Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_J16
         (650 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_08_0033 + 27820563-27823482,27823593-27823996                       30   1.8  
08_01_0914 + 9010613-9013316,9013537-9013748                           30   1.8  
06_03_0499 + 21461608-21463427,21463517-21463627,21463867-214641...    28   7.4  
12_02_1069 + 25801309-25801433,25802429-25802620,25803130-258031...    27   9.8  
06_03_0793 + 24662506-24663512,24664470-24664787,24664996-246653...    27   9.8  
01_01_1166 + 9287840-9288040,9289752-9289799,9292166-9292282,929...    27   9.8  

>11_08_0033 + 27820563-27823482,27823593-27823996
          Length = 1107

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 61  GVTENVSLQDKRCRRSVCGAPEKGFIPFP 147
           GV  N++L+  R    +CG+P  G +P P
Sbjct: 709 GVFSNITLKSLRGNAGLCGSPRLGLLPCP 737


>08_01_0914 + 9010613-9013316,9013537-9013748
          Length = 971

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 14/44 (31%), Positives = 28/44 (63%)
 Frame = -1

Query: 635 IHILLFFLYNSIINSLCIVKNTVWHFSAINLK*SVHINEELWIN 504
           +H+L+F +  ++I+S+C +  T + F    +K +V  NE L++N
Sbjct: 656 LHVLIFCIVGTLISSMCCM--TAYCFIKRKMKLNVVDNENLFLN 697


>06_03_0499 +
           21461608-21463427,21463517-21463627,21463867-21464143,
           21464265-21464353,21464508-21464595,21464698-21464907,
           21464985-21465110,21465429-21465620,21466532-21467188
          Length = 1189

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = -2

Query: 406 TSESGTLVEGFKVFSIVEQVEKSNSLFP*LLVEDGELIVLGKITDSVQF 260
           +S +G +   FK+ +++E   K   +   L  EDG++++  K  DS+ F
Sbjct: 599 SSSNGPVEREFKILNLLEFNSKRKRMSVILKDEDGQILLFCKGADSIIF 647


>12_02_1069 +
           25801309-25801433,25802429-25802620,25803130-25803159,
           25803426-25803500,25803599-25804373,25804549-25804614,
           25804746-25804811,25804898-25805140,25805407-25805502
          Length = 555

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 391 CRFRSCAPKLRDSSCTHIILQLSSAMILMDSFNQLLMK 504
           C F + A  +  S+CTH   QLSSA +L     +  +K
Sbjct: 69  CSF-AVATSISSSTCTHFTPQLSSAHLLSSQLKEKELK 105


>06_03_0793 + 24662506-24663512,24664470-24664787,24664996-24665323,
            24665465-24665887,24665960-24666252,24666332-24666605,
            24666856-24667358,24667464-24667785,24667875-24668220,
            24668339-24668997,24669524-24669625,24669656-24670052,
            24670155-24670270,24670360-24670386
          Length = 1704

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 442  IILQLSSAMILMDSFNQLLMKFIHNSSL 525
            ++  LS A+ +MDS  QL MKF+    L
Sbjct: 1076 LLENLSVAIFVMDSLRQLAMKFLEREEL 1103


>01_01_1166 +
           9287840-9288040,9289752-9289799,9292166-9292282,
           9293018-9293700,9295214-9297190,9298330-9298441,
           9299848-9299904
          Length = 1064

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 19/63 (30%), Positives = 30/63 (47%)
 Frame = -1

Query: 506 NFIRSWLNESMSIIALDNCNIICVQELSLNLGAHERKRHSCRRFQSL*HSRTSGKEQ*PL 327
           NFI    N S SI   D      ++ LS+++G  + +  SCR    L      G ++ P+
Sbjct: 592 NFISLLGNYSYSITGHDK-----IRRLSIHVGGGKEQDFSCRNLSHLRSLTILGCKEKPI 646

Query: 326 PLA 318
           P+A
Sbjct: 647 PIA 649


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,634,204
Number of Sequences: 37544
Number of extensions: 328647
Number of successful extensions: 786
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)