Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_J17
         (297 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L14324-7|AAA28181.2|  565|Caenorhabditis elegans Prolyl carboxy ...    29   0.79 
AF016681-4|AAB66174.2|  276|Caenorhabditis elegans Hypothetical ...    27   1.8  
U80842-16|AAB37955.2|  232|Caenorhabditis elegans Hypothetical p...    27   3.2  
U55363-2|AAA97961.3|  357|Caenorhabditis elegans Serpentine rece...    26   5.6  
Z81139-1|CAB03477.1|  294|Caenorhabditis elegans Hypothetical pr...    25   7.4  
AL132948-11|CAC51063.1|  208|Caenorhabditis elegans Hypothetical...    25   7.4  
Z78201-3|CAD36504.1| 1066|Caenorhabditis elegans Hypothetical pr...    25   9.7  
Z78199-3|CAB01577.2| 1066|Caenorhabditis elegans Hypothetical pr...    25   9.7  
Z70780-11|CAC35815.1|  138|Caenorhabditis elegans Hypothetical p...    25   9.7  
AL023856-1|CAA19566.1|  327|Caenorhabditis elegans Hypothetical ...    25   9.7  
AF108229-1|AAF17300.1| 1066|Caenorhabditis elegans VAB-8L protein.     25   9.7  
AF016449-4|AAG23998.3|  330|Caenorhabditis elegans Serpentine re...    25   9.7  

>L14324-7|AAA28181.2|  565|Caenorhabditis elegans Prolyl carboxy
           peptidase like protein1 protein.
          Length = 565

 Score = 28.7 bits (61), Expect = 0.79
 Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
 Frame = +3

Query: 48  YFHYYNLTWIICARFLYM-GYIAGLATCMNIRYKRQIENNANLFLDDNGWNKVSGREPSR 224
           Y H     W   A  +YM G         +I  +  I+N  N F+  N WN       S 
Sbjct: 190 YPHIVKGAWAGSAPLIYMNGGGVDPGAFDHITSRTYIDNGCNRFILANAWNATLNL--SS 247

Query: 225 MDPNSEWLPNSIPF 266
            D   +WL N+  F
Sbjct: 248 TDAGRQWLNNNTVF 261


>AF016681-4|AAB66174.2|  276|Caenorhabditis elegans Hypothetical
           protein F22E5.8 protein.
          Length = 276

 Score = 27.5 bits (58), Expect = 1.8
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +1

Query: 169 IYFLTITDGTKSQDGN-RPEWIPIQNGYRIQYPLDNHYN 282
           IYF  +++   S     R +W P +NGY  Q+P +   N
Sbjct: 162 IYFQRLSEDESSHKWKARIKWKPTENGYYSQFPYNLRIN 200


>U80842-16|AAB37955.2|  232|Caenorhabditis elegans Hypothetical
           protein ZC239.15 protein.
          Length = 232

 Score = 26.6 bits (56), Expect = 3.2
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +1

Query: 169 IYFLTITDGTKSQDGN-RPEWIPIQNGYRIQYP 264
           IYF  +++   S+    R +W P +NGY  Q+P
Sbjct: 162 IYFQRLSEDEPSRKWKARIKWKPTENGYYSQFP 194


>U55363-2|AAA97961.3|  357|Caenorhabditis elegans Serpentine
           receptor, class h protein28 protein.
          Length = 357

 Score = 25.8 bits (54), Expect = 5.6
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +3

Query: 51  FHYYNLTWIICARFLYMGYIAGLATCMNIRYKRQIENNANLFLDDNGWNK-VSGREPSR 224
           F YY L+      F+Y  YI+ + +  N     + ++NA  F     W K ++G  P+R
Sbjct: 139 FQYYKLSIRFGHLFVYGTYISSVCSLSNFALLYENQDNAKFF-----WYKLLAGNMPAR 192


>Z81139-1|CAB03477.1|  294|Caenorhabditis elegans Hypothetical
           protein W05H5.1 protein.
          Length = 294

 Score = 25.4 bits (53), Expect = 7.4
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +3

Query: 30  KICHINYFHYYNLTWIICARFLYMGYIAGLATCMNIRYKRQIENNAN 170
           KICHI Y +Y     ++   FL    +  + TC+ I Y  ++EN  N
Sbjct: 169 KICHIKYSNY-----LMALSFL----LGSIDTCLGI-YNFKLENRVN 205


>AL132948-11|CAC51063.1|  208|Caenorhabditis elegans Hypothetical
           protein Y39B6A.13 protein.
          Length = 208

 Score = 25.4 bits (53), Expect = 7.4
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 96  YMGYIAGLATCMNIRYKRQIENNANLFLDDNGWNKVSGRE 215
           Y+  +  LAT  N+  K   EN+ NL+  D  + K+  R+
Sbjct: 120 YISRLLELAT--NVLLKDLFENSVNLYPKDGKFRKIGARD 157


>Z78201-3|CAD36504.1| 1066|Caenorhabditis elegans Hypothetical
           protein K12F2.2a protein.
          Length = 1066

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -1

Query: 255 NSVTILNWDPFGTVPVLRLC-SIRYRQEINSRCFLS 151
           +  ++L   P  T+P LRLC SI      + RC L+
Sbjct: 6   SKTSLLLHSPLRTIPKLRLCASISSEDVAHGRCSLT 41


>Z78199-3|CAB01577.2| 1066|Caenorhabditis elegans Hypothetical
           protein K12F2.2a protein.
          Length = 1066

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -1

Query: 255 NSVTILNWDPFGTVPVLRLC-SIRYRQEINSRCFLS 151
           +  ++L   P  T+P LRLC SI      + RC L+
Sbjct: 6   SKTSLLLHSPLRTIPKLRLCASISSEDVAHGRCSLT 41


>Z70780-11|CAC35815.1|  138|Caenorhabditis elegans Hypothetical
           protein F46B6.12 protein.
          Length = 138

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 207 GREPSRMDPNSEWLPNSIPFG 269
           G EP   DP  EW+  S+  G
Sbjct: 76  GLEPFDFDPRDEWIAKSVETG 96


>AL023856-1|CAA19566.1|  327|Caenorhabditis elegans Hypothetical
           protein Y94A7B.4 protein.
          Length = 327

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 165 RCFLSAFCILYSCR*PDRLYNPCIRSAHRLSMS 67
           +C+   F  L+ CR PD   N  +  + R S++
Sbjct: 295 KCYRDVFIGLFGCRKPDLAINTVVLPSIRFSIA 327


>AF108229-1|AAF17300.1| 1066|Caenorhabditis elegans VAB-8L protein.
          Length = 1066

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -1

Query: 255 NSVTILNWDPFGTVPVLRLC-SIRYRQEINSRCFLS 151
           +  ++L   P  T+P LRLC SI      + RC L+
Sbjct: 6   SKTSLLLHSPLRTIPKLRLCASISSEDVAHGRCSLT 41


>AF016449-4|AAG23998.3|  330|Caenorhabditis elegans Serpentine
           receptor, class t protein16 protein.
          Length = 330

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 39  HINYFHYYNLTWIICARFLYMGYIA 113
           +I+  HY+N   +I    L+ GYIA
Sbjct: 207 YISTIHYFNNFSVIICTVLFYGYIA 231


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,144,446
Number of Sequences: 27780
Number of extensions: 143219
Number of successful extensions: 430
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 430
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 302276744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)