Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_J08
(553 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongatio... 30 4.7
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ... 30 4.7
AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongatio... 30 4.7
AF401656-1|AAK94066.1| 1462|Homo sapiens MAGI-1C beta protein. 30 6.2
X56092-1|CAA39572.1| 392|Homo sapiens serine--pyruvate aminotr... 29 8.2
X53414-1|CAA37493.1| 392|Homo sapiens L- alanine:glyoxylate ami... 29 8.2
M61763-1|AAA51680.1| 392|Homo sapiens alanine:glyoxylate aminot... 29 8.2
D13368-1|BAA02632.1| 392|Homo sapiens alanine:glyoxylate aminot... 29 8.2
BC132819-1|AAI32820.1| 392|Homo sapiens AGXT protein protein. 29 8.2
AF348451-1|AAK30157.1| 361|Homo sapiens hepatic peroxysomal ala... 29 8.2
AC104809-2|AAY24168.1| 392|Homo sapiens unknown protein. 29 8.2
AB292648-1|BAF46862.1| 392|Homo sapiens alanine:glyoxylate amin... 29 8.2
>BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongation
regulator 1 protein.
Length = 1077
Score = 30.3 bits (65), Expect = 4.7
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = -2
Query: 219 AVCTKPVVGLGETYAQQWTSFG*MDGWMEYCGSRWLVSPWWPP 91
A+ P G T +WT + DG Y +R L S W P
Sbjct: 397 AIAASPATLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKP 439
>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
factor CA150 protein.
Length = 1098
Score = 30.3 bits (65), Expect = 4.7
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = -2
Query: 219 AVCTKPVVGLGETYAQQWTSFG*MDGWMEYCGSRWLVSPWWPP 91
A+ P G T +WT + DG Y +R L S W P
Sbjct: 418 AIAASPATLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKP 460
>AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongation
regulator 1 variant protein.
Length = 1081
Score = 30.3 bits (65), Expect = 4.7
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = -2
Query: 219 AVCTKPVVGLGETYAQQWTSFG*MDGWMEYCGSRWLVSPWWPP 91
A+ P G T +WT + DG Y +R L S W P
Sbjct: 401 AIAASPATLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKP 443
>AF401656-1|AAK94066.1| 1462|Homo sapiens MAGI-1C beta protein.
Length = 1462
Score = 29.9 bits (64), Expect = 6.2
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +2
Query: 119 RDPQYSIHPSIQPNDVHCWA*VSPKPTTG 205
RDP+ S S QPN+ H W S KP +G
Sbjct: 1264 RDPKGSREYSRQPNEHHTWNGTSRKPDSG 1292
>X56092-1|CAA39572.1| 392|Homo sapiens serine--pyruvate
aminotransferase protein.
Length = 392
Score = 29.5 bits (63), Expect = 8.2
Identities = 12/19 (63%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
Frame = -3
Query: 308 KIYSNKTKTFT-YLDIRWI 255
K+YS KTK F+ YLDI+W+
Sbjct: 229 KMYSRKTKPFSFYLDIKWL 247
>X53414-1|CAA37493.1| 392|Homo sapiens L- alanine:glyoxylate
aminotransferase protein.
Length = 392
Score = 29.5 bits (63), Expect = 8.2
Identities = 12/19 (63%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
Frame = -3
Query: 308 KIYSNKTKTFT-YLDIRWI 255
K+YS KTK F+ YLDI+W+
Sbjct: 229 KMYSRKTKPFSFYLDIKWL 247
>M61763-1|AAA51680.1| 392|Homo sapiens alanine:glyoxylate
aminotransferase protein.
Length = 392
Score = 29.5 bits (63), Expect = 8.2
Identities = 12/19 (63%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
Frame = -3
Query: 308 KIYSNKTKTFT-YLDIRWI 255
K+YS KTK F+ YLDI+W+
Sbjct: 229 KMYSRKTKPFSFYLDIKWL 247
>D13368-1|BAA02632.1| 392|Homo sapiens alanine:glyoxylate
aminotransferase protein.
Length = 392
Score = 29.5 bits (63), Expect = 8.2
Identities = 12/19 (63%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
Frame = -3
Query: 308 KIYSNKTKTFT-YLDIRWI 255
K+YS KTK F+ YLDI+W+
Sbjct: 229 KMYSRKTKPFSFYLDIKWL 247
>BC132819-1|AAI32820.1| 392|Homo sapiens AGXT protein protein.
Length = 392
Score = 29.5 bits (63), Expect = 8.2
Identities = 12/19 (63%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
Frame = -3
Query: 308 KIYSNKTKTFT-YLDIRWI 255
K+YS KTK F+ YLDI+W+
Sbjct: 229 KMYSRKTKPFSFYLDIKWL 247
>AF348451-1|AAK30157.1| 361|Homo sapiens hepatic peroxysomal
alanine:glyoxylate aminotransferase protein.
Length = 361
Score = 29.5 bits (63), Expect = 8.2
Identities = 12/19 (63%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
Frame = -3
Query: 308 KIYSNKTKTFT-YLDIRWI 255
K+YS KTK F+ YLDI+W+
Sbjct: 199 KMYSRKTKPFSFYLDIKWL 217
>AC104809-2|AAY24168.1| 392|Homo sapiens unknown protein.
Length = 392
Score = 29.5 bits (63), Expect = 8.2
Identities = 12/19 (63%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
Frame = -3
Query: 308 KIYSNKTKTFT-YLDIRWI 255
K+YS KTK F+ YLDI+W+
Sbjct: 229 KMYSRKTKPFSFYLDIKWL 247
>AB292648-1|BAF46862.1| 392|Homo sapiens alanine:glyoxylate
aminotransferase protein.
Length = 392
Score = 29.5 bits (63), Expect = 8.2
Identities = 12/19 (63%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
Frame = -3
Query: 308 KIYSNKTKTFT-YLDIRWI 255
K+YS KTK F+ YLDI+W+
Sbjct: 229 KMYSRKTKPFSFYLDIKWL 247
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,576,448
Number of Sequences: 237096
Number of extensions: 1881121
Number of successful extensions: 3506
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3506
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5477474182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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