Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_J13
         (696 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98877-4|CAB54473.2|  796|Caenorhabditis elegans Hypothetical pr...    25   0.99 
Z98877-5|CAD56616.1|  731|Caenorhabditis elegans Hypothetical pr...    25   1.00 
U88176-2|AAO91740.3|  550|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z82078-9|CAE11308.1|  949|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z82078-8|CAB04948.2|  947|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AL023844-13|CAE11312.1|  949|Caenorhabditis elegans Hypothetical...    29   4.2  
AL023844-12|CAA19535.2|  947|Caenorhabditis elegans Hypothetical...    29   4.2  
U28928-7|AAA68339.1|  665|Caenorhabditis elegans Peroxisomal mem...    28   5.5  
AF047657-7|AAK18943.1|  424|Caenorhabditis elegans Hypothetical ...    28   7.3  
Z98866-1|CAB11558.1|  416|Caenorhabditis elegans Hypothetical pr...    27   9.7  

>Z98877-4|CAB54473.2|  796|Caenorhabditis elegans Hypothetical
           protein Y69H2.3b protein.
          Length = 796

 Score = 25.0 bits (52), Expect(2) = 0.99
 Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
 Frame = +3

Query: 453 CATLKCSCGMNPSRTVIGLRSA-CPMEMRC 539
           CAT++CS G      ++    A CP    C
Sbjct: 381 CATMRCSAGTTCQEALVKCAKAPCPSHAAC 410



 Score = 24.2 bits (50), Expect(2) = 0.99
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 435 NVYHTKCATLKCSCG 479
           N+  T C+T+KCS G
Sbjct: 335 NIQITPCSTMKCSAG 349


>Z98877-5|CAD56616.1|  731|Caenorhabditis elegans Hypothetical
           protein Y69H2.3c protein.
          Length = 731

 Score = 25.0 bits (52), Expect(2) = 1.00
 Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
 Frame = +3

Query: 453 CATLKCSCGMNPSRTVIGLRSA-CPMEMRC 539
           CAT++CS G      ++    A CP    C
Sbjct: 316 CATMRCSAGTTCQEALVKCAKAPCPSHAAC 345



 Score = 24.2 bits (50), Expect(2) = 1.00
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 435 NVYHTKCATLKCSCG 479
           N+  T C+T+KCS G
Sbjct: 270 NIQITPCSTMKCSAG 284


>U88176-2|AAO91740.3|  550|Caenorhabditis elegans Hypothetical
           protein F18F11.4 protein.
          Length = 550

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
 Frame = +2

Query: 215 MVVIDWRKGVRRSLSEDDKYSYFTEDVDLNTYMYYLHMN--YPYWMTDEVYGLNKERQGE 388
           +V  D     R  LSED  + + T ++  +  +YYLH+     + +   V   N      
Sbjct: 384 VVHFDMHSVYRNELSEDKTHQHTTIEIYDSLNLYYLHLRRFERHLLNPPVVKYNNRFNSS 443

Query: 389 ILMYANSQLLARL--RME 436
           +LM  N+++L +   RME
Sbjct: 444 LLMKLNTKMLDQFTERME 461


>Z82078-9|CAE11308.1|  949|Caenorhabditis elegans Hypothetical protein
            Y48A6B.11b protein.
          Length = 949

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +2

Query: 224  IDWRKGVRRSLSEDDKYSYFTEDVDLNTY-MYYLHMNYPYWMTDEVYGLNKERQGEILM 397
            +D+R  VRR L + +K  Y  + V +      Y + N      +EVY   KE+ G++++
Sbjct: 881  LDYRYDVRRGLPDAEKQKYQWQQVQMTVIAARYANKNL-INEANEVYATEKEKLGQMVL 938


>Z82078-8|CAB04948.2|  947|Caenorhabditis elegans Hypothetical protein
            Y48A6B.11a protein.
          Length = 947

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +2

Query: 224  IDWRKGVRRSLSEDDKYSYFTEDVDLNTY-MYYLHMNYPYWMTDEVYGLNKERQGEILM 397
            +D+R  VRR L + +K  Y  + V +      Y + N      +EVY   KE+ G++++
Sbjct: 879  LDYRYDVRRGLPDAEKQKYQWQQVQMTVIAARYANKNL-INEANEVYATEKEKLGQMVL 936


>AL023844-13|CAE11312.1|  949|Caenorhabditis elegans Hypothetical
            protein Y48A6B.11b protein.
          Length = 949

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +2

Query: 224  IDWRKGVRRSLSEDDKYSYFTEDVDLNTY-MYYLHMNYPYWMTDEVYGLNKERQGEILM 397
            +D+R  VRR L + +K  Y  + V +      Y + N      +EVY   KE+ G++++
Sbjct: 881  LDYRYDVRRGLPDAEKQKYQWQQVQMTVIAARYANKNL-INEANEVYATEKEKLGQMVL 938


>AL023844-12|CAA19535.2|  947|Caenorhabditis elegans Hypothetical
            protein Y48A6B.11a protein.
          Length = 947

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +2

Query: 224  IDWRKGVRRSLSEDDKYSYFTEDVDLNTY-MYYLHMNYPYWMTDEVYGLNKERQGEILM 397
            +D+R  VRR L + +K  Y  + V +      Y + N      +EVY   KE+ G++++
Sbjct: 879  LDYRYDVRRGLPDAEKQKYQWQQVQMTVIAARYANKNL-INEANEVYATEKEKLGQMVL 936


>U28928-7|AAA68339.1|  665|Caenorhabditis elegans Peroxisomal
           membrane protein relatedprotein 1 protein.
          Length = 665

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +2

Query: 542 VRQNNFVPVTSENLKLKMLLD-DVEQMIREGILTGKIERRDG 664
           +R     P TS ++K+K + D D+EQM+    LT  +ER  G
Sbjct: 525 LRDQVIYPDTSFDMKMKGMSDKDLEQMLENVQLTNILEREGG 566


>AF047657-7|AAK18943.1|  424|Caenorhabditis elegans Hypothetical
           protein F37B4.7 protein.
          Length = 424

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = +2

Query: 224 IDWRKGVRRSLSEDDKYSYFTEDVDLNTYMYYLHM 328
           ++W++   + L +++      E VD ++YM YL M
Sbjct: 183 VEWKEAYEKKLEDNNVQGNLKEIVDQSSYMDYLRM 217


>Z98866-1|CAB11558.1|  416|Caenorhabditis elegans Hypothetical
           protein Y49E10.1 protein.
          Length = 416

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +2

Query: 128 NKAFMMKMTKAATDPVLMNYYGIKVTDKSMVVIDWRKGVRR 250
           +K    K+T+ + +  L  Y+  KV D    V D  + VRR
Sbjct: 14  SKPTAQKLTEESDEKTLRKYFSTKVDDAQQKVADKSQNVRR 54


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,611,008
Number of Sequences: 27780
Number of extensions: 291944
Number of successful extensions: 815
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)