Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_J18
(550 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0) 34 0.088
SB_58044| Best HMM Match : Vitellogenin_N (HMM E-Value=0.022) 31 0.47
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 31 0.82
SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.82
SB_41491| Best HMM Match : Kazal_1 (HMM E-Value=1.1e-12) 30 1.1
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_26296| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 3.3
SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_15247| Best HMM Match : Hormone_5 (HMM E-Value=0.98) 28 4.4
SB_52786| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_16461| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_21821| Best HMM Match : MRG (HMM E-Value=0) 28 5.8
SB_39205| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.5e-09) 27 7.6
SB_2317| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_38674| Best HMM Match : TIR (HMM E-Value=2.5e-31) 27 7.6
>SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 325
Score = 33.9 bits (74), Expect = 0.088
Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +3
Query: 429 TPWCGSDYKTYKNQGRL---FCAPNCGVKVTLARQAPCP 536
TP CGSD KTY N L C P K+ L PCP
Sbjct: 205 TPVCGSDNKTYANLCNLEVEACKPENTDKLQLLHDGPCP 243
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 432 PWCGSDYKTYKNQGRLFCAPNCGVKVTLARQAPCPS 539
P CG+D KTY N L A + LA + PCP+
Sbjct: 128 PVCGTDQKTYDNMCLLERAACKDDGLMLAHEGPCPT 163
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +3
Query: 432 PWCGSDYKTYKNQGRLFCAPNC--GVKVTLARQAPCP 536
P CG+D TY N+ + +C G K+ LA PCP
Sbjct: 289 PACGTDGNTYPNR-CVLAIQSCETGEKLQLAHDGPCP 324
>SB_58044| Best HMM Match : Vitellogenin_N (HMM E-Value=0.022)
Length = 1671
Score = 31.5 bits (68), Expect = 0.47
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +3
Query: 285 PSFFLIKCSSQTKHRYQVKG--KHQLLALVEHHDKQLRNARRIAFQ--HQNTTPW 437
P + LI+C S + G ++ LV++ DK + RR+ + HQNTT W
Sbjct: 288 PFYELIRCFSDKSVEDREVGLCAREIHKLVKYDDKAFQKIRRLVLEREHQNTTTW 342
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 30.7 bits (66), Expect = 0.82
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +3
Query: 432 PWCGSDYKTYKNQGRLFCAPNC--GVKVTLARQAPCPSS 542
P CGSD KTY N+ L A +C +T++ PCP +
Sbjct: 1078 PVCGSDGKTYNNE-CLMRAASCKANKNITVSSYFPCPET 1115
>SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4475
Score = 30.7 bits (66), Expect = 0.82
Identities = 19/36 (52%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +3
Query: 432 PWCGSDYKTYKNQGRLFCAPNCGVK--VTLARQAPC 533
P CGSD KTYKN+ L A C K VT+A Q C
Sbjct: 3980 PVCGSDGKTYKNECELKRAA-CESKKNVTVASQGEC 4014
>SB_41491| Best HMM Match : Kazal_1 (HMM E-Value=1.1e-12)
Length = 77
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 432 PWCGSDYKTYKNQGRLFCAPNCGVKVTLARQAPCP 536
P CGSD KTY N L A C + + + CP
Sbjct: 38 PVCGSDGKTYGNMCFLKAAIKCNPDLYMKHKGACP 72
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +3
Query: 432 PWCGSDYKTYKNQGRL---FCAPNCGVKVTLARQAPCPSSSK 548
P CGS+ KTY N+ L C N + + ++ P P K
Sbjct: 301 PICGSNNKTYANECELRMDSCKNNKSIAIQFRKECPAPCQGK 342
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +3
Query: 426 TTPWCGSDYKTYKNQ---GRLFCAPNCGVKVTLARQAPC 533
T P C SD +TY N+ + C N + VT R PC
Sbjct: 2162 TKPICASDGQTYDNECLMQKRACENNQNLNVTSDRACPC 2200
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 423 NTTPWCGSDYKTYKNQGRLF-CAPNCGVKVTLARQAPCPSSSK 548
