Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_J18
         (550 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL022274-2|CAA18358.1|  329|Caenorhabditis elegans Hypothetical ...    27   6.7  
AF016451-13|AAB66007.1|  445|Caenorhabditis elegans Activated in...    27   6.7  

>AL022274-2|CAA18358.1|  329|Caenorhabditis elegans Hypothetical
           protein H24D24.2 protein.
          Length = 329

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -3

Query: 521 PGQSHFDSTIWGTK*SSLVFVSFIIATTPRGCILVL 414
           P  S  D+    TK   LV V+F+I+TTP G I  L
Sbjct: 249 PSVSSNDNNDRSTKMVVLVTVTFLISTTPLGIIYFL 284


>AF016451-13|AAB66007.1|  445|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 8 protein.
          Length = 445

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 417 HQNTTPWCGSDYKTYKNQGRLFCAPNC 497
           +QNT     + Y T  NQG   CAP C
Sbjct: 253 NQNTNTQMYNPYNTNTNQGSANCAPAC 279


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,965,725
Number of Sequences: 27780
Number of extensions: 313714
Number of successful extensions: 778
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)