Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_J10
         (586 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    27   0.15 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.36 
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   1.9  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   4.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   5.8  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   5.8  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   7.7  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 26.6 bits (56), Expect = 0.15
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +1

Query: 220 DQLYR*ILYKVYNIHYFVFVICYRSNAIDAV 312
           +Q+Y   + K YNI YF  ++ Y ++AI+ +
Sbjct: 319 EQVYHLEIEKYYNILYFCRIMVYLNSAINPI 349


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 149 DITNMSGFNVVLGCVMALLIILFTI 223
           D+ N SG+ V   C+   LII  TI
Sbjct: 279 DVGNASGYTVTFLCLYLFLIITLTI 303


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 15/55 (27%), Positives = 26/55 (47%)
 Frame = +2

Query: 149 DITNMSGFNVVLGCVMALLIILFTISSIARYYIKFTIFTILCLLFATAPMPLMLL 313
           DI   +   ++  C+ + L  L+T  +   +   FTI  IL  LF T    L+++
Sbjct: 222 DIFGWTLILILAKCITSSLSSLYTCIAGYEFNANFTISYILFALFNTFGTILLIM 276


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -1

Query: 574 TPQPCSCSKRHQILQRTFRHDRTSRHN 494
           T  P +   RH I +RT     T+ HN
Sbjct: 262 TSSPSNRFTRHLIQRRTHTRHTTTSHN 288


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 13/56 (23%), Positives = 23/56 (41%)
 Frame = +3

Query: 378 LAYDGRCADWRTWIILGDP*YY*ITRVHWIFTS*PYFGRLWRDVRSWRNVRCSIWC 545
           +A+  +   W   ++ GDP    +  ++  F    YF  L +D    R V    +C
Sbjct: 293 VAFRRKIYKWNHGLLQGDPLSGCLCELYMAFMDRLYFSNLDKDAFIHRTVDDYFFC 348


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
 Frame = +2

Query: 212 LFTISSIARYYIKFTIFTILCLLFATAPMPLMLLRPFSPKNALTPAALLRLSARMLGIR- 388
           LF +S     +     +TIL  +F T P  LM    F  ++   P  L  L+  +  +  
Sbjct: 197 LFLLSQAVETFNDIFGWTILQTVFFTVPRVLMYFDIFITEHESKPNWLFFLANFLTNLLF 256

Query: 389 WKVRGLENV 415
           W+   + NV
Sbjct: 257 WEFDQIVNV 265


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 188 CVMALLIILFTISSIARYYIKFTIFTILCL 277
           C + +  I  T + + R+YI +TI  I+ +
Sbjct: 23  CAICVPKITSTNNEVPRWYICYTIGVIITI 52


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,875
Number of Sequences: 336
Number of extensions: 2914
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)