Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_J07
         (535 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   3.0  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   3.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   3.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.0  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 409 RLARYYKTKSVLPPNWK 459
           RL  Y  T+SVL  +WK
Sbjct: 159 RLRMYINTESVLDGDWK 175


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -2

Query: 225 LCNTMRVPEHDTDLGRSKTLFAKFEDLFL 139
           +CN+    E +T     +T+FA F D  +
Sbjct: 444 ICNSFTKFEFNTVFNDQRTVFANFYDAMI 472


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +3

Query: 3   RCQIGDIIKSRQYGSYARTWQGYIPVGAAVPPQCP 107
           RC  G+ + S +  +  R      PVG A+PP  P
Sbjct: 97  RCPSGESMLSER-AALLRGVPTLSPVGVALPPTLP 130


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 13/44 (29%), Positives = 16/44 (36%)
 Frame = +3

Query: 198  AQGLSWCCTSQICYW*KDPAYHESYGSCS*STGRFVLPDQEGCR 329
            A GL W    +IC W K     E       ST  +  P +   R
Sbjct: 1132 AGGLHWNKERKICDWPKSAKCEEKKPGHKPSTSSWQKPTKPSYR 1175


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,852
Number of Sequences: 336
Number of extensions: 2680
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)