BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_J12
(280 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 24 0.94
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 22 3.8
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 22 3.8
AJ459779-1|CAD30839.1| 405|Anopheles gambiae clip-domain serine... 21 6.6
AY748841-1|AAV28189.1| 158|Anopheles gambiae cytochrome P450 pr... 21 8.7
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 21 8.7
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 21 8.7
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 24.2 bits (50), Expect = 0.94
Identities = 11/47 (23%), Positives = 25/47 (53%)
Frame = +1
Query: 112 KHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYL 252
K+ DL+K + A+++ R Y+ + +W++T++ EY+
Sbjct: 1134 KNCDLDKNQRNCIEFALKAKPIRRYIPKHRIQYKVWWFVTSQPFEYM 1180
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 185 MLRNSSHGGIFTGI*QMRVLNTL 253
+L+NSSH G +G+ +V T+
Sbjct: 93 LLKNSSHSGASSGLNTTQVNTTI 115
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = -2
Query: 96 FLSYHDSLLEEVLIDRNTVLFWHQHLGQPTFH 1
FL+YH++ E + NT+ + H + + H
Sbjct: 3086 FLNYHENTPEGEQVHDNTIQRYKSHYKRTSKH 3117
>AJ459779-1|CAD30839.1| 405|Anopheles gambiae clip-domain serine
protease protein.
Length = 405
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 233 FVKYQ*KCLHANCSLTYPLDLSDC 162
FV+ + +H N Y DL DC
Sbjct: 198 FVRLREYNIHTNPDCVYENDLKDC 221
>AY748841-1|AAV28189.1| 158|Anopheles gambiae cytochrome P450
protein.
Length = 158
Score = 21.0 bits (42), Expect = 8.7
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = -2
Query: 87 YHDSLLEEVLIDRNTVLFWHQHL 19
Y DSL+E V R L W L
Sbjct: 2 YVDSLIEHVKAGRGPALEWETAL 24
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 21.0 bits (42), Expect = 8.7
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 106 APKHPDLEKI 135
AP HPD+E+I
Sbjct: 412 APAHPDVEQI 421
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 21.0 bits (42), Expect = 8.7
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 106 APKHPDLEKI 135
AP HPD+E+I
Sbjct: 411 APAHPDVEQI 420
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 290,441
Number of Sequences: 2352
Number of extensions: 5491
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 16604898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -