATSGDADPANRPGLLDLRGKA 226
MSLQE+FD A ++ L K+ P S+ L Y+LFKQA+ GD + +RPG+ + +
Sbjct: 1 MSLQEKFDAAVEIIQKLPKTGPVATSNDQKLTFYSLFKQASIGDVN-TDRPGIFSIIERK 59
Query: 227 KFDAWHKKAGTSKEDAQKAYI 289
K+D+W + G S+++A++ YI
Sbjct: 60 KWDSWKELEGVSQDEAKERYI 80
>AL023828-1|CAA19448.1| 115|Caenorhabditis elegans Hypothetical
protein Y17G7B.1 protein.
Length = 115
Score = 51.2 bits (117), Expect = 2e-07
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +2
Query: 77 FDQAAANVRNLKSVPSDSDLLELYALFKQATSGDA--DPANRPGLLDLRGKAKFDAWHKK 250
F+ AA +R LKS P+D + L+LYAL+KQA GD + D G+ K+ AW +
Sbjct: 15 FEIAAEEMRRLKSEPTDRERLKLYALYKQALHGDIPNEDVYPVPAGDEVGRKKYAAWKSQ 74
Query: 251 AGTSKEDAQKAYIA 292
G + E + Y+A
Sbjct: 75 KGANSEKCRADYVA 88
>Z92826-2|CAB07319.1| 266|Caenorhabditis elegans Hypothetical
protein C18D11.2 protein.
Length = 266
Score = 49.6 bits (113), Expect = 5e-07
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Frame = +2
Query: 77 FDQAAANVRNL-KSVP---SDSDLLELYALFKQATSGDADPANRPGLLDLRGKAKFDAWH 244
F+ A V+NL K P S + L YALFKQAT G D +P D++G K++AW+
Sbjct: 4 FETAVFIVQNLPKDGPIKTSTDEKLNFYALFKQATHGKCD-LPKPSFYDIQGVYKWNAWN 62
Query: 245 KKAGTSKEDAQKAYI 289
K + ++A++AY+
Sbjct: 63 KLDNMTMDEAKQAYV 77
>U00063-1|AAK18960.1| 146|Caenorhabditis elegans Acyl-coenzyme a
binding proteinprotein 4 protein.
Length = 146
Score = 47.6 bits (108), Expect = 2e-06
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Frame = +2
Query: 62 SLQEQFDQAAANVRNL-KSVP---SDSDLLELYALFKQATSGDADPANRPGLLDLRGKAK 229
SL EQF+ A + L K+ P S +D L++Y+L+KQATSG D +P + + K
Sbjct: 4 SLDEQFEAAVWIINALPKNGPIKTSINDQLQMYSLYKQATSGKCDTI-QPYFFQIEQRMK 62
Query: 230 FDAWHKKAGTSKEDAQKAYIAK 295
++AW++ + +A+ Y+ K
Sbjct: 63 WNAWNQLGNMDEAEAKAQYVEK 84
>Z81120-7|CAB03343.2| 274|Caenorhabditis elegans Hypothetical
protein T12D8.3 protein.
Length = 274
Score = 43.6 bits (98), Expect = 3e-05
Identities = 21/74 (28%), Positives = 35/74 (47%)
Frame = +2
Query: 65 LQEQFDQAAANVRNLKSVPSDSDLLELYALFKQATSGDADPANRPGLLDLRGKAKFDAWH 244
L+ +FD A + + +L+ Y L+KQA G AD P + + KF++W
Sbjct: 28 LEAKFDAATTRLPGFLTKIDQKTILKFYGLYKQAVEGPADSKKGPYWFETVARKKFNSWL 87
Query: 245 KKAGTSKEDAQKAY 286
+ S+ A +AY
Sbjct: 88 ANSQMSRSRAMEAY 101
>Z95559-11|CAB09005.2| 435|Caenorhabditis elegans Hypothetical
protein Y41E3.7a protein.
Length = 435
Score = 31.5 bits (68), Expect = 0.14
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 131 DLLELYALFKQATSGD-ADPANRPGLLDLRGKAKFDAWHKKAGTSKEDAQKAYI 289
D ++L +L KQ G+ +D + G LD+ G AW + S+++A +++
Sbjct: 49 DRIKLLSLSKQVQHGEISDEFDNAGWLDITGNDVNKAWRELGSLSRDEAMASFV 102
>U27312-8|AAZ32809.1| 219|Caenorhabditis elegans Hypothetical
protein F26A1.15 protein.
Length = 219
Score = 29.1 bits (62), Expect = 0.77
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 212 LRGKAKFDAWHKKAGTSKEDAQKAYIAKGRK 304
+ G K+ AW+K G +KE+A + Y+ +K
Sbjct: 157 INGNEKWHAWNKCRGLTKEEASEQYVEAVQK 187
>U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein 502
protein.
Length = 1173
Score = 28.3 bits (60), Expect = 1.3
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +2
Query: 170 SGDADPANRPGLLDLRGKAKFDAWHKKAGTSK---EDAQKAYIAKGRKGLVAS 319
S + + ++ + DLR K + HKKA +K E A++ + KG KG+ S
Sbjct: 807 SSEQESNDKQTIADLRKKLDLEKAHKKAVINKLEEEMAKRQPLKKGEKGVTKS 859
>U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein.
