Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_J10
         (586 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73975-1|CAA98276.1|  282|Caenorhabditis elegans Hypothetical pr...    65   4e-11
Z81095-4|CAB03160.1|  262|Caenorhabditis elegans Hypothetical pr...    62   3e-10
Z81089-7|CAB03139.1|  262|Caenorhabditis elegans Hypothetical pr...    62   3e-10
Z35719-6|CAA84795.1| 1253|Caenorhabditis elegans Hypothetical pr...    29   1.8  
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g...    28   4.2  
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ...    28   4.2  
AL117207-9|CAB60400.1|  252|Caenorhabditis elegans Hypothetical ...    28   5.6  
AL021504-1|CAA16428.3|  325|Caenorhabditis elegans Hypothetical ...    28   5.6  
U55366-8|AAZ91347.1|  287|Caenorhabditis elegans Serpentine rece...    27   9.8  

>Z73975-1|CAA98276.1|  282|Caenorhabditis elegans Hypothetical
           protein T06E8.1 protein.
          Length = 282

 Score = 64.9 bits (151), Expect = 4e-11
 Identities = 37/139 (26%), Positives = 67/139 (48%)
 Frame = +2

Query: 170 FNVVLGCVMALLIILFTISSIARYYIKFTIFTILCLLFATAPMPLMLLRPFSPKNALTPA 349
           +++V+  ++++L IL+ IS++  YY++ + +    LL        M+    + K A    
Sbjct: 5   WSIVVFFLLSILFILYNISTVCHYYMRISFYYFTILLHGMEVCVTMIPSWLNGKGADYVF 64

Query: 350 ALLRLSARMLGIRWKVRGLENVDNSRGSVILLNHQSALDLYVLAVLWPIMARCTVVAKRS 529
                  +  G+   V G E       +V++ NHQS+LD+  +A +WP    C V+ KR 
Sbjct: 65  HSFFYWCKWTGVHTTVYGYEKTQVEGPAVVICNHQSSLDILSMASIWP--KNCVVMMKRI 122

Query: 530 LQYLVPFGTATWLWGTVFI 586
           L Y+  F    +   T+FI
Sbjct: 123 LAYVPFFNLGAYFSNTIFI 141


>Z81095-4|CAB03160.1|  262|Caenorhabditis elegans Hypothetical
           protein F59F4.4 protein.
          Length = 262

 Score = 62.1 bits (144), Expect = 3e-10
 Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 2/134 (1%)
 Frame = +2

Query: 191 VMALLIILFTISSIARYYIKFTIFTILCLLFATAPMPLMLLRPF--SPKNALTPAALLRL 364
           V+A+L++L  +  I  +YI+   F  +CL+       L  + PF  SP N      + + 
Sbjct: 9   VIAVLLLLAQLPVIG-FYIRAVYFG-MCLIIGGFLGGLASI-PFGKSPNNHFRMFKIFQA 65

Query: 365 SARMLGIRWKVRGLENVDNSRGSVILLNHQSALDLYVLAVLWPIMARCTVVAKRSLQYLV 544
               +G+R+++R  E + + +  +I+ NHQSALD+  ++  WP+   C V+ K SL+YL 
Sbjct: 66  MTWPMGVRFELRNSEILHDKKPYIIIANHQSALDVLGMSFAWPV--DCVVMLKSSLKYLP 123

Query: 545 PFGTATWLWGTVFI 586
            F    +L  +V+I
Sbjct: 124 GFNLCAYLCDSVYI 137


>Z81089-7|CAB03139.1|  262|Caenorhabditis elegans Hypothetical
           protein F59F4.4 protein.
          Length = 262

 Score = 62.1 bits (144), Expect = 3e-10
 Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 2/134 (1%)
 Frame = +2

Query: 191 VMALLIILFTISSIARYYIKFTIFTILCLLFATAPMPLMLLRPF--SPKNALTPAALLRL 364
           V+A+L++L  +  I  +YI+   F  +CL+       L  + PF  SP N      + + 
Sbjct: 9   VIAVLLLLAQLPVIG-FYIRAVYFG-MCLIIGGFLGGLASI-PFGKSPNNHFRMFKIFQA 65

