Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_J06
         (592 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99288-6|CAB16549.2|  286|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z77656-1|CAB01141.2|  350|Caenorhabditis elegans Hypothetical pr...    28   4.3  
Z70682-9|CAA94587.2|  460|Caenorhabditis elegans Hypothetical pr...    28   4.3  
Z70680-9|CAA94576.2|  460|Caenorhabditis elegans Hypothetical pr...    28   4.3  
Z81458-6|CAB03826.2|  328|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z77656-6|CAB01142.2|  328|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z79752-4|CAB02083.1| 1188|Caenorhabditis elegans Hypothetical pr...    27   7.5  
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr...    27   7.5  
Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical p...    27   10.0 

>Z99288-6|CAB16549.2|  286|Caenorhabditis elegans Hypothetical
           protein ZK262.7 protein.
          Length = 286

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +2

Query: 506 NTCFNKATFPL-IISLVGYQKWESM 577
           NTCFN  T+PL +   V    WESM
Sbjct: 85  NTCFNSYTYPLNVARFVQDVSWESM 109


>Z77656-1|CAB01141.2|  350|Caenorhabditis elegans Hypothetical
           protein F07B10.2 protein.
          Length = 350

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 178 LP*CYCTCYSSKFELCLITYLFRF 107
           +P  YC CY+  F L  + +L+R+
Sbjct: 93  IPTTYCWCYAMSFSLFALQFLYRY 116


>Z70682-9|CAA94587.2|  460|Caenorhabditis elegans Hypothetical
           protein C25G4.1 protein.
          Length = 460

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -3

Query: 134 VLDNLLVPFFRLGDKDRIDLFSRSVPKALCLVSPLPPKAP 15
           ++DN LV  F+   K +   F     KALC   P+PP+ P
Sbjct: 403 IVDNWLVELFQNTGKTQ-PTFCYHYRKALCKYCPVPPEIP 441


>Z70680-9|CAA94576.2|  460|Caenorhabditis elegans Hypothetical
           protein C25G4.1 protein.
          Length = 460

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -3

Query: 134 VLDNLLVPFFRLGDKDRIDLFSRSVPKALCLVSPLPPKAP 15
           ++DN LV  F+   K +   F     KALC   P+PP+ P
Sbjct: 403 IVDNWLVELFQNTGKTQ-PTFCYHYRKALCKYCPVPPEIP 441


>Z81458-6|CAB03826.2|  328|Caenorhabditis elegans Hypothetical
           protein F07B10.3 protein.
          Length = 328

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 178 LP*CYCTCYSSKFELCLITYLFRF 107
           +P  YC CY+  F L  + +L+R+
Sbjct: 93  VPTTYCWCYAMSFSLFALQFLYRY 116


>Z77656-6|CAB01142.2|  328|Caenorhabditis elegans Hypothetical
           protein F07B10.3 protein.
          Length = 328

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 178 LP*CYCTCYSSKFELCLITYLFRF 107
           +P  YC CY+  F L  + +L+R+
Sbjct: 93  VPTTYCWCYAMSFSLFALQFLYRY 116


>Z79752-4|CAB02083.1| 1188|Caenorhabditis elegans Hypothetical
           protein D2005.4 protein.
          Length = 1188

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = -3

Query: 251 FGRFRSLATHSPARADVPRRCQAVVTIVLLYVLFIEIRIVLDNLLVPFF-RLGDKDRIDL 75
           FG F S A H+P     P+  + +   +      I+IR++ +   +  F  L +K RI +
Sbjct: 377 FGEFLSTALHAPELFKTPKHLKLIYDQLEKMTKSIDIRVLSEEEAMSLFDELREKPRISM 436


>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
            C41A3.1 protein.
          Length = 7829

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -3

Query: 473  YVPA*KYWILYVQNSTYISVNKTHYCLLT*IPLT 372
            Y+P  KY+IL +     IS++     +L+ IPLT
Sbjct: 2293 YIPIHKYYILPISAKNQISLDNLEKQILSVIPLT 2326


>Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical
            protein F40G12.3 protein.
          Length = 1099

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +1

Query: 52   AFGTDRLNRSMRSLSPSRKNGTSKLSSTIRISMNSTYNNTMVT 180
            AFGT   N S+  LSP     T + ++T   S  S  N T ++
Sbjct: 943  AFGTKTANSSVAELSPRTTVNTGESATTKATSPTSGGNTTTIS 985


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,437,333
Number of Sequences: 27780
Number of extensions: 269365
Number of successful extensions: 655
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)