Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_J19
         (324 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    25   0.30 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   1.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   3.7  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   4.9  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    20   8.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   8.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   8.6  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 24.6 bits (51), Expect = 0.30
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 300 LPFAMYAFWASSFEVPAFLC 241
           +PFA+Y     S+ +P F+C
Sbjct: 240 MPFAVYVLVNGSWSLPGFVC 259



 Score = 19.8 bits (39), Expect = 8.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 186 GSASPDVACLNRAYSSSKSLSLGTD 112
           GS+SP  +  +  +SS    SLG++
Sbjct: 87  GSSSPSPSSPSSFFSSVSPTSLGSE 111


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = -2

Query: 317 MRRDPFYPSQCM-PSGRLPLKCRLSY 243
           M    F   QC+ P+G LPL  R SY
Sbjct: 595 MNAGEFANLQCIVPTGDLPLNIRWSY 620


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = -1

Query: 306  PFLPFAMYAFWASSFEVPA-FLCHASNL 226
            P LPF  + FW     +P+ F+  A N+
Sbjct: 1154 PHLPFTPFNFWNPPPFMPSPFMAGAPNV 1181


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -1

Query: 264 FEVPAFLCHASNLALPLKSRRPGRL 190
           + VP F+CH   L     S + G L
Sbjct: 47  WNVPTFMCHKYGLRFEEVSEKYGIL 71


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 39  YPFLESSCLFKSNS 80
           +PF E SC+ K  S
Sbjct: 165 FPFDEQSCIMKFGS 178


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 198 LVSSI*GARLSSMRGIRKPAL 260
           +VSS+   R++  RG+  P +
Sbjct: 220 VVSSVANVRIADHRGVMPPVI 240


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 198 LVSSI*GARLSSMRGIRKPAL 260
           +VSS+   R++  RG+  P +
Sbjct: 220 VVSSVANVRIADHRGVMPPVI 240


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,075
Number of Sequences: 438
Number of extensions: 1670
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7093251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)