Length = 1173
Score = 28.3 bits (60), Expect = 1.3
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +2
Query: 170 SGDADPANRPGLLDLRGKAKFDAWHKKAGTSK---EDAQKAYIAKGRKGLVAS 319
S + + ++ + DLR K + HKKA +K E A++ + KG KG+ S
Sbjct: 807 SSEQESNDKQTIADLRKKLDLEKAHKKAVINKLEEEMAKRQPLKKGEKGVTKS 859
>Z81565-3|CAH60773.1| 489|Caenorhabditis elegans Hypothetical
protein K06G5.1b protein.
Length = 489
Score = 27.5 bits (58), Expect = 2.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 230 FDAWHKKAGTSKEDAQKAYIAKG 298
F AW ++ T ED QK + AKG
Sbjct: 302 FTAWWSESQTPSEDLQKKFAAKG 324
>Z81565-2|CAB04581.1| 507|Caenorhabditis elegans Hypothetical
protein K06G5.1a protein.
Length = 507
Score = 27.5 bits (58), Expect = 2.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 230 FDAWHKKAGTSKEDAQKAYIAKG 298
F AW ++ T ED QK + AKG
Sbjct: 302 FTAWWSESQTPSEDLQKKFAAKG 324
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 27.1 bits (57), Expect = 3.1
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = +2
Query: 77 FDQAAANVRNLKSVPSDSDLLELYALFKQATSGDADPANRPGLLDLRGKAKFDAWHKKAG 256
+ + + N++ L + S+ + L L + +S DAD R K K DA + AG
Sbjct: 462 WSEFSTNIK-LGVMEDPSNRMRLAKLLRFQSSNDADKTTTLAAYVERMKEKQDAIYYMAG 520
Query: 257 TSKEDAQ 277
TS+++ +
Sbjct: 521 TSRKEVE 527
>Z71185-5|CAA94911.1| 1078|Caenorhabditis elegans Hypothetical
protein C35A5.8 protein.
Length = 1078
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/25 (56%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +2
Query: 104 NLKSVPSDSDLLEL-YALFKQATSG 175
NLK PS+SDLL+L +LFK + G
Sbjct: 587 NLKFWPSNSDLLDLSLSLFKDLSLG 611
>U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform a protein.
Length = 868
Score = 25.8 bits (54), Expect = 7.2
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +2
Query: 176 DADPANRPGLLDLRGKAKFDAWHKKAGTSKEDAQ--KAY 286
+A ANR G K D WHK G KED KAY
Sbjct: 141 NAPAANRNGNNTSTAKTG-DYWHKNGGERKEDKSQPKAY 178
>U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform b protein.
Length = 1065
Score = 25.8 bits (54), Expect = 7.2
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +2
Query: 176 DADPANRPGLLDLRGKAKFDAWHKKAGTSKEDAQ--KAY 286
+A ANR G K D WHK G KED KAY
Sbjct: 338 NAPAANRNGNNTSTAKTG-DYWHKNGGERKEDKSQPKAY 375
>U41012-4|AAA82296.2| 413|Caenorhabditis elegans Hypothetical
protein C06A6.5 protein.
Length = 413
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -1
Query: 159 LNRAYSSSKSLSLGTDFRFLTLAAA*SNCS*RDMMTQEMGK 37
+ + Y S++S+ T+F L+ A + S +D + QEM K
Sbjct: 114 ITKEYRSTRSVEALTNFVKFQLSTAINEFSSQDQLNQEMDK 154
>AL033514-12|CAA22099.1| 208|Caenorhabditis elegans Hypothetical
protein Y75B8A.11 protein.
Length = 208
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 185 PANRPGLLDLRGKAKFDAWHKKAGTSKEDAQKA 283
P RP LL G+A + K++G E +Q +
Sbjct: 25 PEKRPALLSRYGRAVLPRYGKRSGNLMESSQNS 57
>AF047663-8|AAK84581.1| 114|Caenorhabditis elegans Hypothetical
protein W09G12.5 protein.
Length = 114
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +2
Query: 155 FKQATSGDADPANRPGLLDLRGKAKFDAWHKKAGTS 262
F +A + A P +P L+D KFD K G +
Sbjct: 42 FNEALANHASPGQKPRLIDGIVLTKFDTIDDKVGAA 77
>AF045641-5|AAC02577.2| 554|Caenorhabditis elegans Hypothetical
protein F53H1.3 protein.
Length = 554
Score = 25.4 bits (53), Expect = 9.5
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -2
Query: 296 PSQCMPSGRLPLKCRLSYATHRT*PCPS-NRGDQGDWQGQHRR 171
P + +PS R P AT T PS G +GDWQG +RR
Sbjct: 411 PFKGIPSTR-PFSMDDFLATLETNGGPSLTCGTKGDWQGLYRR 452
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,179,106
Number of Sequences: 27780
Number of extensions: 134388
Number of successful extensions: 327
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 321
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 387641448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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