N + CGSD TY N+ L A +T+ Q PCP + K
Sbjct: 1448 NRSDVCGSDRMTYSNECTLTQTACQESKNLTVVSQGPCPPNPK 1490
>SB_26296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 83 ALLILGFIASQATCMNIRYKRQIENNANLFIDKNGWNKSQDGNRP 217
A +I GF+ + C +RY Q+ N +N W+ S NRP
Sbjct: 6 ATIIRGFLKFRIICEKVRYFTQLRACYN--PQQNKWDTSHTNNRP 48
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 432 PWCGSDYKTYKNQGRLFC-APNCGVKVTLARQAPCPSSS 545
P CGSD +TY N RL G VT+ RQ C S
Sbjct: 448 PVCGSDLRTYVNLCRLQVEVCQTGRAVTVLRQGACDPCS 486
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 420 QNTTPWCGSDYKTYKNQGRL---FCAPNCGVKV 509
+ +P CGSD KTY+N+ +L C N V++
Sbjct: 515 KEASPVCGSDGKTYENECKLRVESCKANQNVRI 547
>SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 432 PWCGSDYKTYKNQGRL-FCAPNCGVKVTLARQAPC 533
P CGS+ K Y N+ L A +T+AR++PC
Sbjct: 214 PVCGSNGKDYNNECELQQFACKTNTMITVARRSPC 248
>SB_15247| Best HMM Match : Hormone_5 (HMM E-Value=0.98)
Length = 997
Score = 28.3 bits (60), Expect = 4.4
Identities = 24/68 (35%), Positives = 31/68 (45%)
Frame = +2
Query: 95 LGFIASQATCMNIRYKRQIENNANLFIDKNGWNKSQDGNRPEWIPIQNGYRIQYPLDNNY 274
LG I SQA NIR Q N +L + N + P+Q GY+ PL +NY
Sbjct: 612 LGQITSQAIGSNIR---QDVANVSLPLQMPISNPKTSVPQGGATPMQFGYQGYGPLQHNY 668
Query: 275 NFIAFIFP 298
+ IFP
Sbjct: 669 GDMNTIFP 676
>SB_52786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 392
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/63 (23%), Positives = 26/63 (41%)
Frame = -2
Query: 546 LMKTGTGLAWPKSL*LHNLGHKIVFPGFCKFYNRYHTTGLYSGVEMQFSAHFSIVCRDVP 367
L + G + P+S L H++ F C N T + GVE++ + R +P
Sbjct: 74 LARAGKAIKMPRSF-LVRAKHEVAFSEICHHENNTENTRNHEGVELEKRSFLPFTQRPLP 132
Query: 366 PVL 358
+
Sbjct: 133 SAI 135
>SB_16461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 173
Score = 28.3 bits (60), Expect = 4.4
Identities = 9/37 (24%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Frame = +3
Query: 6 LYLYLCYKICHINYFYY----YNLKWISCARFLYWVL 104
++L+ +CH+NY Y+ +++ W+ ++Y V+
Sbjct: 121 IWLFHVSLLCHVNYMYHVIWLFHVSWLCHVNYMYHVI 157
>SB_21821| Best HMM Match : MRG (HMM E-Value=0)
Length = 292
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 98 GFIASQATCMNIRYKRQIENNANLFIDKNGWNKSQDGNRPEWIP 229
G + +A C+ + K E A I NGWNK+ D EW+P
Sbjct: 18 GPLIYEAKCIRGQLK---EKTARYLIHYNGWNKNWD----EWVP 54
>SB_39205| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.5e-09)
Length = 1084
Score = 27.5 bits (58), Expect = 7.6
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = +3
Query: 336 VKGKHQLLALVEHHDKQLRNARRIAFQHQNTTPW 437
+KG + ++H +K+ +NA++I+ + PW
Sbjct: 137 IKGVSTNIFFIDHQEKEEKNAKKISLKVFQCQPW 170
>SB_2317| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 199
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = -3
Query: 536 RARGLPGQSHFDSTIWGTK*SSLVFVSFIIATTPRGCILVLKCNSPRISQLFVVMFH 366
R G PG FD + T + + F+ I TP+ ++ +P+I+ F H
Sbjct: 13 RTSGSPGLQEFDQQLPATIPTRINFLDTYIHITPQRTLISSLYTNPQIAPYFYTTTH 69
>SB_38674| Best HMM Match : TIR (HMM E-Value=2.5e-31)
Length = 870
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -3
Query: 461 VSFIIATTPRGCILVLKCNSPRISQLFVVMFHQ 363
V + +A R ++ CNSP + + V++F+Q
Sbjct: 86 VQYYLAIVCRSSTRIIFCNSPEVKRKNVILFYQ 118
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,693,449
Number of Sequences: 59808
Number of extensions: 402819
Number of successful extensions: 986
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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