BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_J06
(592 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 1.7
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 1.7
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 1.7
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 1.7
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 23 1.7
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 23 1.7
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 23 2.2
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 23 2.2
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 22 3.9
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 22 3.9
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 3.9
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 22 3.9
EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate c... 21 6.8
DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein. 21 9.0
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.4 bits (48), Expect = 1.7
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -1
Query: 199 LAAVRPWLP*CYCTCYSSKFELCLITYLFR 110
L A+ W C C Y+S E + Y+ R
Sbjct: 360 LTAMNVWDGVCMCFIYASLLEFVCVNYVGR 389
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.4 bits (48), Expect = 1.7
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -1
Query: 199 LAAVRPWLP*CYCTCYSSKFELCLITYLFR 110
L A+ W C C Y+S E + Y+ R
Sbjct: 329 LTAMNVWDGVCMCFIYASLLEFVCVNYVGR 358
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.4 bits (48), Expect = 1.7
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -1
Query: 199 LAAVRPWLP*CYCTCYSSKFELCLITYLFR 110
L A+ W C C Y+S E + Y+ R
Sbjct: 380 LTAMNVWDGVCMCFIYASLLEFVCVNYVGR 409
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.4 bits (48), Expect = 1.7
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -1
Query: 199 LAAVRPWLP*CYCTCYSSKFELCLITYLFR 110
L A+ W C C Y+S E + Y+ R
Sbjct: 329 LTAMNVWDGVCMCFIYASLLEFVCVNYVGR 358
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3
Query: 101 LGDKDRIDLFSRSVP 57
L DK R D F+R+VP
Sbjct: 106 LSDKTRFDYFARTVP 120
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3
Query: 101 LGDKDRIDLFSRSVP 57
L DK R D F+R+VP
Sbjct: 196 LSDKTRFDYFARTVP 210
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 23.0 bits (47), Expect = 2.2
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 454 YFQAGTYTYYHYTRSPREYV 513
YF G ++Y H SP ++V
Sbjct: 91 YFYNGKHSYLHTITSPNKFV 110
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 23.0 bits (47), Expect = 2.2
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 7 WCCGALGGSG 36
WCC LGG G
Sbjct: 14 WCCDNLGGPG 23
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 22.2 bits (45), Expect = 3.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 77 LFSRSVPKALCLVSPLPPK 21
LFS +V L L+S LPP+
Sbjct: 92 LFSLAVSDLLLLISGLPPE 110
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 22.2 bits (45), Expect = 3.9
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 37 LTRHRAFGTDRLNRSMRSLSPSRKNGTSKLSSTIRISM 150
LTR+ TD+L ++ R L ++ L S + IS+
Sbjct: 355 LTRNLELLTDKLQQTYRELDGEKQKTDRLLYSVLPISV 392
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.2 bits (45), Expect = 3.9
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -1
Query: 565 FLVTNQAYN*GESRFVKARIPVGFVCNDSRYTYPLENTG 449
F T N GE ++ +P G + + R++YP E G
Sbjct: 588 FSFTKLPMNAGEFANLQCIVPTGDLPLNIRWSYPGEEMG 626
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 22.2 bits (45), Expect = 3.9
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 37 LTRHRAFGTDRLNRSMRSLSPSRKNGTSKLSSTIRISM 150
LTR+ TD+L ++ R L ++ L S + IS+
Sbjct: 355 LTRNLELLTDKLQQTYRELDGEKQKTDRLLYSVLPISV 392
>EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate
carboxykinase protein.
Length = 118
Score = 21.4 bits (43), Expect = 6.8
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -2
Query: 300 GCAAGTSFASNPRA 259
G A GTS A+NP A
Sbjct: 68 GVAPGTSSATNPNA 81
>DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein.
Length = 135
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 359 YCITMLKEFMLIDNN 403
YC +LK F ++D N
Sbjct: 62 YCECILKNFNILDKN 76
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,699
Number of Sequences: 438
Number of extensions: 3403
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -