Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_J12
(280 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54575| Best HMM Match : S10_plectin (HMM E-Value=0) 146 2e-36
SB_4255| Best HMM Match : rve (HMM E-Value=1.4e-38) 27 2.3
SB_40554| Best HMM Match : Integrase_Zn (HMM E-Value=0.79) 26 4.1
SB_22863| Best HMM Match : Integrase_Zn (HMM E-Value=0.79) 26 4.1
SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13) 26 5.4
SB_58675| Best HMM Match : RVT_1 (HMM E-Value=0) 26 5.4
SB_56818| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19) 26 5.4
SB_54883| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_52251| Best HMM Match : rve (HMM E-Value=1.1e-34) 26 5.4
SB_50945| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_49359| Best HMM Match : rve (HMM E-Value=5.5e-37) 26 5.4
SB_40370| Best HMM Match : rve (HMM E-Value=1.3e-37) 26 5.4
SB_39098| Best HMM Match : EGF (HMM E-Value=5.2e-07) 26 5.4
SB_22156| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_16047| Best HMM Match : rve (HMM E-Value=2e-12) 26 5.4
SB_15656| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_13442| Best HMM Match : rve (HMM E-Value=2.3e-13) 26 5.4
SB_12635| Best HMM Match : Chlam_PMP (HMM E-Value=0.018) 26 5.4
SB_42915| Best HMM Match : rve (HMM E-Value=1.4e-38) 26 5.4
SB_31504| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_19168| Best HMM Match : rve (HMM E-Value=3.9e-38) 26 5.4
SB_17252| Best HMM Match : Integrase_Zn (HMM E-Value=0.96) 26 5.4
SB_16657| Best HMM Match : RVT_1 (HMM E-Value=6.4e-18) 26 5.4
SB_14976| Best HMM Match : rve (HMM E-Value=1.3e-38) 26 5.4
SB_10363| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_10281| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_9047| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19) 26 5.4
SB_57804| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.1
SB_47935| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.1
SB_7865| Best HMM Match : Mucin (HMM E-Value=1.2) 25 7.1
SB_42720| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.1
>SB_54575| Best HMM Match : S10_plectin (HMM E-Value=0)
Length = 166
Score = 146 bits (354), Expect = 2e-36
Identities = 63/86 (73%), Positives = 75/86 (87%)
Frame = +1
Query: 22 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 201
ML+PK+NRV IYEYLFKEGV VAKKD+++PKH +E +PNL VIKA+QSLKSRGYV+E+F
Sbjct: 1 MLIPKKNRVIIYEYLFKEGVCVAKKDFNSPKHTQIENVPNLHVIKALQSLKSRGYVEEKF 60
Query: 202 AWRHFYWYLTNEGIEYLRIFLHLPPE 279
W+H+YW LTNEGI YLR FLHLP E
Sbjct: 61 CWKHYYWNLTNEGITYLRDFLHLPTE 86
>SB_4255| Best HMM Match : rve (HMM E-Value=1.4e-38)
Length = 899
Score = 27.1 bits (57), Expect = 2.3
Identities = 9/33 (27%), Positives = 23/33 (69%)
Frame = +1
Query: 4 ESWLSKMLMPKQNRVSIYEYLFKEGVMVAKKDY 102
E W++ L+ ++NR+ + E L+K+ +++A + +
Sbjct: 491 ELWIAGQLVMRRNRIVLPESLWKQAIILAHEGH 523
>SB_40554| Best HMM Match : Integrase_Zn (HMM E-Value=0.79)
Length = 207
Score = 26.2 bits (55), Expect = 4.1
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = +1
Query: 4 ESWLSKMLMPKQNRVSIYEYLFKEGVMVAKKDY 102
E W++ L+ + NR+ + E L+K+ +++A + +
Sbjct: 92 EMWIAGQLVMRGNRIVLPESLWKQAIILAHEGH 124
>SB_22863| Best HMM Match : Integrase_Zn (HMM E-Value=0.79)
Length = 135
Score = 26.2 bits (55), Expect = 4.1
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = +1
Query: 4 ESWLSKMLMPKQNRVSIYEYLFKEGVMVAKKDY 102
E W++ L+ + NR+ + E L+K+ +++A + +
Sbjct: 42 EMWIAGQLVMRGNRIVLPESLWKQAIILAHEGH 74
>SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13)
Length = 1072
Score = 25.8 bits (54), Expect = 5.4
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +1
Query: 124 LEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGI 243
LE I +Q + + ++R + ++ RHFYW L+ +
Sbjct: 11 LETIARIQGCRIVNQFQNRRHAS-RYTKRHFYWSLSANAV 49
>SB_58675| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 2353
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = +1
Query: 4 ESWLSKMLMPKQNRVSIYEYLFKEGVMVAKKDY 102
E W++ L+ + NR+ + E L+K+ +++A + +
Sbjct: 2162 ELWIAGQLVMRGNRIVLPESLWKQAIILAHEGH 2194
>SB_56818| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19)
Length = 796
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = +1
Query: 4 ESWLSKMLMPKQNRVSIYEYLFKEGVMVAKKDY 102
E W++ L+ + NR+ + E L+K+ +++A + +
Sbjct: 720 ELWIAGQLVMRGNRIVLPESLWKQAIILAHEGH 752
>SB_54883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2070
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = +1
Query: 46 VSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPN 141
++ +++L K + + APK ++EK+PN
Sbjct: 1395 IADFDFLSKSAIQALRLPVPAPKVNNMEKVPN 1426
>SB_52251| Best HMM Match : rve (HMM E-Value=1.1e-34)
Length = 863
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = +1
Query: 4 ESWLSKMLMPKQNRVSIYEYLFKEGVMVAKKDY 102
E W++ L+ + NR+ + E L+K+ +++A + +
Sbjct: 458 ELWIAGQLVMRGNRIVLPESLWKQAIILAHEGH 490
>SB_50945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 896
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = +1
Query: 4 ESWLSKMLMPKQNRVSIYEYLFKEGVMVAKKDY 102
E W++ L+ + NR+ + E L+K+ +++A + +
Sbjct: 414 ELWIAGQLVMRGNRIVLPESLWKQAIILAHEGH 446
>SB_49359| Best HMM Match : rve (HMM E-Value=5.5e-37)
Length = 971
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = +1
Query: 4 ESWLSKMLMPKQNRVSIYEYLFKEGVMVAKKDY 102
E W++ L+ + NR+ + E L+K+ +++A + +
Sbjct: 625 ELWIAGQLVMRGNRIVLPESLWKQAIILAHEGH 657
>SB_40370| Best HMM Match : rve (HMM E-Value=1.3e-37)
Length = 1393
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = +1
Query: 4 ESWLSKMLMPKQNRVSIYEYLFKEGVMVAKKDY 102
E W++ L+ + NR+ + E L+K+ +++A + +
Sbjct: 985 ELWIAGQLVMRGNRIVLPESLWKQAIILAHEGH 1017
>SB_39098| Best HMM Match : EGF (HMM E-Value=5.2e-07)
Length = 577
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = +1
Query: 4 ESWLSKMLMPKQNRVSIYEYLFKEGVMVAKKDY 102
E W++ L+ + NR+ + E L+K+ +++A + +
Sbjct: 462 ELWIAGQLVMRGNRIVLPESLWKQAIILAHEGH 494
>SB_22156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1551
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = +1
Query: 4 ESWLSKMLMPKQNRVSIYEYLFKEGVMVAKKDY 102
E W++ L+ + NR+ + E L+K+ +++A + +
Sbjct: 1175 ELWIAGQLVMRGNRIVLPESLWKQAIILAHEGH 1207
>SB_16047| Best HMM Match : rve (HMM E-Value=2e-12)
Length = 233
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = +1
Query: 4 ESWLSKMLMPKQNRVSIYEYLFKEGVMVAKKDY 102
E W++ L+ + NR+ + E L+K+ +++A + +
Sbjct: 42 ELWIAGQLVMRGNRIVLPESLWKQAIILAHEGH 74
>SB_15656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1107
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = +1
Query: 4 ESWLSKMLMPKQNRVSIYEYLFKEGVMVAKKDY 102
E W++ L+ + NR+ + E L+K+ +++A + +
Sbjct: 727 ELWIAGQLVMRGNRIVLPESLWKQAIILAHEGH 759
>SB_13442| Best HMM Match : rve (HMM E-Value=2.3e-13)
Length = 271
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = +1
Query: 4 ESWLSKMLMPKQNRVSIYEYLFKEGVMVAKKDY 102
E W++ L+ + NR+ + E L+K+ +++A + +
Sbjct: 80 ELWIAGQLVMRGNRIVLPESLWKQAIILAHEGH 112
>SB_12635| Best HMM Match : Chlam_PMP (HMM E-Value=0.018)
Length = 3561
Score = 25.8 bits (54), Expect = 5.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 278 SGGKCRKILRYSIPSFVKYQ*KCLHANCSLTY 183
SGG + LRY+ P+ V C A CS+ Y
Sbjct: 3126 SGGNLDRGLRYTAPNGVTVTSSCGLAPCSICY 3157