Query: 365 SARMLGIRWKVRGLENVDNSRGSVILLNHQSALDLYVLAVLWPIMARCTVVAKRSLQYLV 544
               +G+R+++R  E + + +  +I+ NHQSALD+  ++  WP+   C V+ K SL+YL 
Sbjct: 66  MTWPMGVRFELRNSEILHDKKPYIIIANHQSALDVLGMSFAWPV--DCVVMLKSSLKYLP 123

Query: 545 PFGTATWLWGTVFI 586
            F    +L  +V+I
Sbjct: 124 GFNLCAYLCDSVYI 137


>Z35719-6|CAA84795.1| 1253|Caenorhabditis elegans Hypothetical protein
            F17C8.1 protein.
          Length = 1253

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 1/127 (0%)
 Frame = +2

Query: 131  FKGIFIDITNMSGFNVVLGCVMALLIILFTISSIARYYIKFTIFTILCLLFATAPMPLML 310
            + G+FIDI   +   V+ G V  + +  F +S IA  Y  F    IL L      +PL+ 
Sbjct: 770  YSGVFIDIIVATLIFVISGAVAIMSVRPFPLSLIA--YFPFAA-AILILTIVLIGLPLLA 826

Query: 311  -LRPFSPKNALTPAALLRLSARMLGIRWKVRGLENVDNSRGSVILLNHQSALDLYVLAVL 487
              + F   N   P  L+ L    L I   +  +    +   + ++LN++ A   YV   +
Sbjct: 827  RKKSFQCANQWMPRHLIGLLLIFLPIGVAICIMPLCQSGDCANVILNYRLAFS-YV--TI 883

Query: 488  WPIMARC 508
              I A C
Sbjct: 884  LAIFAHC 890


>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
            protein.
          Length = 1492

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +1

Query: 451  PECTGSLRLSRTL--ADYGAMYGRGETFAAVFGA 546
            P  TGS ++ R +  A YGA  G G  F A FGA
Sbjct: 930  PGDTGSYQVPRIVPGAQYGAQAGSGAYFGAQFGA 963


>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
            protein Y53H1C.2a protein.
          Length = 1512

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +1

Query: 451  PECTGSLRLSRTL--ADYGAMYGRGETFAAVFGA 546
            P  TGS ++ R +  A YGA  G G  F A FGA
Sbjct: 950  PGDTGSYQVPRIVPGAQYGAQAGSGAYFGAQFGA 983


>AL117207-9|CAB60400.1|  252|Caenorhabditis elegans Hypothetical
           protein Y60A3A.15 protein.
          Length = 252

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +2

Query: 143 FIDITNMSGFNVVLGCVMALLIILFTISSIARYYIKF-TIFTILCL 277
           F+ + + S FN+   C +  ++IL +  SIAR++  F  +F +L L
Sbjct: 6   FLSVFDTSSFNLYFKCFIYSIVILPSNFSIARFFHCFWVLFWVLQL 51


>AL021504-1|CAA16428.3|  325|Caenorhabditis elegans Hypothetical
           protein Y61B8B.1 protein.
          Length = 325

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 12/58 (20%), Positives = 25/58 (43%)
 Frame = +2

Query: 167 GFNVVLGCVMALLIILFTISSIARYYIKFTIFTILCLLFATAPMPLMLLRPFSPKNAL 340
           G + +LG +  + +++F    +  +     +F ++C          M   P+ P NAL
Sbjct: 20  GISSLLGNIFGIYLLIFQTKELGEFRYYLLLFQVVCTATDLNLTTFMKFLPYYPINAL 77


>U55366-8|AAZ91347.1|  287|Caenorhabditis elegans Serpentine
           receptor, class x protein73 protein.
          Length = 287

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 4/32 (12%)
 Frame = +2

Query: 164 SGFNVVLGCV----MALLIILFTISSIARYYI 247
           S F+V+ G +    +AL++ LFT S I R+Y+
Sbjct: 144 SSFDVLFGAIGFLGIALILNLFTFSKILRFYL 175


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,149,721
Number of Sequences: 27780
Number of extensions: 268944
Number of successful extensions: 743
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)