Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_J08
         (553 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_5496| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   1.9  
SB_58115| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.3  
SB_41854| Best HMM Match : FA_hydroxylase (HMM E-Value=2.8)            29   3.3  
SB_28807| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.7  
SB_15404| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.7  

>SB_5496| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1352

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -1

Query: 214 LYKTGRWFGRDLCPAVDVIRLNGWMDGILWVPL 116
           +Y TG+WF   +   V ++ LN W + I + PL
Sbjct: 332 VYITGKWFNYGIIFIVMILDLNMWKNQIFYEPL 364


>SB_58115| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 275

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +3

Query: 93  VATKEIRANGTHS-IPSIHPFNRMTSTAGHRSLPNQRPV 206
           VA++    NG+HS   +  P  R   T  H++ PN RPV
Sbjct: 72  VASRGALGNGSHSSCLTSQPAVRAIDTGWHKAYPNARPV 110


>SB_41854| Best HMM Match : FA_hydroxylase (HMM E-Value=2.8)
          Length = 476

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 16/56 (28%), Positives = 23/56 (41%)
 Frame = +2

Query: 110 TSQRDPQYSIHPSIQPNDVHCWA*VSPKPTTGFVQTASTRLPRPSSGHRSTLYRGT 277
           T   D  Y +H S        +  V   PTTG++         P+ G+ +  YRGT
Sbjct: 417 TGYIDTYYRVHRSPTTGYFDTYYRVHRHPTTGYIGPLLQGTSTPTKGYIAPYYRGT 472


>SB_28807| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 414

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 147 PFNRMTSTAGHRSLPNQRPVLYKPHPPDSRDLHQVIDPP 263
           P  + TS+ GH++L  Q+ +   PH  D+  L  V++ P
Sbjct: 135 PITKKTSSWGHQNLHLQQFMTMFPHTQDNTFLGFVVEAP 173


>SB_15404| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 240

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -3

Query: 308 KIYSNKTKTFTYLDIRWIDDLMKVAGVWWMRFVQNRSLVWERP 180
           ++YS+   + T+L I      +++   W  RFV   S +W RP
Sbjct: 52  QLYSDPWTSLTHLFIAKAPRRVQLLFGWVFRFVPGDSYIWTRP 94


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,126,560
Number of Sequences: 59808
Number of extensions: 377998
Number of successful extensions: 1030
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1276425465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)