>SB_42915| Best HMM Match : rve (HMM E-Value=1.4e-38)
Length = 610
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = +1
Query: 4 ESWLSKMLMPKQNRVSIYEYLFKEGVMVAKKDY 102
E W++ L+ + NR+ + E L+K+ +++A + +
Sbjct: 202 ELWIAGQLVMRGNRIVLPESLWKQAIILAHEGH 234
>SB_31504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = +1
Query: 4 ESWLSKMLMPKQNRVSIYEYLFKEGVMVAKKDY 102
E W++ L+ + NR+ + E L+K+ +++A + +
Sbjct: 359 ELWIAGQLVMRGNRIVLPESLWKQAIILAHEGH 391
>SB_19168| Best HMM Match : rve (HMM E-Value=3.9e-38)
Length = 586
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = +1
Query: 4 ESWLSKMLMPKQNRVSIYEYLFKEGVMVAKKDY 102
E W++ L+ + NR+ + E L+K+ +++A + +
Sbjct: 42 ELWIAGQLVMRGNRIVLPESLWKQAIILAHEGH 74
>SB_17252| Best HMM Match : Integrase_Zn (HMM E-Value=0.96)
Length = 391
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = +1
Query: 4 ESWLSKMLMPKQNRVSIYEYLFKEGVMVAKKDY 102
E W++ L+ + NR+ + E L+K+ +++A + +
Sbjct: 276 ELWIAGQLVMRGNRIVLPESLWKQAIILAHEGH 308
>SB_16657| Best HMM Match : RVT_1 (HMM E-Value=6.4e-18)
Length = 1138
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = +1
Query: 4 ESWLSKMLMPKQNRVSIYEYLFKEGVMVAKKDY 102
E W++ L+ + NR+ + E L+K+ +++A + +
Sbjct: 780 ELWIAGQLVMRGNRIVLPESLWKQAIILAHEGH 812
>SB_14976| Best HMM Match : rve (HMM E-Value=1.3e-38)
Length = 1172
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = +1
Query: 4 ESWLSKMLMPKQNRVSIYEYLFKEGVMVAKKDY 102
E W++ L+ + NR+ + E L+K+ +++A + +
Sbjct: 855 ELWIAGQLVMRGNRIVLPESLWKQAIILAHEGH 887
>SB_10363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = +1
Query: 4 ESWLSKMLMPKQNRVSIYEYLFKEGVMVAKKDY 102
E W++ L+ + NR+ + E L+K+ +++A + +
Sbjct: 491 ELWIAGQLVMRGNRIVLPESLWKQAIILAHEGH 523
>SB_10281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = +1
Query: 4 ESWLSKMLMPKQNRVSIYEYLFKEGVMVAKKDY 102
E W++ L+ + NR+ + E L+K+ +++A + +
Sbjct: 92 ELWIAGQLVMRGNRIVLPESLWKQAIILAHEGH 124
>SB_9047| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19)
Length = 1116
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = +1
Query: 4 ESWLSKMLMPKQNRVSIYEYLFKEGVMVAKKDY 102
E W++ L+ + NR+ + E L+K+ +++A + +
Sbjct: 750 ELWIAGQLVMRGNRIVLPESLWKQAIILAHEGH 782
>SB_57804| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 55
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 153 DHLEVRDLLEIWMFGCMV 100
DH E L++W FGCM+
Sbjct: 35 DHQEYDYSLDMWSFGCML 52
>SB_47935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -2
Query: 141 VRDLLEIWMFGCMVVFLSYHDSLLEEV 61
+ DL +W+ G + F+ H SLL ++
Sbjct: 56 LEDLSRVWLEGYKISFIEKHKSLLRKL 82
>SB_7865| Best HMM Match : Mucin (HMM E-Value=1.2)
Length = 2527
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +1
Query: 109 PKHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFY 219
P+H D+ +I +L + + S Y QF W + Y
Sbjct: 1797 PRHVDIPEIYHLLIALLLGHPVSEVYAGAQFDWHNLY 1833
>SB_42720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2391
Score = 25.4 bits (53), Expect = 7.1
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 88 AKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGI 243
+K D A H ++ ++ + M+ LK++ + K +F+ RH Y EG+
Sbjct: 1484 SKADMKAILHDYGAELSEEKMKEYMKDLKTKKFSKLEFSLRHTYTIALVEGL 1535
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,604,659
Number of Sequences: 59808
Number of extensions: 151383
Number of successful extensions: 341
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 341
length of database: 16,821,457
effective HSP length: 69
effective length of database: 12,694,705
effective search space used: 291978215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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