Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_J17
         (297 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    24   0.34 
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              23   1.1  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    21   2.4  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    21   2.4  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   3.2  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           20   5.6  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    20   7.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    19   9.8  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 24.2 bits (50), Expect = 0.34
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -3

Query: 196 FHPLSSRNKFAL 161
           FHPLSSR +FA+
Sbjct: 276 FHPLSSRREFAV 287


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 153 IENNANLFLDDNGWNKV 203
           I   A +FLD+NG NK+
Sbjct: 84  IREIAEIFLDENGVNKL 100


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 2.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 189 RYRQEINSRC 160
           RYRQE+  RC
Sbjct: 342 RYRQELQKRC 351


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 2.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 189 RYRQEINSRC 160
           RYRQE+  RC
Sbjct: 342 RYRQELQKRC 351


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.0 bits (42), Expect = 3.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 222 RMDPNSEWLPNSIPFGQPL 278
           RMD ++ +L   + FG+PL
Sbjct: 458 RMDRDAVYLQPGMSFGEPL 476


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 196 FHPLSSRNKFAL 161
           FHP+SS  +FA+
Sbjct: 393 FHPMSSFREFAV 404


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
 Frame = -1

Query: 261 VLNSVTILNWDPFGTVPVLRLCSIR-YRQEINSRCFLSAFCILYSCR*PDRLYNPCIR 91
           V  +VT L W   G  PV+  C  R +R     R F+   C     R   R Y P  R
Sbjct: 371 VFAAVTWLGWINSGMNPVIYACWSRDFR-----RAFVRILCACCPGR-VRRRYQPAFR 422


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 235 IQNGYRIQYPLD 270
           I+ GYR+  P+D
Sbjct: 851 IEKGYRLPAPMD 862


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,947
Number of Sequences: 438
Number of extensions: 2152
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6119169
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)